iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-096003

Ensembl Protein ID

PP1S27_239V6.1

UniProt Accession

A9RTD8; A9RTD8_PHYPA

Genbank Protein ID

EDQ77787.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544916

Gene Name

PHYPADRAFT_118953

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S27_239V6	PP1S27_239V6.1	PP1S27_239V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-20	72.3	177	215

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt +vt++++ s+  +l+s+s D++++vWD+ +g +l+
   Q: 177  GHTKEVTDIDWsSNnQYLSSSSLDKSVRVWDVQKGMCLR 215
           8***********555********************9986 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MEPVGDTVVK PSHAEAFAAL MEPGNGDPGY ISMRRLLLYR KALSNKLVRQ KWELNGNGYV 60
AFHDYIRQLK RLQNSQNSQP ASPTSTQAAL DSGPWAAYER GSWSSSRGGS MSESGAQEIP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGACCCTTGC TAGAGAGACG ATGTGGCCTC TGGCTATGTC GTCTCCCGAC CTTGAGCCTG 60
CTCTCGCAAT CGTCGAATTT CGTCGTGTTC TCACTCCCTG CTTCACGCGA CCGGGGTAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_118953

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001029	Aegilops tauschii	53.04	1.00e-73	269.00
IUUC-Aml-001761	Ailuropoda melanoleuca	38.02	5.00e-51	194.00
IUUC-Atr-002577	Amborella trichopoda	55.25	2.00e-146	511.00
IUUC-Aca-004423	Anolis carolinensis	37.24	2.00e-50	192.00
IUUC-Aly-005453	Arabidopsis lyrata	54.01	2.00e-141	495.00
IUUC-Ath-007256	Arabidopsis thaliana	53.80	3.00e-141	494.00
IUUC-Ame-010600	Astyanax mexicanus	34.04	5.00e-44	171.00
IUUC-Bta-013511	Bos taurus	38.02	5.00e-51	194.00
IUUC-Bdi-014322	Brachypodium distachyon	52.62	3.00e-122	431.00
IUUC-Bol-015992	Brassica oleracea	52.46	1.00e-140	492.00
IUUC-Bra-017399	Brassica rapa	52.92	5.00e-140	489.00
IUUC-Cja-019508	Callithrix jacchus	37.72	9.00e-51	193.00
IUUC-Cfa-020273	Canis familiaris	38.02	1.00e-51	196.00
IUUC-Cpo-022002	Cavia porcellus	38.32	5.00e-51	194.00
IUUC-Cre-022575	Chlamydomonas reinhardtii	29.88	2.00e-19	89.70
IUUC-Csa-023862	Chlorocebus sabaeus	38.02	4.00e-51	195.00
IUUC-Cin-025687	Ciona intestinalis	36.87	3.00e-57	214.00
IUUC-Csv-025992	Ciona savignyi	37.17	5.00e-58	218.00
IUUC-Dre-028697	Danio rerio	34.04	7.00e-45	174.00
IUUC-Dno-029208	Dasypus novemcinctus	38.02	1.00e-50	193.00
IUUC-Dor-030316	Dipodomys ordii	38.79	1.00e-28	120.00
IUUC-Eca-033362	Equus caballus	33.58	7.00e-31	127.00
IUUC-Eeu-034599	Erinaceus europaeus	33.12	8.00e-35	140.00
IUUC-Fca-035874	Felis catus	38.02	9.00e-51	193.00
IUUC-Gmo-039176	Gadus morhua	35.12	3.00e-45	175.00
IUUC-Gac-041802	Gasterosteus aculeatus	34.53	4.00e-47	181.00
IUUC-Gma-043787	Glycine max	53.86	3.00e-138	484.00
IUUC-Ggo-045546	Gorilla gorilla	38.02	3.00e-51	195.00
IUUC-Hsa-046407	Homo sapiens	38.02	3.00e-51	195.00
IUUC-Hvu-047726	Hordeum vulgare	49.55	7.00e-118	416.00
IUUC-Itr-048939	Ictidomys tridecemlineatus	38.02	5.00e-51	194.00
IUUC-Lpe-051374	Leersia perrieri	51.62	2.00e-123	434.00
IUUC-Loc-052403	Lepisosteus oculatus	32.53	5.00e-44	171.00
IUUC-Laf-053721	Loxodonta africana	38.02	6.00e-51	194.00
IUUC-Mcc-055449	Macaca mulatta	38.02	5.00e-51	194.00
IUUC-Meu-056487	Macropus eugenii	38.62	1.00e-50	192.00
IUUC-Mtr-058659	Medicago truncatula	49.49	2.00e-132	465.00
IUUC-Mmr-061406	Microcebus murinus	38.02	1.00e-50	193.00
IUUC-Mdo-062331	Monodelphis domestica	38.20	7.00e-45	174.00
IUUC-Mmu-064001	Mus musculus	38.32	8.00e-52	197.00
IUUC-Mac-064934	Musa acuminata	53.91	3.00e-139	488.00
IUUC-Mpu-065871	Mustela putorius furo	38.02	6.00e-51	194.00
IUUC-Mlu-067463	Myotis lucifugus	38.02	2.00e-49	189.00
IUUC-Nle-070136	Nomascus leucogenys	38.02	5.00e-51	194.00
IUUC-Opr-070913	Ochotona princeps	38.32	1.00e-47	183.00
IUUC-Ont-071347	Oreochromis niloticus	34.53	2.00e-47	182.00
IUUC-Oan-073527	Ornithorhynchus anatinus	35.09	5.00e-47	181.00
IUUC-Ocu-074829	Oryctolagus cuniculus	36.50	6.00e-45	174.00
IUUC-Oba-075666	Oryza barthii	53.59	2.00e-123	435.00
IUUC-Obr-076413	Oryza brachyantha	53.10	5.00e-121	427.00
IUUC-Ogl-076998	Oryza glaberrima	53.16	1.00e-123	435.00
IUUC-Ogu-078287	Oryza glumaepatula	53.83	4.00e-124	437.00
IUUC-Oin-079359	Oryza indica	53.59	2.00e-123	434.00
IUUC-Olo-080438	Oryza longistaminata	56.15	8.00e-76	276.00
IUUC-Ome-081328	Oryza meridionalis	52.87	2.00e-128	452.00
IUUC-Oni-082574	Oryza nivara	53.59	2.00e-123	435.00
IUUC-Opu-083376	Oryza punctata	49.66	2.00e-113	402.00
IUUC-Oru-085162	Oryza rufipogon	52.15	4.00e-122	431.00
IUUC-Osa-085507	Oryza sativa	52.15	4.00e-122	431.00
IUUC-Ola-087387	Oryzias latipes	34.82	2.00e-44	172.00
IUUC-Oga-088694	Otolemur garnettii	38.02	7.00e-51	194.00
IUUC-Oar-090355	Ovis aries	38.02	6.00e-51	194.00
IUUC-Ptr-091488	Pan troglodytes	34.25	6.00e-26	110.00
IUUC-Pan-092516	Papio anubis	38.02	4.00e-51	195.00
IUUC-Pma-094572	Petromyzon marinus	39.04	5.00e-59	221.00
IUUC-Pfo-096819	Poecilia formosa	34.31	1.00e-44	173.00
IUUC-Pab-098373	Pongo abelii	37.95	2.00e-50	192.00
IUUC-Pop-099930	Populus trichocarpa	54.92	2.00e-143	501.00
IUUC-Pca-100248	Procavia capensis	38.02	1.00e-49	189.00
IUUC-Ppe-101592	Prunus persica	57.17	7.00e-143	499.00
IUUC-Pva-102971	Pteropus vampyrus	38.32	1.00e-50	193.00
IUUC-Rno-105386	Rattus norvegicus	38.55	2.00e-51	195.00
IUUC-Sha-107418	Sarcophilus harrisii	38.62	2.00e-50	192.00
IUUC-Smo-108859	Selaginella moellendorffii	56.82	2.00e-145	508.00
IUUC-Sit-109987	Setaria italica	51.64	3.00e-125	441.00
IUUC-Sly-111433	Solanum lycopersicum	62.23	1.00e-126	444.00
IUUC-Stu-112677	Solanum tuberosum	52.52	2.00e-144	504.00
IUUC-Sar-113317	Sorex araneus	52.63	2.00e-19	89.70
IUUC-Sbi-114115	Sorghum bicolor	51.59	4.00e-65	240.00
IUUC-Tru-118749	Takifugu rubripes	34.33	3.00e-46	178.00
IUUC-Tni-119685	Tetraodon nigroviridis	34.63	1.00e-46	179.00
IUUC-Tca-121769	Theobroma cacao	54.33	5.00e-142	496.00
IUUC-Tae-125563	Triticum aestivum	55.23	4.00e-84	303.00
IUUC-Tur-126403	Triticum urartu	44.44	7.00e-72	263.00
IUUC-Tbe-127245	Tupaia belangeri	38.55	3.00e-36	145.00
IUUC-Ttr-128854	Tursiops truncatus	38.02	2.00e-52	199.00
IUUC-Vvi-131113	Vitis vinifera	54.82	1.00e-139	489.00
IUUC-Xtr-132420	Xenopus tropicalis	37.13	2.00e-51	195.00
IUUC-Xma-134302	Xiphophorus maculatus	34.53	1.00e-47	183.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence