iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058763

Ensembl Protein ID

AES95185

UniProt Accession

Q155U2; Q155U2_MEDTR

Genbank Protein ID

ABG27020.1; ACJ84134.1; ACJ85945.1; AES95185.1; AFK39072.1

Protein Name

Putative uncharacterized protein; SCF ubiquitin ligase, SKP1 component; SKP1-like b

Genbank Nucleotide ID

DQ641946; BT051470; BT053285; CM001221; BT139277

Gene Name

MTR_5g022730

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_5g022730	AES95185	AES95185

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	2.00e-31	109.3	106	153

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           k+LLdltc+tVadmikgktpeeiRktFni+nDf+peEe++vR+EnqWA
   Q: 106  KNLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPEEEEEVRRENQWA 153
           79*********************************************9 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSSTRKITLK SSDGETFEVD EAVALESQTI KHMIEDDCAD SGIPLPNVTS KILAKVIEYC 60
KKHVDAAAAE EKPNEDELKS WDSEFVKVDQ ATLFDLILAA NYLNIKNLLD LTCQTVADMI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGCACTATA AATAAACCCC TCACGCCCAT AGTTTTACAC ATTCTGTTTC TCTATTTTCC 60
GATTCAGAAA AAATTAGGGT TTTTATTTCT CGTAAAGGGG AAGAACAATT TCCAATTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0016874--F:ligase activity
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

mtr:MTR_5g022730

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000465	Aegilops tauschii	77.56	3.00e-62	229.00
IUUC-Atr-002858	Amborella trichopoda	85.53	1.00e-61	227.00
IUUC-Aly-006066	Arabidopsis lyrata	79.88	3.00e-66	243.00
IUUC-Ath-006881	Arabidopsis thaliana	76.61	3.00e-66	243.00
IUUC-Bol-015842	Brassica oleracea	82.39	5.00e-69	252.00
IUUC-Bra-016913	Brassica rapa	82.39	5.00e-69	252.00
IUUC-Csa-023459	Chlorocebus sabaeus	57.23	7.00e-38	149.00
IUUC-Ete-033117	Echinops telfairi	58.23	1.00e-36	144.00
IUUC-Lpe-050890	Leersia perrieri	76.54	4.00e-55	206.00
IUUC-Oba-075368	Oryza barthii	73.94	3.00e-60	223.00
IUUC-Ogl-077679	Oryza glaberrima	73.94	3.00e-60	223.00
IUUC-Ogu-078125	Oryza glumaepatula	73.33	2.00e-60	224.00
IUUC-Opu-083714	Oryza punctata	76.51	2.00e-57	213.00
IUUC-Oru-085023	Oryza rufipogon	74.51	6.00e-55	205.00
IUUC-Ppe-101503	Prunus persica	89.10	2.00e-73	267.00
IUUC-Smo-109307	Selaginella moellendorffii	78.85	2.00e-62	230.00
IUUC-Sly-111529	Solanum lycopersicum	85.81	6.00e-71	258.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence