iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Hvu-047587

Ensembl Protein ID

MLOC_52886.1

UniProt Accession

M0WMA2; M0WMA2_HORVV

Protein Name

Protein HIRA

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MLOC_52886	MLOC_52886.1	MLOC_52886.1
MLOC_52886	MLOC_52886.2	MLOC_52886.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-15	57.9	82	119

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gHt++v +l++ +d  +l+sGs D+t+++W+++ g ++
   Q: 82   GHTADVVDLNWsPDdSTLASGSLDNTVHIWSMTNGICT 119
           8***********77799****************99886 PP

Organism

Hordeum vulgare

Functional Description
(View)

Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.

Protein Sequence
(Fasta)

MKSVSKDNQN DDSNQRLLAT MRDHFGSVNC VRWAKHGRYL ASGSDDQAIL IHERKAGSGT 60
SEFGSGEPAD IENWKVVMTL RGHTADVVDL NWSPDDSTLA SGSLDNTVHI WSMTNGICTA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCATCGAC ATCCAGCCCA GCGGCCTCCG CTTCGCCACG GGGGGTGGCG ACCAGAAGGT 60
TGATTTTTTT CCCCTCTTGC TAATTTCTCC AGCGTGATTT GAGCTCTGAA GATTGTGAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR031120--HIR1
IPR011494--Hira
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07569--Hira
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016569--P:covalent chromatin modification
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001039	Aegilops tauschii	97.91	0.00e+00	1875.00
IUUC-Aml-001723	Ailuropoda melanoleuca	41.67	5.00e-75	275.00
IUUC-Atr-003132	Amborella trichopoda	67.82	0.00e+00	1299.00
IUUC-Apl-003197	Anas platyrhynchos	36.68	6.00e-75	274.00
IUUC-Aca-004733	Anolis carolinensis	35.67	2.00e-75	276.00
IUUC-Aly-005446	Arabidopsis lyrata	64.80	0.00e+00	1194.00
IUUC-Ath-007627	Arabidopsis thaliana	63.72	0.00e+00	1159.00
IUUC-Ago-007766	Ashbya gossypii	32.32	1.00e-52	200.00
IUUC-Acl-008104	Aspergillus clavatus	31.67	6.00e-63	234.00
IUUC-Afl-008591	Aspergillus flavus	31.01	2.00e-57	216.00
IUUC-Afu-008781	Aspergillus fumigatus	32.28	3.00e-61	229.00
IUUC-Ani-009272	Aspergillus nidulans	29.71	8.00e-48	184.00
IUUC-Ang-009655	Aspergillus niger	34.38	3.00e-59	222.00
IUUC-Aor-010119	Aspergillus oryzae	33.60	4.00e-57	215.00
IUUC-Ate-010530	Aspergillus terreus	29.50	3.00e-48	185.00
IUUC-Bgr-012237	Blumeria graminis	34.10	1.00e-55	210.00
IUUC-Bta-013320	Bos taurus	37.08	3.00e-76	279.00
IUUC-Bci-013795	Botrytis cinerea	30.27	2.00e-60	226.00
IUUC-Bdi-014075	Brachypodium distachyon	90.81	0.00e+00	1731.00
IUUC-Bol-016440	Brassica oleracea	64.85	0.00e+00	1177.00
IUUC-Bra-016651	Brassica rapa	64.08	0.00e+00	1138.00
IUUC-Cel-018692	Caenorhabditis elegans	27.01	1.00e-38	154.00
IUUC-Cja-018987	Callithrix jacchus	36.76	6.00e-76	277.00
IUUC-Cfa-020132	Canis familiaris	41.67	3.00e-75	275.00
IUUC-Cpo-021484	Cavia porcellus	41.67	5.00e-75	275.00
IUUC-Cre-022846	Chlamydomonas reinhardtii	37.64	4.00e-63	235.00
IUUC-Csa-023081	Chlorocebus sabaeus	37.34	6.00e-76	278.00
IUUC-Cin-025182	Ciona intestinalis	36.01	3.00e-75	275.00
IUUC-Csv-026154	Ciona savignyi	38.19	2.00e-78	286.00
IUUC-Cgl-026655	Colletotrichum gloeosporioides	33.51	1.00e-54	206.00
IUUC-Cne-026891	Cryptococcus neoformans	42.11	4.00e-69	255.00
IUUC-Cme-027349	Cyanidioschyzon merolae	25.42	9.00e-60	224.00
IUUC-Dre-027655	Danio rerio	34.65	2.00e-71	262.00
IUUC-Dno-029557	Dasypus novemcinctus	37.90	5.00e-71	261.00
IUUC-Dor-030687	Dipodomys ordii	37.64	2.00e-64	239.00
IUUC-Dse-031334	Dothistroma septosporum	32.63	1.00e-59	223.00
IUUC-Dme-031746	Drosophila melanogaster	39.72	3.00e-75	275.00
IUUC-Ete-032384	Echinops telfairi	36.18	5.00e-55	208.00
IUUC-Eca-033430	Equus caballus	36.11	3.00e-75	275.00
IUUC-Fca-036121	Felis catus	41.67	4.00e-75	275.00
IUUC-Fal-036817	Ficedula albicollis	36.68	1.00e-74	273.00
IUUC-Fox-037906	Fusarium oxysporum	35.05	3.00e-59	221.00
IUUC-Fso-038409	Fusarium solani	34.55	2.00e-58	219.00
IUUC-Gmo-039151	Gadus morhua	38.76	2.00e-70	259.00
IUUC-Ggr-040016	Gaeumannomyces graminis	34.74	4.00e-57	215.00
IUUC-Gga-040936	Gallus gallus	36.68	4.00e-76	278.00
IUUC-Gac-041405	Gasterosteus aculeatus	34.86	2.00e-68	253.00
IUUC-Gma-044252	Glycine max	72.30	0.00e+00	1342.00
IUUC-Ggo-045430	Gorilla gorilla	37.34	5.00e-76	278.00
IUUC-Hsa-046442	Homo sapiens	37.34	4.00e-76	278.00
IUUC-Itr-048910	Ictidomys tridecemlineatus	41.79	9.00e-57	212.00
IUUC-Kpa-049145	Komagataella pastoris	32.36	7.00e-51	194.00
IUUC-Lch-050474	Latimeria chalumnae	35.62	1.00e-71	263.00
IUUC-Lpe-051209	Leersia perrieri	85.27	0.00e+00	1607.00
IUUC-Loc-052119	Lepisosteus oculatus	35.08	4.00e-69	254.00
IUUC-Lma-053237	Leptosphaeria maculans	33.24	4.00e-56	212.00
IUUC-Laf-053718	Loxodonta africana	37.77	3.00e-76	279.00
IUUC-Mcc-055621	Macaca mulatta	37.69	2.00e-76	279.00
IUUC-Meu-055914	Macropus eugenii	39.64	1.00e-53	203.00
IUUC-Mor-057090	Magnaporthe oryzae	35.41	1.00e-57	217.00
IUUC-Mpo-057364	Magnaporthe poae	34.63	5.00e-57	215.00
IUUC-Mtr-057744	Medicago truncatula	68.60	0.00e+00	1324.00
IUUC-Mla-058914	Melampsora laricipopulina	26.03	2.00e-73	269.00
IUUC-Mga-060181	Meleagris gallopavo	36.90	2.00e-76	279.00
IUUC-Mvi-060432	Microbotryum violaceum	33.33	4.00e-51	195.00
IUUC-Mmr-060871	Microcebus murinus	36.54	8.00e-78	284.00
IUUC-Mdo-062301	Monodelphis domestica	35.64	6.00e-74	271.00
IUUC-Mmu-063888	Mus musculus	35.89	2.00e-75	276.00
IUUC-Mac-064768	Musa acuminata	71.93	0.00e+00	1347.00
IUUC-Mpu-066732	Mustela putorius furo	41.67	4.00e-75	275.00
IUUC-Mlu-067542	Myotis lucifugus	36.11	1.00e-75	276.00
IUUC-Nfi-068396	Neosartorya fischeri	32.48	8.00e-61	227.00
IUUC-Ncr-068842	Neurospora crassa	32.23	4.00e-59	222.00
IUUC-Nle-070156	Nomascus leucogenys	37.34	7.00e-76	277.00
IUUC-Opr-070808	Ochotona princeps	41.83	6.00e-54	204.00
IUUC-Ont-072105	Oreochromis niloticus	35.31	1.00e-70	260.00
IUUC-Ocu-074962	Oryctolagus cuniculus	36.32	2.00e-75	276.00
IUUC-Oba-075178	Oryza barthii	88.21	0.00e+00	1590.00
IUUC-Obr-076399	Oryza brachyantha	87.32	0.00e+00	1608.00
IUUC-Ogu-078797	Oryza glumaepatula	88.21	0.00e+00	1590.00
IUUC-Oin-080085	Oryza indica	87.99	0.00e+00	1586.00
IUUC-Olo-081048	Oryza longistaminata	88.86	0.00e+00	734.00
IUUC-Ome-081324	Oryza meridionalis	88.10	0.00e+00	1588.00
IUUC-Oni-082548	Oryza nivara	87.55	0.00e+00	1585.00
IUUC-Opu-084008	Oryza punctata	86.82	0.00e+00	769.00
IUUC-Oru-084339	Oryza rufipogon	88.21	0.00e+00	1590.00
IUUC-Osa-085782	Oryza sativa	88.21	0.00e+00	1590.00
IUUC-Ola-087302	Oryzias latipes	35.33	1.00e-68	253.00
IUUC-Olu-087611	Ostreococcus lucimarinus	33.91	3.00e-139	488.00
IUUC-Oga-087935	Otolemur garnettii	37.34	3.00e-76	279.00
IUUC-Oar-089229	Ovis aries	35.39	7.00e-58	218.00
IUUC-Ptr-090715	Pan troglodytes	37.34	5.00e-76	278.00
IUUC-Pan-092318	Papio anubis	37.34	7.00e-76	277.00
IUUC-Psi-094053	Pelodiscus sinensis	36.17	6.00e-74	271.00
IUUC-Pno-094985	Phaeosphaeria nodorum	33.43	9.00e-51	194.00
IUUC-Ppa-095499	Physcomitrella patens	48.39	0.00e+00	849.00
IUUC-Pfo-096857	Poecilia formosa	38.11	4.00e-66	245.00
IUUC-Pab-098047	Pongo abelii	37.34	5.00e-76	278.00
IUUC-Pop-099587	Populus trichocarpa	68.36	0.00e+00	1291.00
IUUC-Pca-100558	Procavia capensis	48.12	5.00e-41	161.00
IUUC-Ppe-101261	Prunus persica	70.46	0.00e+00	1338.00
IUUC-Pva-102683	Pteropus vampyrus	35.89	1.00e-75	276.00
IUUC-Pgr-103660	Puccinia graminis	39.03	5.00e-55	208.00
IUUC-Ptt-103900	Puccinia triticina	32.17	3.00e-55	208.00
IUUC-Pte-104209	Pyrenophora teres	33.77	1.00e-58	220.00
IUUC-Pyt-104802	Pyrenophora triticirepentis	34.04	1.00e-58	220.00
IUUC-Rno-105137	Rattus norvegicus	36.11	7.00e-76	277.00
IUUC-Sce-106291	Saccharomyces cerevisiae	34.40	6.00e-56	211.00
IUUC-Sha-107514	Sarcophilus harrisii	33.62	3.00e-62	232.00
IUUC-Sja-107833	Schizosaccharomyces japonicus	27.28	8.00e-79	287.00
IUUC-Spo-108162	Schizosaccharomyces pombe	34.20	2.00e-66	246.00
IUUC-Smo-109186	Selaginella moellendorffii	50.37	0.00e+00	847.00
IUUC-Sit-109980	Setaria italica	86.95	0.00e+00	1607.00
IUUC-Sly-111547	Solanum lycopersicum	66.43	0.00e+00	1280.00
IUUC-Stu-112705	Solanum tuberosum	66.73	0.00e+00	1279.00
IUUC-Sar-113222	Sorex araneus	34.98	8.00e-69	254.00
IUUC-Sbi-114528	Sorghum bicolor	84.64	0.00e+00	1566.00
IUUC-Sre-115061	Sporisorium reilianum	37.10	1.00e-61	230.00
IUUC-Ssc-116364	Sus scrofa	35.89	3.00e-75	275.00
IUUC-Tgu-116645	Taeniopygia guttata	36.68	1.00e-74	273.00
IUUC-Tru-117590	Takifugu rubripes	35.45	4.00e-74	271.00
IUUC-Tsy-119212	Tarsius syrichta	41.58	3.00e-63	236.00
IUUC-Tni-119915	Tetraodon nigroviridis	35.15	2.00e-72	266.00
IUUC-Tca-121765	Theobroma cacao	68.47	0.00e+00	1313.00
IUUC-Tre-121887	Trichoderma reesei	33.77	3.00e-51	196.00
IUUC-Tvi-122262	Trichoderma virens	34.12	1.00e-51	196.00
IUUC-Tae-123009	Triticum aestivum	97.88	0.00e+00	1367.00
IUUC-Tur-126483	Triticum urartu	98.43	0.00e+00	1890.00
IUUC-Tme-127202	Tuber melanosporum	28.66	5.00e-42	165.00
IUUC-Tbe-127350	Tupaia belangeri	38.54	7.00e-49	187.00
IUUC-Ttr-129077	Tursiops truncatus	32.91	8.00e-65	241.00
IUUC-Uma-129465	Ustilago maydis	35.71	2.00e-65	242.00
IUUC-Vda-129844	Verticillium dahliae	32.11	3.00e-56	212.00
IUUC-Vvi-131397	Vitis vinifera	70.08	0.00e+00	1350.00
IUUC-Xtr-132057	Xenopus tropicalis	34.62	2.00e-74	273.00
IUUC-Xma-134139	Xiphophorus maculatus	34.14	3.00e-68	251.00
IUUC-Yli-134424	Yarrowia lipolytica	35.85	2.00e-57	216.00
IUUC-Zma-135839	Zea mays	82.92	0.00e+00	1570.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence