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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-007062
Ensembl Protein ID AT3G11950.4
UniProt Accession Q9SF04; Q9SF04_ARATH
Genbank Protein ID AAF23211.1; AEE75127.1; AEE75128.1; ANM64474.1; ANM64475.1; ANM64476.1; BAB03105.1; BAE98730.1
Protein Name F26K24.24 protein; Putative uncharacterized protein At3g11950; TRAF-like superfamily protein
Genbank Nucleotide ID AC016795; CP002686; CP002686; CP002686; CP002686; CP002686; AP002040; AK226618
Gene Name F26K24.24; At3g11950
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G11950 AT3G11950.4 AT3G11950.4
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 24.84 3.00e-07 55.10 IUUC-Hsa-046702
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MDPPVSDLES IEDQKEGGPS FHCDLYDTQV VHKIAQVFLP GLATACVDNT TGDIFRSPGS 60
VAADIRKEMI EYLTRRSETF VAEHIVLQGG SEIEASHDPF DIISDFIDDF ATSKRNLFSR 120
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Protein Fasta Sequence


>IUUC-Ath-007062|E3,RING|Arabidopsis thaliana
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Nucleotide Sequence
(Fasta)
ATAAAAAAAT AAAAATAAAG GAGGAGAGAG TCCGTTTTTA ATAGAAGAGG CGACGAAGTT 60
GTGGTAAAAG AGAAAAAGAG ACCCGTTTAT TGCGCCAAAA CCAGAGAGGT GCTTCTCTCT 120
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Nucleotide Fasta Sequence


>IUUC-Ath-007062|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR008974--TRAF-like
IPR013083--Znf_RING/FYVE/PHD
IPR001293--Znf_TRAF
PROSITE

PS50145--ZF_TRAF
Pfam

PF02176--zf-TRAF
Gene Ontology

GO:0009507--C:chloroplast
GO:0009941--C:chloroplast envelope
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
KEGG ath:AT3G11950
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000797 Aegilops tauschii 43.57 2.00e-82 298.00
IUUC-Aml-001288 Ailuropoda melanoleuca 24.53 1.00e-07 50.80
IUUC-Atr-003147 Amborella trichopoda 51.12 1.00e-97 348.00
IUUC-Aca-004687 Anolis carolinensis 25.71 8.00e-08 51.20
IUUC-Aly-006415 Arabidopsis lyrata 92.50 0.00e+00 890.00
IUUC-Ame-010645 Astyanax mexicanus 29.45 6.00e-07 48.50
IUUC-Bta-012558 Bos taurus 23.19 6.00e-08 52.00
IUUC-Bdi-014180 Brachypodium distachyon 43.11 3.00e-79 287.00
IUUC-Bol-015913 Brassica oleracea 59.36 0.00e+00 725.00
IUUC-Bra-017948 Brassica rapa 65.53 0.00e+00 752.00
IUUC-Cja-019589 Callithrix jacchus 23.40 5.00e-08 52.00
IUUC-Cfa-020639 Canis familiaris 31.25 1.00e-09 57.00
IUUC-Cpo-021878 Cavia porcellus 24.84 2.00e-08 53.10
IUUC-Csa-024172 Chlorocebus sabaeus 24.22 2.00e-08 53.50
IUUC-Cho-024532 Choloepus hoffmanni 22.56 2.00e-06 47.00
IUUC-Dre-027557 Danio rerio 28.30 3.00e-07 49.70
IUUC-Dno-029458 Dasypus novemcinctus 28.57 6.00e-07 48.50
IUUC-Dor-030469 Dipodomys ordii 22.50 4.00e-08 52.40
IUUC-Ete-032910 Echinops telfairi 21.05 2.00e-05 43.90
IUUC-Eca-033786 Equus caballus 23.60 3.00e-07 49.30
IUUC-Fca-036026 Felis catus 23.73 2.00e-07 50.10
IUUC-Fal-036842 Ficedula albicollis 27.37 1.00e-10 60.80
IUUC-Gmo-039061 Gadus morhua 27.34 1.00e-08 54.30
IUUC-Gga-040519 Gallus gallus 27.27 3.00e-11 62.80
IUUC-Gma-042951 Glycine max 56.98 2.00e-122 432.00
IUUC-Ggo-044762 Gorilla gorilla 24.53 6.00e-08 52.00
IUUC-Hsa-046702 Homo sapiens 24.84 1.00e-08 54.30
IUUC-Hvu-047127 Hordeum vulgare 45.70 2.00e-85 308.00
IUUC-Itr-048232 Ictidomys tridecemlineatus 31.68 9.00e-07 47.80
IUUC-Lpe-051100 Leersia perrieri 45.37 1.00e-85 309.00
IUUC-Loc-052170 Lepisosteus oculatus 26.12 5.00e-12 65.50
IUUC-Laf-053476 Loxodonta africana 21.83 1.00e-07 50.40
IUUC-Mcc-054878 Macaca mulatta 24.22 2.00e-08 53.50
IUUC-Meu-055909 Macropus eugenii 29.07 3.00e-04 40.00
IUUC-Mga-060145 Meleagris gallopavo 26.97 3.00e-11 62.40
IUUC-Mmr-061198 Microcebus murinus 31.68 1.00e-06 47.40
IUUC-Mdo-062585 Monodelphis domestica 33.66 4.00e-07 48.90
IUUC-Mmu-064303 Mus musculus 30.69 2.00e-06 46.20
IUUC-Mac-064529 Musa acuminata 52.49 6.00e-101 360.00
IUUC-Mpu-066854 Mustela putorius furo 32.67 5.00e-07 48.50
IUUC-Mlu-067192 Myotis lucifugus 26.09 1.00e-09 57.40
IUUC-Nle-069250 Nomascus leucogenys 24.22 3.00e-08 52.80
IUUC-Opr-071122 Ochotona princeps 26.87 6.00e-06 45.10
IUUC-Ont-072459 Oreochromis niloticus 30.25 7.00e-09 55.10
IUUC-Ocu-073755 Oryctolagus cuniculus 23.60 2.00e-07 50.40
IUUC-Oba-075457 Oryza barthii 45.43 3.00e-87 314.00
IUUC-Obr-076500 Oryza brachyantha 46.57 2.00e-92 331.00
IUUC-Ogl-077708 Oryza glaberrima 44.18 3.00e-87 314.00
IUUC-Ogu-078803 Oryza glumaepatula 45.16 1.00e-86 312.00
IUUC-Oin-079307 Oryza indica 47.11 1.00e-84 306.00
IUUC-Olo-080508 Oryza longistaminata 47.13 5.00e-85 306.00
IUUC-Ome-081269 Oryza meridionalis 44.18 8.00e-88 316.00
IUUC-Oni-082966 Oryza nivara 44.71 1.00e-86 312.00
IUUC-Opu-083468 Oryza punctata 44.78 9.00e-88 316.00
IUUC-Oru-085055 Oryza rufipogon 45.16 2.00e-86 311.00
IUUC-Osa-085780 Oryza sativa 46.81 6.00e-84 303.00
IUUC-Ola-087319 Oryzias latipes 33.98 7.00e-10 58.20
IUUC-Olu-087748 Ostreococcus lucimarinus 29.21 9.00e-20 90.50
IUUC-Oar-090003 Ovis aries 28.36 3.00e-07 49.70
IUUC-Ptr-091465 Pan troglodytes 24.22 2.00e-08 53.10
IUUC-Pan-092301 Papio anubis 24.22 2.00e-08 53.50
IUUC-Psi-093956 Pelodiscus sinensis 29.10 5.00e-09 55.50
IUUC-Pma-094463 Petromyzon marinus 30.70 3.00e-07 48.90
IUUC-Pfo-096912 Poecilia formosa 31.97 9.00e-09 54.70
IUUC-Pab-097604 Pongo abelii 24.22 2.00e-08 53.50
IUUC-Pop-099898 Populus trichocarpa 62.67 4.00e-139 487.00
IUUC-Pca-100958 Procavia capensis 26.71 3.00e-07 48.50
IUUC-Ppe-101547 Prunus persica 52.28 2.00e-112 399.00
IUUC-Pva-102112 Pteropus vampyrus 23.60 7.00e-08 51.60
IUUC-Rno-105077 Rattus norvegicus 20.45 8.00e-08 51.20
IUUC-Sha-107492 Sarcophilus harrisii 23.63 2.00e-09 57.00
IUUC-Sit-109710 Setaria italica 41.90 6.00e-74 270.00
IUUC-Sbi-113900 Sorghum bicolor 44.78 3.00e-88 317.00
IUUC-Ssc-116427 Sus scrofa 24.22 3.00e-08 52.80
IUUC-Tgu-117408 Taeniopygia guttata 29.80 6.00e-10 58.50
IUUC-Tru-117964 Takifugu rubripes 30.56 5.00e-07 48.90
IUUC-Tsy-119571 Tarsius syrichta 24.07 2.00e-05 43.10
IUUC-Tur-126067 Triticum urartu 43.30 1.00e-80 291.00
IUUC-Tbe-127412 Tupaia belangeri 22.98 2.00e-07 50.10
IUUC-Ttr-128492 Tursiops truncatus 24.22 5.00e-08 52.00
IUUC-Vpa-130751 Vicugna pacos 30.39 1.00e-06 47.00
IUUC-Vvi-131070 Vitis vinifera 62.53 2.00e-141 494.00
IUUC-Xtr-132721 Xenopus tropicalis 24.84 4.00e-06 45.80
IUUC-Xma-133132 Xiphophorus maculatus 30.33 2.00e-09 57.00
Created Date 25-Jun-2017

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