iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-013493

Ensembl Protein ID

ENSBTAP00000023697.4

UniProt Accession

E1BKF9; E1BKF9_BOVIN

Genbank Protein ID

ENSBTAP00000023697

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02048838

Gene Name

CFAP52

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000017823.4	ENSBTAT00000023697.4	ENSBTAP00000023697.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.50e-32	108.4	463	494
UBD/Beta-Prp	2.20e-57	194.6	165	493

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlr 31
           H++sv+c++   s+   v++s Dgt+ +WDl 
   Q: 463  HKSSVSCIRVkkSNEECVTASTDGTCIIWDLV 494
           9**********87799**************85 PP

UBD/Beta-Prp

   S: 14   tcvkfspdksllatgsrdgtikvwdvttgkl.................lrslsgheae............................... 54
           t v fs+ ++ ++++  +gti+vw+++ ++                                                           
   Q: 165  TTVIFSKCRDEMFVTAGNGTIRVWELDLPNRkiwptecqtgqmkrivmS--------Ismanddsffylgtttgdilkmnprtklladt 245
           55667555554555555**********9998777777777777666541........03333345678888888999999999999999 PP
   S: 55   ..........vtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetl 133
                     v+a+++ + g  l+ gs D+++      ++k++ +++  +  ++s+++  +g+ + +G++ + i   +  + ++   + 
   Q: 246  gpakdkfslgVSAICCLKMG-GLLVGSGDGLLVFCKSPSYKPIKKIQ-LQGGITSITLRGEGHQFFVGTEESHIYRVNFTNFKETL-IT 331
           99**************9999.69999999999666999*********.************************99999999999999.** PP
   S: 134  sghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlng. 220
           + h ++v  +v++  +  l+++++  + +r+W   t++ l + t   +   + ++f ++gk+++s+ +dg+++ +  +tg+ ++  n+ 
   Q: 332  TCHFESVEDIVFPFGTaELFATCA-KKDIRVWHTLTNRELLRITV-PNMTCHGIDFMRDGKSIISAWDDGRIRAFAPETGRLMYVINNa 418
           ************987757777776.589******99999999987.99*********************************98877655 PP
   S: 221  htdnvksvrfspnderlvsgssDgsiriW..dlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwkl 294
           h+  v+ ++++++ +r++sg+ +g +r+W    ++++l  +l+ h+ssv+++ v + ++ ++v++s d++  iw+l
   Q: 419  HRIGVTAIATTSDCKRVISGGGEGEVRVWhiGHQTQKLEEALKEHKSSVSCIRV-KKSNEECVTASTDGTCIIWDL 493
           *****************************9999*********************.999****************98 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

METQASPKDE VAEAVELELE AVIGFNGHVP TGLKCHPDQE HLVYPLGCTI LIQAINTQEQ 60
NFLHGHGNNV SCVAISKSGL YIASGQVTFM GFKADIILWD YKKRELMARL SLHKGKIEAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGAGAGGAA AGTGAGCGGA GTCTCCAGAT GATGGAGACC CAAGCTTCGC CCAAGGATGA 60
GGTGGCTGAG GCAGTGGAGC TGGAGCTTGA GGCCGTGATC GGATTCAATG GTGAGACCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR033015--CFAP52
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002048	Ailuropoda melanoleuca	94.34	0.00e+00	1187.00
IUUC-Apl-004011	Anas platyrhynchos	70.32	0.00e+00	912.00
IUUC-Aca-004805	Anolis carolinensis	71.80	0.00e+00	954.00
IUUC-Ame-010655	Astyanax mexicanus	61.87	0.00e+00	793.00
IUUC-Cja-019923	Callithrix jacchus	90.85	0.00e+00	1159.00
IUUC-Cfa-020609	Canis familiaris	93.58	0.00e+00	1177.00
IUUC-Cpo-022158	Cavia porcellus	89.68	0.00e+00	1122.00
IUUC-Cre-022705	Chlamydomonas reinhardtii	45.93	8.00e-166	577.00
IUUC-Csa-023338	Chlorocebus sabaeus	91.81	0.00e+00	1173.00
IUUC-Cho-024884	Choloepus hoffmanni	85.29	0.00e+00	718.00
IUUC-Cin-025634	Ciona intestinalis	62.56	0.00e+00	808.00
IUUC-Csv-026211	Ciona savignyi	63.27	2.00e-95	342.00
IUUC-Dre-028268	Danio rerio	63.56	0.00e+00	874.00
IUUC-Dno-029202	Dasypus novemcinctus	86.19	0.00e+00	1055.00
IUUC-Dor-030197	Dipodomys ordii	78.80	0.00e+00	747.00
IUUC-Dme-032037	Drosophila melanogaster	36.11	2.00e-112	400.00
IUUC-Ete-033049	Echinops telfairi	81.71	0.00e+00	983.00
IUUC-Eca-033884	Equus caballus	92.46	0.00e+00	1158.00
IUUC-Eeu-034477	Erinaceus europaeus	80.65	4.00e-180	624.00
IUUC-Fca-035453	Felis catus	91.85	0.00e+00	1160.00
IUUC-Gmo-039448	Gadus morhua	64.03	5.00e-111	395.00
IUUC-Gga-040295	Gallus gallus	70.29	0.00e+00	948.00
IUUC-Gac-042074	Gasterosteus aculeatus	56.28	0.00e+00	704.00
IUUC-Ggo-044438	Gorilla gorilla	92.15	0.00e+00	905.00
IUUC-Hsa-046794	Homo sapiens	90.85	0.00e+00	1160.00
IUUC-Itr-048315	Ictidomys tridecemlineatus	92.51	0.00e+00	679.00
IUUC-Lch-050554	Latimeria chalumnae	65.40	0.00e+00	812.00
IUUC-Loc-052080	Lepisosteus oculatus	66.72	0.00e+00	904.00
IUUC-Laf-054288	Loxodonta africana	91.49	0.00e+00	1150.00
IUUC-Mcc-055746	Macaca mulatta	84.91	0.00e+00	1055.00
IUUC-Meu-056507	Macropus eugenii	73.43	5.00e-147	514.00
IUUC-Mga-059858	Meleagris gallopavo	70.90	0.00e+00	902.00
IUUC-Mmr-061757	Microcebus murinus	93.84	0.00e+00	1023.00
IUUC-Mdo-062670	Monodelphis domestica	81.83	0.00e+00	1075.00
IUUC-Mmu-064084	Mus musculus	90.21	0.00e+00	1159.00
IUUC-Mpu-066253	Mustela putorius furo	94.68	0.00e+00	1160.00
IUUC-Mlu-067944	Myotis lucifugus	74.48	0.00e+00	905.00
IUUC-Nle-069098	Nomascus leucogenys	91.17	0.00e+00	1162.00
IUUC-Opr-070525	Ochotona princeps	82.90	0.00e+00	903.00
IUUC-Ont-071609	Oreochromis niloticus	59.28	0.00e+00	778.00
IUUC-Oan-073543	Ornithorhynchus anatinus	77.81	0.00e+00	1013.00
IUUC-Ocu-074209	Oryctolagus cuniculus	91.17	0.00e+00	1171.00
IUUC-Ola-086464	Oryzias latipes	56.65	0.00e+00	729.00
IUUC-Olu-087600	Ostreococcus lucimarinus	33.85	5.00e-95	342.00
IUUC-Oga-088977	Otolemur garnettii	89.41	0.00e+00	1142.00
IUUC-Oar-089192	Ovis aries	98.56	0.00e+00	1222.00
IUUC-Ptr-090882	Pan troglodytes	87.27	0.00e+00	1085.00
IUUC-Pan-092865	Papio anubis	87.38	0.00e+00	1107.00
IUUC-Psi-093270	Pelodiscus sinensis	76.08	0.00e+00	859.00
IUUC-Pma-094291	Petromyzon marinus	62.72	0.00e+00	855.00
IUUC-Ppa-095984	Physcomitrella patens	42.97	7.00e-148	517.00
IUUC-Pfo-097344	Poecilia formosa	51.14	0.00e+00	688.00
IUUC-Pab-098278	Pongo abelii	90.85	0.00e+00	1158.00
IUUC-Pca-101037	Procavia capensis	93.12	0.00e+00	1150.00
IUUC-Pva-102351	Pteropus vampyrus	91.91	0.00e+00	966.00
IUUC-Rno-105262	Rattus norvegicus	90.53	0.00e+00	1159.00
IUUC-Smo-109009	Selaginella moellendorffii	44.99	7.00e-166	577.00
IUUC-Sar-113156	Sorex araneus	78.86	8.00e-139	487.00
IUUC-Ssc-116319	Sus scrofa	95.12	3.00e-68	249.00
IUUC-Tru-117963	Takifugu rubripes	54.84	0.00e+00	713.00
IUUC-Tsy-119115	Tarsius syrichta	71.81	0.00e+00	810.00
IUUC-Tni-120388	Tetraodon nigroviridis	53.78	0.00e+00	681.00
IUUC-Tbe-127930	Tupaia belangeri	82.88	0.00e+00	632.00
IUUC-Ttr-128981	Tursiops truncatus	94.13	0.00e+00	1132.00
IUUC-Vpa-130492	Vicugna pacos	86.58	0.00e+00	1072.00
IUUC-Xtr-132142	Xenopus tropicalis	68.95	0.00e+00	930.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence