iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggr-040019

Ensembl Protein ID

GGTG_00681T0

UniProt Accession

J3NHE4; J3NHE4_GAGT3

Genbank Protein ID

EJT80687.1

Protein Name

Poly(A)+ RNA export protein

Genbank Nucleotide ID

ADBI01000070

Gene Name

GGTG_00681

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GGTG_00681	GGTG_00681T0	GGTG_00681T0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-25	87.0	118	154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd..tllvsGsdDgtikvWDlrtgv 34
           H  +v+c++f  ++  +++++Gs+D+t+k WDlr+++
   Q: 118  HDRPVRCVRFfdNGgsPMVITGSWDKTVKYWDLRQQT 154
           999******99933469****************9986 PP

Organism

Gaeumannomyces graminis

Protein Sequence
(Fasta)

MSGLFGQPAA APTSTIGDLK NDVAIANPPE DSISDLAFNP NPSDQKDFLA VASWDKKVRI 60
YEVLSNGTAE GKHMYEHDGP VFSCDYYKDG TKIVSGGADK MAKVCDVTTG VTAQVAQHDR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTGCCTTCA AGGATCACCG ACGCGTTGAC TAGCACCGAA CCGTGTCTGG GCTGAGCCGA 60
ACCATTTTGA CCCTTACAAC AGCTACCTTT CCAAGGGCAC ACAACCTTTT GAACCAGACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005643--C:nuclear pore
GO:0016973--P:poly(A)+ mRNA export from nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000293	Aegilops tauschii	38.33	6.00e-70	256.00
IUUC-Aml-002179	Ailuropoda melanoleuca	42.77	2.00e-73	267.00
IUUC-Atr-002609	Amborella trichopoda	43.71	4.00e-79	286.00
IUUC-Apl-003637	Anas platyrhynchos	43.66	5.00e-76	276.00
IUUC-Aca-005042	Anolis carolinensis	43.07	5.00e-74	269.00
IUUC-Aly-006015	Arabidopsis lyrata	44.41	5.00e-79	286.00
IUUC-Ath-007659	Arabidopsis thaliana	42.82	2.00e-79	287.00
IUUC-Ago-008004	Ashbya gossypii	49.86	3.00e-101	359.00
IUUC-Acl-008030	Aspergillus clavatus	67.92	1.00e-145	507.00
IUUC-Afl-008636	Aspergillus flavus	66.76	1.00e-144	504.00
IUUC-Afu-009121	Aspergillus fumigatus	66.18	7.00e-144	501.00
IUUC-Ani-009238	Aspergillus nidulans	65.30	1.00e-144	504.00
IUUC-Ang-009801	Aspergillus niger	65.93	4.00e-149	518.00
IUUC-Aor-009974	Aspergillus oryzae	66.76	1.00e-144	504.00
IUUC-Ate-010406	Aspergillus terreus	67.15	2.00e-144	503.00
IUUC-Ame-011368	Astyanax mexicanus	44.21	4.00e-76	276.00
IUUC-Bgr-012233	Blumeria graminis	64.19	3.00e-142	496.00
IUUC-Bta-012856	Bos taurus	42.77	2.00e-73	267.00
IUUC-Bci-013964	Botrytis cinerea	62.36	1.00e-137	481.00
IUUC-Bdi-014049	Brachypodium distachyon	41.54	4.00e-77	280.00
IUUC-Bol-016601	Brassica oleracea	44.41	1.00e-77	281.00
IUUC-Bra-017292	Brassica rapa	44.71	3.00e-78	283.00
IUUC-Cel-018563	Caenorhabditis elegans	38.66	1.00e-66	245.00
IUUC-Cja-019700	Callithrix jacchus	42.48	2.00e-73	267.00
IUUC-Cfa-020337	Canis familiaris	42.48	2.00e-73	267.00
IUUC-Cpo-021858	Cavia porcellus	43.07	4.00e-74	270.00
IUUC-Cre-022748	Chlamydomonas reinhardtii	43.82	2.00e-74	271.00
IUUC-Csa-023322	Chlorocebus sabaeus	42.48	1.00e-73	268.00
IUUC-Cho-024930	Choloepus hoffmanni	36.83	8.00e-58	215.00
IUUC-Cin-025393	Ciona intestinalis	39.77	7.00e-74	269.00
IUUC-Csv-026093	Ciona savignyi	40.17	2.00e-74	271.00
IUUC-Cgl-026503	Colletotrichum gloeosporioides	62.57	2.00e-130	456.00
IUUC-Cne-026774	Cryptococcus neoformans	46.11	6.00e-81	292.00
IUUC-Cme-027243	Cyanidioschyzon merolae	37.81	2.00e-68	251.00
IUUC-Dre-028159	Danio rerio	43.62	6.00e-76	276.00
IUUC-Dno-028852	Dasypus novemcinctus	42.48	2.00e-73	267.00
IUUC-Dor-030318	Dipodomys ordii	37.43	2.00e-59	220.00
IUUC-Dse-031161	Dothistroma septosporum	56.95	4.00e-123	432.00
IUUC-Dme-032009	Drosophila melanogaster	44.48	3.00e-78	283.00
IUUC-Eca-033306	Equus caballus	42.48	5.00e-73	266.00
IUUC-Fca-035579	Felis catus	42.48	2.00e-73	267.00
IUUC-Fal-037582	Ficedula albicollis	43.95	1.00e-76	278.00
IUUC-Fox-037772	Fusarium oxysporum	74.71	1.00e-160	557.00
IUUC-Fso-038368	Fusarium solani	74.30	1.00e-160	557.00
IUUC-Gmo-038500	Gadus morhua	43.92	2.00e-75	274.00
IUUC-Gga-040684	Gallus gallus	43.95	2.00e-76	277.00
IUUC-Gac-042592	Gasterosteus aculeatus	44.21	1.00e-76	278.00
IUUC-Gma-043437	Glycine max	44.15	1.00e-78	285.00
IUUC-Ggo-044965	Gorilla gorilla	42.48	4.00e-73	266.00
IUUC-Hsa-046779	Homo sapiens	43.13	5.00e-70	256.00
IUUC-Hvu-047380	Hordeum vulgare	43.09	2.00e-72	264.00
IUUC-Itr-048819	Ictidomys tridecemlineatus	42.77	7.00e-74	269.00
IUUC-Kpa-049284	Komagataella pastoris	51.46	5.00e-107	379.00
IUUC-Lch-050559	Latimeria chalumnae	37.64	3.00e-64	237.00
IUUC-Lpe-051050	Leersia perrieri	42.68	3.00e-77	280.00
IUUC-Loc-052874	Lepisosteus oculatus	45.10	2.00e-78	284.00
IUUC-Lma-053085	Leptosphaeria maculans	58.47	2.00e-122	430.00
IUUC-Laf-053980	Loxodonta africana	42.48	3.00e-73	266.00
IUUC-Mcc-055408	Macaca mulatta	42.48	2.00e-73	267.00
IUUC-Meu-056551	Macropus eugenii	39.82	3.00e-64	236.00
IUUC-Mor-057248	Magnaporthe oryzae	87.99	0.00e+00	660.00
IUUC-Mpo-057390	Magnaporthe poae	97.76	0.00e+00	731.00
IUUC-Mtr-057675	Medicago truncatula	45.05	5.00e-80	289.00
IUUC-Mla-059155	Melampsora laricipopulina	47.58	1.00e-96	344.00
IUUC-Mga-060140	Meleagris gallopavo	43.56	3.00e-67	246.00
IUUC-Mvi-060311	Microbotryum violaceum	54.82	1.00e-105	374.00
IUUC-Mmr-061533	Microcebus murinus	42.77	7.00e-74	269.00
IUUC-Mdo-062593	Monodelphis domestica	43.07	4.00e-74	270.00
IUUC-Mmu-063362	Mus musculus	42.48	3.00e-73	266.00
IUUC-Mac-064968	Musa acuminata	40.96	1.00e-71	261.00
IUUC-Mpu-065722	Mustela putorius furo	42.77	3.00e-73	267.00
IUUC-Mlu-068124	Myotis lucifugus	42.18	6.00e-73	266.00
IUUC-Nfi-068595	Neosartorya fischeri	66.47	1.00e-143	501.00
IUUC-Ncr-068790	Neurospora crassa	76.75	3.00e-173	598.00
IUUC-Nle-069273	Nomascus leucogenys	37.43	5.00e-59	219.00
IUUC-Opr-070320	Ochotona princeps	39.53	4.00e-65	240.00
IUUC-Ont-071303	Oreochromis niloticus	43.62	4.00e-76	276.00
IUUC-Oan-073724	Ornithorhynchus anatinus	43.49	9.00e-75	272.00
IUUC-Ocu-074961	Oryctolagus cuniculus	42.81	2.00e-69	254.00
IUUC-Oba-075879	Oryza barthii	42.47	3.00e-76	277.00
IUUC-Obr-076326	Oryza brachyantha	41.01	5.00e-77	279.00
IUUC-Ogl-077767	Oryza glaberrima	41.01	2.00e-77	280.00
IUUC-Ogu-078760	Oryza glumaepatula	42.51	3.00e-76	276.00
IUUC-Oin-080219	Oryza indica	41.01	2.00e-77	280.00
IUUC-Olo-081007	Oryza longistaminata	41.01	2.00e-77	280.00
IUUC-Ome-081848	Oryza meridionalis	40.00	2.00e-72	264.00
IUUC-Oni-082844	Oryza nivara	41.01	2.00e-77	280.00
IUUC-Opu-083511	Oryza punctata	39.77	9.00e-72	262.00
IUUC-Oru-085012	Oryza rufipogon	41.01	2.00e-77	280.00
IUUC-Osa-085287	Oryza sativa	41.01	2.00e-77	280.00
IUUC-Ola-087292	Oryzias latipes	43.92	3.00e-77	280.00
IUUC-Olu-087689	Ostreococcus lucimarinus	45.48	2.00e-87	313.00
IUUC-Oga-088821	Otolemur garnettii	42.48	2.00e-73	267.00
IUUC-Oar-090253	Ovis aries	42.48	2.00e-73	267.00
IUUC-Ptr-091097	Pan troglodytes	41.84	2.00e-73	267.00
IUUC-Pan-091835	Papio anubis	42.48	2.00e-73	267.00
IUUC-Psi-093000	Pelodiscus sinensis	43.36	9.00e-75	272.00
IUUC-Pma-094273	Petromyzon marinus	42.09	5.00e-75	272.00
IUUC-Pno-094920	Phaeosphaeria nodorum	59.78	2.00e-119	419.00
IUUC-Ppa-095202	Physcomitrella patens	45.53	6.00e-61	225.00
IUUC-Pfo-096388	Poecilia formosa	43.92	1.00e-76	278.00
IUUC-Pab-097533	Pongo abelii	42.48	2.00e-73	267.00
IUUC-Pop-099348	Populus trichocarpa	44.41	7.00e-74	269.00
IUUC-Ppe-101817	Prunus persica	44.01	1.00e-80	291.00
IUUC-Pva-102233	Pteropus vampyrus	43.07	1.00e-74	271.00
IUUC-Pgr-103342	Puccinia graminis	51.28	5.00e-101	359.00
IUUC-Ptt-103836	Puccinia triticina	50.13	3.00e-103	366.00
IUUC-Pte-104387	Pyrenophora teres	62.13	3.00e-127	446.00
IUUC-Pyt-104737	Pyrenophora triticirepentis	61.64	6.00e-130	455.00
IUUC-Rno-105548	Rattus norvegicus	42.18	7.00e-73	265.00
IUUC-Sce-106379	Saccharomyces cerevisiae	48.57	6.00e-99	352.00
IUUC-Sha-106976	Sarcophilus harrisii	37.43	7.00e-59	219.00
IUUC-Sja-107668	Schizosaccharomyces japonicus	56.57	1.00e-113	401.00
IUUC-Spo-108293	Schizosaccharomyces pombe	59.60	1.00e-125	441.00
IUUC-Smo-109611	Selaginella moellendorffii	45.59	3.00e-84	303.00
IUUC-Sit-110436	Setaria italica	42.43	2.00e-78	284.00
IUUC-Sly-111037	Solanum lycopersicum	41.13	5.00e-78	282.00
IUUC-Sar-113159	Sorex araneus	28.45	7.00e-23	99.00
IUUC-Sbi-113852	Sorghum bicolor	43.03	3.00e-76	276.00
IUUC-Sre-114922	Sporisorium reilianum	37.79	8.00e-60	222.00
IUUC-Ssc-116305	Sus scrofa	42.48	3.00e-73	267.00
IUUC-Tgu-116751	Taeniopygia guttata	43.95	9.00e-77	278.00
IUUC-Tru-117798	Takifugu rubripes	43.92	4.00e-77	279.00
IUUC-Tsy-119523	Tarsius syrichta	44.24	2.00e-63	234.00
IUUC-Tni-120477	Tetraodon nigroviridis	44.25	4.00e-77	280.00
IUUC-Tca-121802	Theobroma cacao	42.99	3.00e-77	280.00
IUUC-Tre-121994	Trichoderma reesei	71.31	7.00e-152	528.00
IUUC-Tvi-122631	Trichoderma virens	72.09	4.00e-150	522.00
IUUC-Tae-125687	Triticum aestivum	40.29	2.00e-77	281.00
IUUC-Tur-126390	Triticum urartu	41.02	6.00e-76	275.00
IUUC-Tme-127152	Tuber melanosporum	61.43	4.00e-129	452.00
IUUC-Tbe-127319	Tupaia belangeri	33.87	1.00e-33	135.00
IUUC-Ttr-129207	Tursiops truncatus	41.89	6.00e-72	262.00
IUUC-Uma-129342	Ustilago maydis	36.69	3.00e-53	200.00
IUUC-Vda-129865	Verticillium dahliae	72.07	2.00e-163	566.00
IUUC-Vpa-130076	Vicugna pacos	37.46	1.00e-52	198.00
IUUC-Vvi-131104	Vitis vinifera	43.62	3.00e-79	286.00
IUUC-Xtr-132917	Xenopus tropicalis	34.99	1.00e-47	181.00
IUUC-Xma-133615	Xiphophorus maculatus	43.92	2.00e-76	277.00
IUUC-Yli-134431	Yarrowia lipolytica	51.12	8.00e-105	372.00
IUUC-Zma-135142	Zea mays	41.69	2.00e-76	277.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence