iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Cel-018703

Ensembl Protein ID

C05C10.6b

UniProt Accession

G5EES6; G5EES6_CAEEL

Genbank Protein ID

CAC42247.1

Protein Name

Ubiquitin Fusion Degradation (Yeast UFD homolog)

Genbank Nucleotide ID

BX284602

Gene Name

ufd-3; C05C10.6; CELE_C05C10.6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
WBGene00007333	C05C10.6a	C05C10.6a
WBGene00007333	C05C10.6b	C05C10.6b

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-19	69.1	116	147

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd..tllvsGsdDgtikvWDlr 31
           H+  v+cl+ ++  t+++sGs+D ++ +W ++
   Q: 116  HKQNVCCLHINEkaTHMLSGSWDSNVIIWPIT 147
           9999******55689**************865 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MADDGLGDVP METESMPQYT ISHVIEAHKS DTKALAVTQG GCLISGGRDE TVKFWAKKGK 60
QYTKTHAFEQ PKGITVNSIA YAELADGWRL FVGRRDGTIA VFGPSQAEPY AIFNEHKQNV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGATG ACGGTCTCGG TGACGTGCCA ATGGAAACGG AAAGTGTGAG TTTTAGAATT 60
TGCCGAATTG AAGTGGAATT TATTTTGCAG ATGCCACAGT ACACAATTTC CCATGTTATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033510--PLAA/Doa1/Lub1
IPR015155--PLAA_fam_Ub-bd_PFU
IPR013535--PUL_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS51394--PFU
PS51396--PUL
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF09070--PFU
PF08324--PUL
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0043130--F:ubiquitin binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0010992--P:ubiquitin homeostasis

KEGG

cel:CELE_C05C10.6

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000146	Aegilops tauschii	21.73	2.00e-28	119.00
IUUC-Aml-002125	Ailuropoda melanoleuca	27.46	7.00e-72	264.00
IUUC-Atr-002554	Amborella trichopoda	25.19	2.00e-29	123.00
IUUC-Apl-004094	Anas platyrhynchos	29.02	2.00e-65	242.00
IUUC-Aca-004726	Anolis carolinensis	27.54	4.00e-71	261.00
IUUC-Aly-005961	Arabidopsis lyrata	24.33	2.00e-33	136.00
IUUC-Ath-006639	Arabidopsis thaliana	24.43	7.00e-32	131.00
IUUC-Ago-007772	Ashbya gossypii	28.24	5.00e-34	138.00
IUUC-Acl-008316	Aspergillus clavatus	27.05	4.00e-33	135.00
IUUC-Afl-008532	Aspergillus flavus	25.41	6.00e-34	138.00
IUUC-Afu-008950	Aspergillus fumigatus	25.63	1.00e-35	143.00
IUUC-Ani-009186	Aspergillus nidulans	24.67	5.00e-34	138.00
IUUC-Ang-009575	Aspergillus niger	26.39	1.00e-32	134.00
IUUC-Aor-010086	Aspergillus oryzae	25.41	6.00e-34	138.00
IUUC-Ate-010541	Aspergillus terreus	24.70	3.00e-30	125.00
IUUC-Ame-011633	Astyanax mexicanus	28.60	2.00e-74	272.00
IUUC-Bgr-012292	Blumeria graminis	24.75	7.00e-38	150.00
IUUC-Bta-013218	Bos taurus	27.99	4.00e-74	271.00
IUUC-Bci-013876	Botrytis cinerea	26.12	8.00e-43	167.00
IUUC-Bdi-014810	Brachypodium distachyon	23.03	6.00e-37	147.00
IUUC-Bol-015304	Brassica oleracea	26.40	3.00e-33	135.00
IUUC-Bra-017593	Brassica rapa	25.29	1.00e-34	140.00
IUUC-Cja-019270	Callithrix jacchus	27.68	5.00e-73	267.00
IUUC-Cfa-021262	Canis familiaris	27.57	2.00e-72	265.00
IUUC-Cpo-021449	Cavia porcellus	27.12	6.00e-60	224.00
IUUC-Csa-024140	Chlorocebus sabaeus	27.63	4.00e-73	268.00
IUUC-Cho-024923	Choloepus hoffmanni	26.42	4.00e-33	135.00
IUUC-Cin-025373	Ciona intestinalis	28.80	2.00e-46	179.00
IUUC-Csv-026324	Ciona savignyi	27.92	1.00e-69	256.00
IUUC-Cgl-026711	Colletotrichum gloeosporioides	23.13	2.00e-21	96.30
IUUC-Cne-026998	Cryptococcus neoformans	26.39	3.00e-33	135.00
IUUC-Dre-028674	Danio rerio	28.62	6.00e-72	264.00
IUUC-Dno-028966	Dasypus novemcinctus	26.93	4.00e-71	261.00
IUUC-Dor-030343	Dipodomys ordii	25.43	2.00e-29	123.00
IUUC-Dse-031385	Dothistroma septosporum	24.42	1.00e-33	137.00
IUUC-Dme-032044	Drosophila melanogaster	26.68	8.00e-59	220.00
IUUC-Ete-032506	Echinops telfairi	25.05	6.00e-26	111.00
IUUC-Eca-033547	Equus caballus	27.76	9.00e-75	273.00
IUUC-Eeu-034462	Erinaceus europaeus	28.86	2.00e-22	100.00
IUUC-Fca-035893	Felis catus	28.02	8.00e-75	273.00
IUUC-Fal-037235	Ficedula albicollis	29.12	4.00e-72	265.00
IUUC-Fox-037836	Fusarium oxysporum	26.19	5.00e-33	135.00
IUUC-Fso-038251	Fusarium solani	24.18	8.00e-34	137.00
IUUC-Gmo-038648	Gadus morhua	27.57	4.00e-64	238.00
IUUC-Ggr-039867	Gaeumannomyces graminis	26.52	1.00e-27	117.00
IUUC-Gga-040989	Gallus gallus	27.48	6.00e-70	257.00
IUUC-Gac-041344	Gasterosteus aculeatus	28.10	6.00e-59	221.00
IUUC-Gma-042720	Glycine max	24.40	1.00e-31	130.00
IUUC-Ggo-045009	Gorilla gorilla	27.67	1.00e-55	209.00
IUUC-Hsa-046807	Homo sapiens	27.41	7.00e-72	264.00
IUUC-Itr-048636	Ictidomys tridecemlineatus	27.64	8.00e-72	263.00
IUUC-Kpa-049134	Komagataella pastoris	27.37	2.00e-40	159.00
IUUC-Lch-049597	Latimeria chalumnae	29.78	7.00e-43	167.00
IUUC-Lpe-050821	Leersia perrieri	22.42	2.00e-30	126.00
IUUC-Loc-051849	Lepisosteus oculatus	28.02	3.00e-76	278.00
IUUC-Lma-053297	Leptosphaeria maculans	25.30	9.00e-45	174.00
IUUC-Laf-053495	Loxodonta africana	27.41	2.00e-68	252.00
IUUC-Meu-055983	Macropus eugenii	29.91	2.00e-22	100.00
IUUC-Mor-057006	Magnaporthe oryzae	27.31	2.00e-27	116.00
IUUC-Mpo-057465	Magnaporthe poae	26.82	1.00e-26	114.00
IUUC-Mtr-058374	Medicago truncatula	22.34	5.00e-31	128.00
IUUC-Mla-058895	Melampsora laricipopulina	27.10	2.00e-41	162.00
IUUC-Mvi-060297	Microbotryum violaceum	30.63	2.00e-42	166.00
IUUC-Mmr-060810	Microcebus murinus	26.91	2.00e-61	229.00
IUUC-Mdo-062671	Monodelphis domestica	27.44	1.00e-66	246.00
IUUC-Mmu-063536	Mus musculus	28.30	1.00e-72	266.00
IUUC-Mac-064902	Musa acuminata	23.02	4.00e-34	138.00
IUUC-Mpu-066085	Mustela putorius furo	27.68	2.00e-74	272.00
IUUC-Mlu-067907	Myotis lucifugus	28.13	3.00e-48	184.00
IUUC-Nfi-068457	Neosartorya fischeri	28.67	6.00e-28	117.00
IUUC-Ncr-068622	Neurospora crassa	24.93	3.00e-38	152.00
IUUC-Nle-069049	Nomascus leucogenys	27.43	3.00e-71	261.00
IUUC-Opr-071013	Ochotona princeps	29.89	1.00e-14	73.90
IUUC-Ont-071339	Oreochromis niloticus	28.38	7.00e-75	273.00
IUUC-Oan-073353	Ornithorhynchus anatinus	26.62	2.00e-14	71.20
IUUC-Ocu-074625	Oryctolagus cuniculus	28.00	4.00e-74	271.00
IUUC-Oba-075226	Oryza barthii	22.28	3.00e-24	105.00
IUUC-Obr-076875	Oryza brachyantha	23.46	3.00e-36	145.00
IUUC-Ogl-077057	Oryza glaberrima	23.09	2.00e-34	139.00
IUUC-Ogu-078156	Oryza glumaepatula	23.00	1.00e-34	140.00
IUUC-Oin-079373	Oryza indica	23.33	7.00e-34	137.00
IUUC-Olo-080849	Oryza longistaminata	24.54	7.00e-19	87.80
IUUC-Ome-081654	Oryza meridionalis	22.53	4.00e-24	105.00
IUUC-Oni-082221	Oryza nivara	22.25	2.00e-23	102.00
IUUC-Opu-084103	Oryza punctata	24.18	5.00e-23	101.00
IUUC-Oru-084751	Oryza rufipogon	22.92	2.00e-24	105.00
IUUC-Osa-085584	Oryza sativa	23.58	6.00e-34	138.00
IUUC-Ola-086974	Oryzias latipes	28.71	2.00e-71	262.00
IUUC-Oga-088052	Otolemur garnettii	26.45	1.00e-71	263.00
IUUC-Oar-089509	Ovis aries	27.82	1.00e-69	256.00
IUUC-Ptr-090911	Pan troglodytes	27.41	1.00e-71	263.00
IUUC-Pan-092141	Papio anubis	27.53	9.00e-71	260.00
IUUC-Psi-093543	Pelodiscus sinensis	29.58	2.00e-73	268.00
IUUC-Pno-094952	Phaeosphaeria nodorum	24.65	1.00e-42	167.00
IUUC-Ppa-095881	Physcomitrella patens	24.52	1.00e-42	166.00
IUUC-Pfo-096739	Poecilia formosa	29.49	1.00e-75	276.00
IUUC-Pab-098641	Pongo abelii	27.24	4.00e-71	261.00
IUUC-Pop-099621	Populus trichocarpa	26.43	3.00e-37	149.00
IUUC-Pca-100599	Procavia capensis	25.63	9.00e-50	190.00
IUUC-Ppe-101874	Prunus persica	23.93	8.00e-37	147.00
IUUC-Pva-103009	Pteropus vampyrus	27.99	9.00e-61	227.00
IUUC-Pgr-103260	Puccinia graminis	26.24	2.00e-47	182.00
IUUC-Ptt-103711	Puccinia triticina	24.96	2.00e-42	166.00
IUUC-Pte-104337	Pyrenophora teres	25.45	4.00e-36	145.00
IUUC-Pyt-104475	Pyrenophora triticirepentis	25.06	3.00e-35	142.00
IUUC-Rno-105273	Rattus norvegicus	28.18	4.00e-75	274.00
IUUC-Sce-106351	Saccharomyces cerevisiae	28.38	1.00e-38	153.00
IUUC-Sha-106758	Sarcophilus harrisii	27.03	6.00e-66	244.00
IUUC-Sja-107687	Schizosaccharomyces japonicus	26.64	1.00e-37	150.00
IUUC-Spo-108093	Schizosaccharomyces pombe	27.62	5.00e-39	154.00
IUUC-Ssl-108623	Sclerotinia sclerotiorum	27.86	1.00e-39	156.00
IUUC-Smo-109368	Selaginella moellendorffii	21.94	4.00e-33	135.00
IUUC-Sit-109699	Setaria italica	22.52	2.00e-34	139.00
IUUC-Sly-111063	Solanum lycopersicum	21.68	4.00e-31	128.00
IUUC-Sar-113199	Sorex araneus	30.03	1.00e-34	140.00
IUUC-Sbi-114745	Sorghum bicolor	23.13	6.00e-33	134.00
IUUC-Sre-115080	Sporisorium reilianum	28.79	3.00e-44	172.00
IUUC-Ssc-115666	Sus scrofa	27.43	5.00e-71	261.00
IUUC-Tgu-116877	Taeniopygia guttata	29.00	1.00e-72	266.00
IUUC-Tru-117580	Takifugu rubripes	27.78	4.00e-73	268.00
IUUC-Tsy-118946	Tarsius syrichta	29.08	2.00e-68	252.00
IUUC-Tni-119755	Tetraodon nigroviridis	25.93	2.00e-53	202.00
IUUC-Tca-120977	Theobroma cacao	23.03	1.00e-34	140.00
IUUC-Tre-122217	Trichoderma reesei	25.74	5.00e-35	141.00
IUUC-Tvi-122671	Trichoderma virens	25.52	2.00e-35	142.00
IUUC-Tae-125234	Triticum aestivum	23.08	4.00e-37	148.00
IUUC-Tme-126971	Tuber melanosporum	23.06	1.00e-34	140.00
IUUC-Tbe-127858	Tupaia belangeri	25.20	1.00e-18	87.40
IUUC-Ttr-128173	Tursiops truncatus	26.23	2.00e-61	229.00
IUUC-Uma-129322	Ustilago maydis	28.91	8.00e-46	177.00
IUUC-Vda-129682	Verticillium dahliae	24.77	3.00e-38	152.00
IUUC-Vpa-130607	Vicugna pacos	26.60	1.00e-55	210.00
IUUC-Vvi-131153	Vitis vinifera	22.38	1.00e-33	136.00
IUUC-Xtr-132208	Xenopus tropicalis	28.06	1.00e-72	266.00
IUUC-Xma-133098	Xiphophorus maculatus	28.83	2.00e-72	265.00
IUUC-Yli-134646	Yarrowia lipolytica	28.63	3.00e-45	175.00
IUUC-Zma-135920	Zea mays	22.03	9.00e-27	114.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence