iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cpo-021980

Ensembl Protein ID

ENSCPOP00000007856.2

UniProt Accession

H0VD18; H0VD18_CAVPO

Genbank Protein ID

ENSCPOP00000007856

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02021502

Gene Name

PHF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000008751.3	ENSCPOT00000008829.2	ENSCPOP00000007856.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.90e-10	39.7	88	139

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedek.slveCekCrewfHpaClklsveeelpnsek.wiCpkCr 52
            C vC+++       lv CekCr+++H++C+ + +  + +++ + w C++C 
   Q: 88   LCCVCRSENVVAGnRLVSCEKCRHAYHQDCHVPRAPAPGEGEATaWVCRQCV 139
           588***998876459*******************66666666669******7 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MAQPPRLSRS GAPSLWDPTS APTSGPRPRL WEGQDVLARW TDGLLYLGTI KKVDSAREVC 60
LVQFEDDSQF LVLWKDISPA ALPGEELLCC VCRSENVVAG NRLVSCEKCR HAYHQDCHVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCACAGC CCCCCCGGCT GAGCCGCTCT GGGGCCCCCT CTCTCTGGGA CCCCACTTCT 60
GCTCCCACCT CAGGCCCCAG GCCTCGACTT TGGGAGGGGC AGGATGTCCT GGCCAGATGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR025894--Mtf2_C_dom
IPR031202--PHF1
IPR002999--Tudor
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF14061--Mtf2_C
PF00628--PHD

SMART

SM00249--PHD
SM00333--TUDOR

Gene Ontology

GO:0035098--C:ESC/E(Z) complex
GO:0035861--C:site of double-strand break
GO:0008270--F:zinc ion binding
GO:0006974--P:cellular response to DNA damage stimulus
GO:0061086--P:negative regulation of histone H3-K27 methylation
GO:0061087--P:positive regulation of histone H3-K27 methylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001720	Ailuropoda melanoleuca	95.08	0.00e+00	901.00
IUUC-Apl-004128	Anas platyrhynchos	57.88	1.00e-110	393.00
IUUC-Aca-004646	Anolis carolinensis	57.88	1.00e-110	393.00
IUUC-Ame-011369	Astyanax mexicanus	47.97	6.00e-128	450.00
IUUC-Bta-012536	Bos taurus	94.38	0.00e+00	864.00
IUUC-Cja-019049	Callithrix jacchus	94.38	0.00e+00	882.00
IUUC-Cfa-021211	Canis familiaris	94.38	0.00e+00	897.00
IUUC-Csa-023154	Chlorocebus sabaeus	94.02	0.00e+00	905.00
IUUC-Csv-026067	Ciona savignyi	45.70	3.00e-75	274.00
IUUC-Dre-028597	Danio rerio	47.99	2.00e-131	462.00
IUUC-Dno-029487	Dasypus novemcinctus	56.91	4.00e-108	385.00
IUUC-Dor-030431	Dipodomys ordii	93.51	0.00e+00	854.00
IUUC-Dme-031808	Drosophila melanogaster	31.38	1.00e-42	168.00
IUUC-Ete-032589	Echinops telfairi	86.78	0.00e+00	880.00
IUUC-Eca-034315	Equus caballus	95.08	0.00e+00	929.00
IUUC-Fca-036088	Felis catus	57.56	6.00e-110	391.00
IUUC-Fal-036851	Ficedula albicollis	58.80	9.00e-90	323.00
IUUC-Gmo-039382	Gadus morhua	65.27	8.00e-119	419.00
IUUC-Gga-041162	Gallus gallus	57.88	1.00e-110	393.00
IUUC-Gac-041748	Gasterosteus aculeatus	65.81	1.00e-120	425.00
IUUC-Ggo-044966	Gorilla gorilla	94.73	0.00e+00	900.00
IUUC-Hsa-046188	Homo sapiens	94.73	0.00e+00	869.00
IUUC-Itr-048249	Ictidomys tridecemlineatus	94.73	0.00e+00	903.00
IUUC-Lch-050336	Latimeria chalumnae	53.27	6.00e-148	517.00
IUUC-Loc-051747	Lepisosteus oculatus	60.00	4.00e-111	395.00
IUUC-Laf-053729	Loxodonta africana	90.24	0.00e+00	841.00
IUUC-Mcc-055486	Macaca mulatta	94.02	0.00e+00	905.00
IUUC-Meu-055933	Macropus eugenii	91.01	0.00e+00	665.00
IUUC-Mla-058811	Melampsora laricipopulina	31.25	5.70e-01	29.30
IUUC-Mga-059203	Meleagris gallopavo	57.88	1.00e-110	393.00
IUUC-Mmr-061114	Microcebus murinus	93.51	0.00e+00	910.00
IUUC-Mdo-062033	Monodelphis domestica	88.83	0.00e+00	650.00
IUUC-Mmu-063482	Mus musculus	90.16	0.00e+00	912.00
IUUC-Mpu-065725	Mustela putorius furo	94.55	0.00e+00	911.00
IUUC-Mlu-067243	Myotis lucifugus	91.92	0.00e+00	894.00
IUUC-Nle-069759	Nomascus leucogenys	94.38	0.00e+00	881.00
IUUC-Ont-071655	Oreochromis niloticus	52.86	3.00e-124	438.00
IUUC-Oan-073043	Ornithorhynchus anatinus	55.70	1.00e-69	256.00
IUUC-Ocu-073930	Oryctolagus cuniculus	94.90	0.00e+00	886.00
IUUC-Ola-087332	Oryzias latipes	46.63	8.00e-88	317.00
IUUC-Oga-088161	Otolemur garnettii	92.79	0.00e+00	893.00
IUUC-Oar-089582	Ovis aries	94.04	0.00e+00	858.00
IUUC-Ptr-090810	Pan troglodytes	94.38	0.00e+00	919.00
IUUC-Pan-091980	Papio anubis	94.02	0.00e+00	905.00
IUUC-Psi-092976	Pelodiscus sinensis	51.41	7.00e-112	397.00
IUUC-Pma-094138	Petromyzon marinus	53.11	9.00e-101	359.00
IUUC-Pfo-097260	Poecilia formosa	60.17	7.00e-122	429.00
IUUC-Pab-098556	Pongo abelii	94.38	0.00e+00	881.00
IUUC-Pca-100360	Procavia capensis	93.76	0.00e+00	807.00
IUUC-Pva-102900	Pteropus vampyrus	94.01	0.00e+00	877.00
IUUC-Rno-105536	Rattus norvegicus	91.56	0.00e+00	897.00
IUUC-Sha-107357	Sarcophilus harrisii	83.39	0.00e+00	820.00
IUUC-Ssc-116070	Sus scrofa	93.85	0.00e+00	853.00
IUUC-Tgu-117230	Taeniopygia guttata	57.51	3.00e-108	385.00
IUUC-Tru-118228	Takifugu rubripes	50.63	2.00e-91	329.00
IUUC-Tsy-119247	Tarsius syrichta	96.83	3.00e-179	621.00
IUUC-Tni-120027	Tetraodon nigroviridis	55.63	2.00e-101	363.00
IUUC-Tbe-127780	Tupaia belangeri	88.40	0.00e+00	818.00
IUUC-Ttr-128691	Tursiops truncatus	56.91	5.00e-108	384.00
IUUC-Vpa-130085	Vicugna pacos	51.70	3.00e-44	172.00
IUUC-Xtr-132767	Xenopus tropicalis	57.79	3.00e-110	392.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence