iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114875

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G212600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g027230	Sb03g027230.1	Sb03g027230.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.10e-40	139.4	10	152

Active Site

Position(s)	Description	Evidence
95	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    Rlkkelkelekdppegisakpvdesd....ltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilk..eee 90
           R++ke+k l +dpp+g+s++++++++    l  +e+ i+Gpe+t+Y++gvF l+i++pe+YPf+PP+++f+t+i+hPn+++ G++Cl+il+  ++ 
   Q: 10   RMQKEIKLLLDDPPHGVSLNLSEDENvlssLSSIEARIEGPEGTVYANGVFILKIQIPERYPFQPPNMTFVTPIYHPNIDNGGRICLDILNlpPKG 105
           89**********************999999999*********************************************************98899* PP
   S: 91   kWspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkv 137
           +W+p l++++vl+si  ll++pnp+++l +e+++++k n++ ++ ++
   Q: 106  AWQPSLNISTVLTSIGLLLSDPNPDDGLMAEISREYKYNKQVFDINA 152
           *****************************************998776 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAQAKRLNLR MQKEIKLLLD DPPHGVSLNL SEDENVLSSL SSIEARIEGP EGTVYANGVF 60
ILKIQIPERY PFQPPNMTFV TPIYHPNIDN GGRICLDILN LPPKGAWQPS LNISTVLTSI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCATCCCGT GGCCTTTCTT CCGGCCTCCC AGTCCCAGCC GCTGGGACTA AGGACTGGCC 60
GAGCGCCGAC GCCGTCCTAC GCCAGGTGCC CAGGTCTTCG TCGGGCCCTT CGCCAGGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0006974--P:cellular response to DNA damage stimulus
GO:0000209--P:protein polyubiquitination

KEGG

sbi:SORBI_03g027230

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000366	Aegilops tauschii	58.09	5.00e-139	487.00
IUUC-Aml-001392	Ailuropoda melanoleuca	58.28	2.00e-51	194.00
IUUC-Atr-003069	Amborella trichopoda	68.75	5.00e-66	243.00
IUUC-Apl-003914	Anas platyrhynchos	60.53	6.00e-52	195.00
IUUC-Aca-004381	Anolis carolinensis	56.05	1.00e-50	191.00
IUUC-Aly-006059	Arabidopsis lyrata	70.93	3.00e-71	261.00
IUUC-Ath-007669	Arabidopsis thaliana	64.97	7.00e-69	253.00
IUUC-Ame-011372	Astyanax mexicanus	56.05	5.00e-51	192.00
IUUC-Bta-012479	Bos taurus	56.95	4.00e-49	186.00
IUUC-Bdi-014043	Brachypodium distachyon	56.32	6.00e-168	583.00
IUUC-Bol-016011	Brassica oleracea	73.17	3.00e-67	248.00
IUUC-Bra-017419	Brassica rapa	70.29	4.00e-67	247.00
IUUC-Cja-019773	Callithrix jacchus	58.28	7.00e-51	192.00
IUUC-Cfa-020043	Canis familiaris	58.94	5.00e-51	192.00
IUUC-Cpo-021481	Cavia porcellus	56.95	2.00e-50	191.00
IUUC-Cre-022823	Chlamydomonas reinhardtii	45.39	1.00e-28	117.00
IUUC-Csa-024083	Chlorocebus sabaeus	58.28	2.00e-50	191.00
IUUC-Cho-024386	Choloepus hoffmanni	58.28	3.00e-50	190.00
IUUC-Cin-025419	Ciona intestinalis	51.63	2.00e-44	170.00
IUUC-Csv-026224	Ciona savignyi	45.10	3.00e-47	180.00
IUUC-Cme-027179	Cyanidioschyzon merolae	45.39	2.00e-30	124.00
IUUC-Dre-028800	Danio rerio	59.60	6.00e-50	189.00
IUUC-Dno-029833	Dasypus novemcinctus	57.62	2.00e-50	190.00
IUUC-Ete-032625	Echinops telfairi	57.62	1.00e-43	167.00
IUUC-Eca-033821	Equus caballus	58.28	3.00e-50	189.00
IUUC-Eeu-034578	Erinaceus europaeus	74.73	3.00e-40	156.00
IUUC-Fca-036398	Felis catus	49.76	4.00e-52	196.00
IUUC-Fal-037564	Ficedula albicollis	58.94	7.00e-51	192.00
IUUC-Gmo-039142	Gadus morhua	58.94	1.00e-51	194.00
IUUC-Gga-041054	Gallus gallus	59.87	1.00e-51	194.00
IUUC-Gac-041370	Gasterosteus aculeatus	55.63	2.00e-47	180.00
IUUC-Ggo-045370	Gorilla gorilla	56.95	1.00e-49	187.00
IUUC-Hsa-046513	Homo sapiens	57.62	5.00e-50	189.00
IUUC-Hvu-047694	Hordeum vulgare	63.56	1.00e-113	402.00
IUUC-Itr-049076	Ictidomys tridecemlineatus	58.82	2.00e-51	194.00
IUUC-Lch-050484	Latimeria chalumnae	55.13	8.00e-45	172.00
IUUC-Lpe-051409	Leersia perrieri	38.82	1.00e-69	256.00
IUUC-Loc-051967	Lepisosteus oculatus	56.86	1.00e-48	184.00
IUUC-Laf-053377	Loxodonta africana	60.26	1.00e-51	195.00
IUUC-Mcc-055453	Macaca mulatta	58.28	2.00e-50	191.00
IUUC-Meu-056745	Macropus eugenii	58.28	1.00e-49	187.00
IUUC-Mga-059729	Meleagris gallopavo	59.21	9.00e-52	195.00
IUUC-Mmr-060581	Microcebus murinus	48.29	2.00e-50	191.00
IUUC-Mdo-062434	Monodelphis domestica	58.94	6.00e-50	191.00
IUUC-Mmu-064379	Mus musculus	56.29	1.00e-48	184.00
IUUC-Mac-064647	Musa acuminata	75.88	1.00e-66	244.00
IUUC-Mpu-066713	Mustela putorius furo	58.94	6.00e-51	192.00
IUUC-Mlu-067525	Myotis lucifugus	56.29	6.00e-49	185.00
IUUC-Nle-069757	Nomascus leucogenys	58.28	2.00e-50	191.00
IUUC-Opr-070756	Ochotona princeps	55.63	3.00e-50	190.00
IUUC-Ont-071956	Oreochromis niloticus	56.95	3.00e-50	189.00
IUUC-Oan-072745	Ornithorhynchus anatinus	60.25	1.00e-50	191.00
IUUC-Ocu-074423	Oryctolagus cuniculus	59.60	7.00e-52	195.00
IUUC-Oba-075569	Oryza barthii	56.47	1.00e-150	525.00
IUUC-Obr-076131	Oryza brachyantha	55.32	2.00e-153	535.00
IUUC-Ogl-077132	Oryza glaberrima	56.47	1.00e-150	525.00
IUUC-Ogu-078880	Oryza glumaepatula	60.35	2.00e-165	574.00
IUUC-Oin-079748	Oryza indica	59.32	3.00e-163	567.00
IUUC-Olo-080501	Oryza longistaminata	58.60	5.00e-162	563.00
IUUC-Ome-081248	Oryza meridionalis	56.47	5.00e-152	530.00
IUUC-Oni-083033	Oryza nivara	59.32	9.00e-164	569.00
IUUC-Opu-083664	Oryza punctata	60.35	1.00e-164	572.00
IUUC-Oru-084580	Oryza rufipogon	59.50	4.00e-164	570.00
IUUC-Osa-085721	Oryza sativa	59.50	4.00e-164	570.00
IUUC-Ola-087559	Oryzias latipes	54.97	2.00e-47	181.00
IUUC-Oga-088420	Otolemur garnettii	58.28	3.00e-50	190.00
IUUC-Oar-090082	Ovis aries	54.25	2.00e-46	177.00
IUUC-Ptr-091134	Pan troglodytes	57.62	3.00e-50	190.00
IUUC-Pan-091735	Papio anubis	58.28	2.00e-50	191.00
IUUC-Psi-094064	Pelodiscus sinensis	58.55	8.00e-51	192.00
IUUC-Pma-094609	Petromyzon marinus	54.97	1.00e-47	181.00
IUUC-Ppa-095553	Physcomitrella patens	58.71	2.00e-54	205.00
IUUC-Pfo-096710	Poecilia formosa	55.63	6.00e-49	186.00
IUUC-Pab-098126	Pongo abelii	57.62	5.00e-50	189.00
IUUC-Pop-099108	Populus trichocarpa	75.61	3.00e-73	268.00
IUUC-Pca-100338	Procavia capensis	60.26	8.00e-52	195.00
IUUC-Ppe-101239	Prunus persica	58.40	5.00e-61	228.00
IUUC-Pva-102756	Pteropus vampyrus	70.59	3.00e-43	166.00
IUUC-Rno-105211	Rattus norvegicus	56.29	1.00e-48	185.00
IUUC-Sha-106969	Sarcophilus harrisii	50.63	3.00e-39	153.00
IUUC-Smo-109052	Selaginella moellendorffii	55.13	2.00e-45	173.00
IUUC-Sit-110464	Setaria italica	73.14	0.00e+00	729.00
IUUC-Sly-110971	Solanum lycopersicum	72.78	2.00e-65	242.00
IUUC-Stu-112126	Solanum tuberosum	63.01	1.00e-69	256.00
IUUC-Sar-113633	Sorex araneus	58.28	3.00e-50	190.00
IUUC-Ssc-116375	Sus scrofa	57.33	2.00e-48	184.00
IUUC-Tgu-117292	Taeniopygia guttata	59.60	5.00e-50	189.00
IUUC-Tru-118157	Takifugu rubripes	50.33	1.00e-40	157.00
IUUC-Tsy-119260	Tarsius syrichta	58.94	1.00e-50	191.00
IUUC-Tni-120162	Tetraodon nigroviridis	53.16	5.00e-48	182.00
IUUC-Tca-121255	Theobroma cacao	76.22	6.00e-60	224.00
IUUC-Tae-123184	Triticum aestivum	58.27	4.00e-140	491.00
IUUC-Tbe-127296	Tupaia belangeri	57.62	3.00e-50	190.00
IUUC-Ttr-128443	Tursiops truncatus	55.84	1.00e-48	184.00
IUUC-Vpa-130689	Vicugna pacos	56.95	2.00e-49	187.00
IUUC-Vvi-130925	Vitis vinifera	72.94	2.00e-65	240.00
IUUC-Xma-133779	Xiphophorus maculatus	55.63	3.00e-49	186.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence