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Tag Content
iUUCD ID IUUC-Bra-017769
Ensembl Protein ID Bra004123.1-P
UniProt Accession M4CIT9; M4CIT9_BRARP
Protein Name Ubiquitin carboxyl-terminal hydrolase
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra004123 Bra004123.1 Bra004123.1-P
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/UCH 3.60e-77 261.0 2 320
Active Site
Position(s) Description Evidence
82 Nucleophile {ECO:0000256|PIRSR:PIRSR038120-1}
157 Proton donor {ECO:0000256|PIRSR:PIRSR038120-1}
Domain Profile

   DUB/UCH

   S: 7    ewleLesdPglftllvedfgvkrdiqveelysLdpenlglyqepvegllllFkinekressrksqvtsndlevvdediiktiffakqvigNsCaty 102
    +w+++esdPg+ft+l+++ vk++ qveelysLd ++l+ + +pv+gl++lFk++ + r + +d ++++ffa+qvi+N+Cat+
   Q: 2 SWCTIESDPGVFTELIQQMQVKGV-QVEELYSLDLDSLNNL-KPVYGLIFLFKWQAGVKDDR---------PT-IQDPVSNLFFANQVINNACATQ 85
    7***********************.****************.**************999998.........22.368999**************** PP
   S: 103 AllsvllncedklldlGttlsrlkestkaespenkalalgnqqvlecihnslariesrseperqdedneqytkeafhfvsyvningrlyeldglkp 198
    A+ls lln ++ d+G++ls lke+tk + ++ k+la++n+++++ +hns+ar+e++ +e++ ++ ++++++hf+syv+++g lyeldglk+
   Q: 86 AILSILLNSPQV--DIGPELSTLKEFTKNFPSDLKGLAINNSEAIRTAHNSFARPEPFVPEEQKTAT---KDDDVYHFISYVPVDGVLYELDGLKE 176
    ********9998..********************************************988777555...59************************ PP
   S: 199 fPldlgkkkete...elkdklkvvraflerikllesdeirfnllaivadrrviktlrlnvlkid................keLlkLlkdieseeek 275
    P+ lg++ ++ e+ + ++ v+ eri+ +++ eirfnlla+ ++r+ i+t+ l+ l+ + eL L ++ s +e
   Q: 177 GPISLGPCPGDQsgiEWLQLVQPVI--QERIERYSQSEIRFNLLAVIKNRKDIYTAELKELQRQkeqmllelagaeksraGELEVLIGEVRSGIEA 270
    ********55542337888888888..******************************987777779*************99*************** PP
   S: 276 ieaqlddekekrkkfkiddirRtenydeficifikdlaregilrklveet 325
    + ++ e+ek k+k ++ rR++ny f++ f+k la++++l+ l e+
   Q: 271 VSDKIVMEEEKFMKWKTENVRRKHNYIPFLFNFLKLLAEKKQLKPLIEKA 320
    *********************************************99984 PP
   

Organism Brassica rapa
Protein Sequence
(Fasta)
MSWCTIESDP GVFTELIQQM QVKGVQVEEL YSLDLDSLNN LKPVYGLIFL FKWQAGVKDD 60
RPTIQDPVSN LFFANQVINN ACATQAILSI LLNSPQVDIG PELSTLKEFT KNFPSDLKGL 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Bra-017769|DUB,UCH|Brassica rapa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTCTTGGT GCACGATCGA GTCGGATCCT GGTACGTATG GTCTCCTCCT CATCTTCTCT 60
TGCGATGGAT AAATAATGGT GTTGGGTTAC AAGATCTCAC TAACTTGAAT TTTAAATCCA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Bra-017769|DUB,UCH|Brassica rapa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway

Interpro

IPR001578--Peptidase_C12_UCH
IPR017390--Ubiquitinyl_hydrolase_UCH37

Pfam

PF01088--Peptidase_C12

PRINTS

PR00707--UBCTHYDRLASE

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0010016--P:shoot system morphogenesis
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000936 Aegilops tauschii 74.39 9.00e-141 492.00
IUUC-Aml-001866 Ailuropoda melanoleuca 49.69 8.00e-87 313.00
IUUC-Atr-002966 Amborella trichopoda 72.84 3.00e-135 474.00
IUUC-Apl-003306 Anas platyrhynchos 45.43 4.00e-80 291.00
IUUC-Aca-004763 Anolis carolinensis 49.06 3.00e-85 308.00
IUUC-Aly-005581 Arabidopsis lyrata 89.70 3.00e-158 550.00
IUUC-Ath-007283 Arabidopsis thaliana 89.09 3.00e-161 560.00
IUUC-Ago-007999 Ashbya gossypii 42.71 8.00e-31 127.00
IUUC-Acl-008231 Aspergillus clavatus 52.74 3.00e-64 238.00
IUUC-Afl-008557 Aspergillus flavus 44.16 2.00e-63 235.00
IUUC-Afu-008988 Aspergillus fumigatus 53.36 2.00e-62 232.00
IUUC-Ani-009420 Aspergillus nidulans 47.56 1.00e-65 242.00
IUUC-Ang-009859 Aspergillus niger 43.65 5.00e-61 227.00
IUUC-Aor-010145 Aspergillus oryzae 44.16 2.00e-63 235.00
IUUC-Ate-010347 Aspergillus terreus 47.67 3.00e-61 228.00
IUUC-Ame-010791 Astyanax mexicanus 50.00 5.00e-89 320.00
IUUC-Bgr-012298 Blumeria graminis 42.72 2.00e-60 225.00
IUUC-Bta-013251 Bos taurus 49.38 2.00e-86 311.00
IUUC-Bci-013786 Botrytis cinerea 41.84 5.00e-63 234.00
IUUC-Bdi-014132 Brachypodium distachyon 75.15 4.00e-136 476.00
IUUC-Bol-015611 Brassica oleracea 99.09 0.00e+00 636.00
IUUC-Cel-018604 Caenorhabditis elegans 40.73 1.00e-65 242.00
IUUC-Cja-019768 Callithrix jacchus 45.40 2.00e-81 295.00
IUUC-Cfa-020207 Canis familiaris 49.69 8.00e-87 313.00
IUUC-Cpo-021925 Cavia porcellus 47.19 4.00e-80 290.00
IUUC-Cre-022919 Chlamydomonas reinhardtii 50.46 4.00e-85 307.00
IUUC-Csa-023958 Chlorocebus sabaeus 49.06 5.00e-86 310.00
IUUC-Cho-024928 Choloepus hoffmanni 55.41 3.00e-17 82.00
IUUC-Cin-025771 Ciona intestinalis 43.43 5.00e-71 260.00
IUUC-Csv-026149 Ciona savignyi 44.41 6.00e-75 273.00
IUUC-Cgl-026424 Colletotrichum gloeosporioides 36.94 1.00e-49 189.00
IUUC-Cne-026955 Cryptococcus neoformans 34.57 5.00e-49 187.00
IUUC-Cme-027104 Cyanidioschyzon merolae 31.55 1.00e-46 179.00
IUUC-Dre-027409 Danio rerio 49.39 4.00e-87 314.00
IUUC-Dno-028921 Dasypus novemcinctus 49.69 9.00e-87 313.00
IUUC-Dor-030891 Dipodomys ordii 39.30 2.00e-40 160.00
IUUC-Dse-031170 Dothistroma septosporum 41.52 8.00e-61 226.00
IUUC-Dme-031677 Drosophila melanogaster 48.02 1.00e-80 292.00
IUUC-Ete-032646 Echinops telfairi 45.25 8.00e-44 171.00
IUUC-Eca-033776 Equus caballus 48.50 3.00e-78 284.00
IUUC-Eeu-035305 Erinaceus europaeus 45.60 2.00e-39 155.00
IUUC-Fca-035846 Felis catus 45.82 2.00e-82 298.00
IUUC-Fal-037597 Ficedula albicollis 46.77 2.00e-73 268.00
IUUC-Fox-037670 Fusarium oxysporum 42.58 5.00e-52 197.00
IUUC-Fso-038243 Fusarium solani 42.86 3.00e-52 198.00
IUUC-Gmo-038499 Gadus morhua 45.91 9.00e-79 286.00
IUUC-Ggr-039975 Gaeumannomyces graminis 45.27 1.00e-53 202.00
IUUC-Gga-040904 Gallus gallus 49.69 1.00e-89 323.00
IUUC-Gac-042058 Gasterosteus aculeatus 49.37 2.00e-86 312.00
IUUC-Gma-043763 Glycine max 80.18 6.00e-149 519.00
IUUC-Ggo-044699 Gorilla gorilla 46.47 3.00e-75 275.00
IUUC-Hsa-046227 Homo sapiens 49.69 4.00e-87 314.00
IUUC-Hvu-047359 Hordeum vulgare 74.31 3.00e-139 487.00
IUUC-Itr-048989 Ictidomys tridecemlineatus 45.58 6.00e-82 297.00
IUUC-Lch-049829 Latimeria chalumnae 50.00 1.00e-86 312.00
IUUC-Lpe-050899 Leersia perrieri 74.84 3.00e-130 457.00
IUUC-Loc-052264 Lepisosteus oculatus 49.22 4.00e-84 304.00
IUUC-Lma-053110 Leptosphaeria maculans 51.75 8.00e-56 210.00
IUUC-Laf-053639 Loxodonta africana 49.69 8.00e-87 313.00
IUUC-Mcc-055506 Macaca mulatta 49.06 7.00e-86 310.00
IUUC-Meu-056267 Macropus eugenii 42.48 8.00e-50 191.00
IUUC-Mor-057001 Magnaporthe oryzae 46.37 1.00e-57 216.00
IUUC-Mpo-057608 Magnaporthe poae 45.60 2.00e-37 148.00
IUUC-Mtr-057731 Medicago truncatula 76.95 2.00e-145 508.00
IUUC-Mla-059016 Melampsora laricipopulina 46.50 9.00e-45 172.00
IUUC-Mga-060178 Meleagris gallopavo 48.53 7.00e-81 293.00
IUUC-Mvi-060353 Microbotryum violaceum 38.04 3.00e-55 208.00
IUUC-Mmr-060738 Microcebus murinus 49.38 1.00e-86 312.00
IUUC-Mdo-062266 Monodelphis domestica 53.85 7.00e-62 229.00
IUUC-Mmu-063619 Mus musculus 50.00 4.00e-87 314.00
IUUC-Mac-065301 Musa acuminata 78.95 3.00e-151 527.00
IUUC-Mpu-066058 Mustela putorius furo 49.69 6.00e-87 313.00
IUUC-Mlu-067292 Myotis lucifugus 50.31 2.00e-86 311.00
IUUC-Nfi-068275 Neosartorya fischeri 41.98 2.00e-63 235.00
IUUC-Ncr-068713 Neurospora crassa 39.21 4.00e-59 221.00
IUUC-Nle-069013 Nomascus leucogenys 49.06 3.00e-86 311.00
IUUC-Opr-070628 Ochotona princeps 43.93 5.00e-76 277.00
IUUC-Ont-072688 Oreochromis niloticus 48.28 1.00e-84 305.00
IUUC-Oan-073004 Ornithorhynchus anatinus 53.64 4.00e-66 243.00
IUUC-Ocu-074303 Oryctolagus cuniculus 49.69 2.00e-86 313.00
IUUC-Oba-075002 Oryza barthii 72.64 4.00e-137 480.00
IUUC-Obr-076392 Oryza brachyantha 73.27 1.00e-133 468.00
IUUC-Ogl-077271 Oryza glaberrima 72.64 4.00e-137 480.00
IUUC-Ogu-078493 Oryza glumaepatula 72.95 4.00e-138 483.00
IUUC-Oin-080084 Oryza indica 72.95 4.00e-138 483.00
IUUC-Olo-080803 Oryza longistaminata 72.64 9.00e-138 482.00
IUUC-Ome-081146 Oryza meridionalis 72.04 1.00e-136 478.00
IUUC-Oni-082146 Oryza nivara 72.95 4.00e-138 483.00
IUUC-Opu-083633 Oryza punctata 73.58 2.00e-132 464.00
IUUC-Oru-084789 Oryza rufipogon 72.95 4.00e-138 483.00
IUUC-Osa-086196 Oryza sativa 72.95 4.00e-138 483.00
IUUC-Ola-087126 Oryzias latipes 49.37 1.00e-84 305.00
IUUC-Olu-087665 Ostreococcus lucimarinus 46.33 1.00e-73 269.00
IUUC-Oga-089140 Otolemur garnettii 45.53 7.00e-82 296.00
IUUC-Oar-090296 Ovis aries 49.84 4.00e-86 310.00
IUUC-Ptr-090566 Pan troglodytes 49.69 4.00e-87 314.00
IUUC-Pan-092052 Papio anubis 49.06 6.00e-86 310.00
IUUC-Psi-093723 Pelodiscus sinensis 47.83 4.00e-77 281.00
IUUC-Pma-094568 Petromyzon marinus 42.52 2.00e-62 231.00
IUUC-Pno-095120 Phaeosphaeria nodorum 50.00 9.00e-56 209.00
IUUC-Ppa-095761 Physcomitrella patens 69.97 9.00e-133 466.00
IUUC-Pfo-096210 Poecilia formosa 48.74 1.00e-85 308.00
IUUC-Pab-098463 Pongo abelii 49.69 3.00e-87 314.00
IUUC-Pop-099109 Populus trichocarpa 73.27 2.00e-140 491.00
IUUC-Pca-100108 Procavia capensis 53.53 2.00e-71 262.00
IUUC-Ppe-101176 Prunus persica 77.81 5.00e-144 503.00
IUUC-Pva-102629 Pteropus vampyrus 53.97 3.00e-73 268.00
IUUC-Pgr-103419 Puccinia graminis 44.49 2.00e-55 209.00
IUUC-Pte-104207 Pyrenophora teres 52.73 2.00e-39 154.00
IUUC-Pyt-104471 Pyrenophora triticirepentis 40.73 2.00e-60 225.00
IUUC-Rno-105579 Rattus norvegicus 42.86 1.00e-73 269.00
IUUC-Sha-106894 Sarcophilus harrisii 48.24 2.00e-73 268.00
IUUC-Sja-107732 Schizosaccharomyces japonicus 41.39 4.00e-66 244.00
IUUC-Spo-108371 Schizosaccharomyces pombe 44.68 9.00e-73 266.00
IUUC-Ssl-108467 Sclerotinia sclerotiorum 40.85 2.00e-50 192.00
IUUC-Smo-109396 Selaginella moellendorffii 72.09 1.00e-130 458.00
IUUC-Sit-110630 Setaria italica 73.03 1.00e-135 475.00
IUUC-Sly-110972 Solanum lycopersicum 79.49 1.00e-146 511.00
IUUC-Stu-112185 Solanum tuberosum 80.66 9.00e-159 552.00
IUUC-Sar-113294 Sorex araneus 55.74 1.00e-56 213.00
IUUC-Sbi-113951 Sorghum bicolor 72.42 2.00e-132 464.00
IUUC-Ssc-115501 Sus scrofa 48.23 2.00e-80 291.00
IUUC-Tgu-117152 Taeniopygia guttata 46.77 2.00e-73 268.00
IUUC-Tru-118388 Takifugu rubripes 48.74 7.00e-86 310.00
IUUC-Tsy-119109 Tarsius syrichta 49.69 4.00e-87 314.00
IUUC-Tni-120048 Tetraodon nigroviridis 48.74 3.00e-86 311.00
IUUC-Tca-121750 Theobroma cacao 77.91 3.00e-153 533.00
IUUC-Tre-122130 Trichoderma reesei 40.89 5.00e-58 217.00
IUUC-Tvi-122284 Trichoderma virens 46.54 5.00e-54 204.00
IUUC-Tae-124082 Triticum aestivum 74.92 4.00e-141 493.00
IUUC-Tur-126366 Triticum urartu 63.26 7.00e-103 367.00
IUUC-Tme-127187 Tuber melanosporum 44.66 2.00e-69 255.00
IUUC-Tbe-127619 Tupaia belangeri 42.86 1.00e-59 222.00
IUUC-Ttr-128867 Tursiops truncatus 47.37 2.00e-60 225.00
IUUC-Vda-129912 Verticillium dahliae 39.07 1.00e-56 212.00
IUUC-Vpa-130552 Vicugna pacos 54.11 6.00e-62 230.00
IUUC-Vvi-130881 Vitis vinifera 78.14 1.00e-146 511.00
IUUC-Xtr-131934 Xenopus tropicalis 50.31 5.00e-91 327.00
IUUC-Xma-133312 Xiphophorus maculatus 48.74 9.00e-86 309.00
IUUC-Yli-134487 Yarrowia lipolytica 41.28 2.00e-51 195.00
IUUC-Zma-135639 Zea mays 62.57 1.00e-122 432.00
Created Date 25-Jun-2017

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