iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115786

Ensembl Protein ID

ENSSSCP00000010644.2

UniProt Accession

F1RFI9; F1RFI9_PIG

Genbank Protein ID

ENSSSCP00000010644

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CT737304

Gene Name

RHBDD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000009973.2	ENSSSCT00000010929.2	ENSSSCP00000010644.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	84.32	8.00e-98	355.00	IUUC-Hsa-046646
UBD/Alpha-Helix/UBA	76.04	3.00e-86	315.00	IUUC-Mmu-063304

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

MHARGPPGLP SPALPLASSI LMLLISSLWL LGAGPSLVLA PELLLDPWQA HRLLTHALGH 60
TALPSLLLSL LLLTTLGWRQ ECHLGTLRFL HASTLLALAC GLMAVLLAGL GLSRAAGGCG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACACAGCCC CAAGACCACC TTTGACCACC TTCAGCCAAG TTATGCATGC CAGAGGCCCA 60
CCTGGCCTAC CATCTCCGGC GCTGCCTCTC GCTTCCTCCA TCCTGATGCT TCTAATAAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR022764--Peptidase_S54_rhomboid_dom
IPR015940--UBA
IPR009060--UBA-like

Pfam

PF01694--Rhomboid
PF00627--UBA

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005622--C:intracellular
GO:0004252--F:serine-type endopeptidase activity
GO:0001889--P:liver development
GO:0000165--P:MAPK cascade
GO:0032815--P:negative regulation of natural killer cell activation
GO:0045732--P:positive regulation of protein catabolic process
GO:0002673--P:regulation of acute inflammatory response
GO:0050708--P:regulation of protein secretion
GO:0009410--P:response to xenobiotic stimulus

KEGG

ssc:100158098

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001619	Ailuropoda melanoleuca	89.94	3.00e-97	348.00
IUUC-Aca-004494	Anolis carolinensis	40.27	2.00e-28	119.00
IUUC-Ame-010805	Astyanax mexicanus	55.68	6.00e-20	91.30
IUUC-Bta-012844	Bos taurus	87.98	1.00e-80	292.00
IUUC-Cja-019853	Callithrix jacchus	83.38	1.00e-92	333.00
IUUC-Cfa-021026	Canis familiaris	88.17	2.00e-104	372.00
IUUC-Csa-023360	Chlorocebus sabaeus	83.94	1.00e-107	382.00
IUUC-Dre-027575	Danio rerio	31.40	1.00e-03	37.40
IUUC-Dno-029113	Dasypus novemcinctus	80.11	1.00e-77	283.00
IUUC-Dor-030646	Dipodomys ordii	79.37	4.00e-97	347.00
IUUC-Eca-034158	Equus caballus	87.57	9.00e-114	402.00
IUUC-Eeu-034983	Erinaceus europaeus	70.14	4.00e-64	236.00
IUUC-Fca-035531	Felis catus	86.84	5.00e-108	384.00
IUUC-Ggo-045015	Gorilla gorilla	83.42	9.00e-101	360.00
IUUC-Hsa-046646	Homo sapiens	83.94	1.00e-105	375.00
IUUC-Itr-048164	Ictidomys tridecemlineatus	76.42	2.00e-91	328.00
IUUC-Lch-049560	Latimeria chalumnae	36.34	1.00e-26	114.00
IUUC-Loc-052194	Lepisosteus oculatus	39.67	7.00e-05	41.20
IUUC-Laf-054308	Loxodonta africana	81.61	4.00e-99	354.00
IUUC-Mcc-055034	Macaca mulatta	72.40	3.00e-79	288.00
IUUC-Meu-056317	Macropus eugenii	54.36	1.00e-38	153.00
IUUC-Mor-057124	Magnaporthe oryzae	45.71	1.60e-01	32.30
IUUC-Mmr-061591	Microcebus murinus	80.12	2.00e-73	268.00
IUUC-Mdo-062745	Monodelphis domestica	54.57	4.00e-47	181.00
IUUC-Mmu-063304	Mus musculus	75.50	4.00e-89	321.00
IUUC-Mpu-066394	Mustela putorius furo	87.61	2.00e-101	362.00
IUUC-Mlu-067595	Myotis lucifugus	85.03	3.00e-104	371.00
IUUC-Nle-069211	Nomascus leucogenys	82.46	1.00e-98	353.00
IUUC-Opr-070249	Ochotona princeps	64.73	9.00e-60	222.00
IUUC-Oan-073402	Ornithorhynchus anatinus	60.40	8.00e-08	49.70
IUUC-Ocu-074418	Oryctolagus cuniculus	76.17	1.00e-88	319.00
IUUC-Ola-087450	Oryzias latipes	53.66	2.00e-19	88.60
IUUC-Oga-088214	Otolemur garnettii	82.39	1.00e-115	409.00
IUUC-Oar-089324	Ovis aries	66.08	4.00e-49	187.00
IUUC-Ptr-091322	Pan troglodytes	81.53	9.00e-77	279.00
IUUC-Pan-092490	Papio anubis	83.16	3.00e-109	388.00
IUUC-Pfo-097125	Poecilia formosa	55.81	6.00e-20	91.30
IUUC-Pab-097546	Pongo abelii	85.02	5.00e-35	140.00
IUUC-Pva-102615	Pteropus vampyrus	84.95	9.00e-113	399.00
IUUC-Rno-105844	Rattus norvegicus	76.64	1.00e-91	329.00
IUUC-Sha-107118	Sarcophilus harrisii	55.60	5.00e-30	124.00
IUUC-Ttr-128407	Tursiops truncatus	83.87	3.00e-105	375.00
IUUC-Xtr-131878	Xenopus tropicalis	58.54	4.00e-17	82.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence