iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107681

Ensembl Protein ID

EEB09341

UniProt Accession

B6K737; B6K737_SCHJY

Genbank Protein ID

EEB09341.1

Protein Name

ERCC-8 DNA repair

Genbank Nucleotide ID

KE651168

Gene Name

SJAG_04540

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_04540	EEB09341	EEB09341

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-36	121.1	185	219

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           gHt++v ++++    +  l+sG+ Dgt+++WD+r+
   Q: 185  GHTGRVLAVSWcpaREYVLASGGTDGTCRLWDVRK 219
           8***********7655779*************986 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MESFLLVRQW YTDYQKPFRL QVYQRLMQTL RLSNPNCIRR RHGPGAMSAV TSLSIDNTEH 60
NFMISGAADS SINLWNLLSL NSMAEEPLDT LNTIPARHGH THGITDLHWF PFDNGMFTSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAATCCT TTTTGCTGGT TCGACAGTGG TATACTGATT ATCAAAAACC TTTTCGGTTA 60
CAGGTATATC AGCGGCTAAT GCAGACATTA CGCCTCTCCA ATCCCAATTG CATTCGACGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0070912--C:Ddb1-Ckn1 complex
GO:0006283--P:transcription-coupled nucleotide-excision repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001170	Aegilops tauschii	25.08	2.00e-16	79.00
IUUC-Aml-002201	Ailuropoda melanoleuca	34.66	1.00e-62	231.00
IUUC-Atr-002784	Amborella trichopoda	35.27	5.00e-32	129.00
IUUC-Apl-003202	Anas platyrhynchos	34.77	2.00e-59	221.00
IUUC-Aca-004708	Anolis carolinensis	36.42	5.00e-59	219.00
IUUC-Aly-006144	Arabidopsis lyrata	27.25	5.00e-41	159.00
IUUC-Ath-006673	Arabidopsis thaliana	26.92	3.00e-41	160.00
IUUC-Acl-008195	Aspergillus clavatus	30.42	1.00e-37	148.00
IUUC-Afl-008406	Aspergillus flavus	29.70	2.00e-39	154.00
IUUC-Afu-008759	Aspergillus fumigatus	30.95	5.00e-41	159.00
IUUC-Ani-009380	Aspergillus nidulans	30.51	9.00e-39	152.00
IUUC-Ang-009820	Aspergillus niger	32.34	6.00e-36	142.00
IUUC-Aor-010092	Aspergillus oryzae	28.27	7.00e-42	162.00
IUUC-Ate-010491	Aspergillus terreus	34.65	2.00e-43	167.00
IUUC-Bta-012825	Bos taurus	33.69	2.00e-60	224.00
IUUC-Bci-013856	Botrytis cinerea	36.93	7.00e-63	232.00
IUUC-Bdi-014899	Brachypodium distachyon	37.10	2.00e-32	131.00
IUUC-Bol-015337	Brassica oleracea	26.68	3.00e-39	154.00
IUUC-Bra-018089	Brassica rapa	26.42	5.00e-34	136.00
IUUC-Cja-018725	Callithrix jacchus	33.07	4.00e-61	226.00
IUUC-Cfa-021162	Canis familiaris	34.04	1.00e-62	231.00
IUUC-Cpo-022190	Cavia porcellus	33.07	1.00e-60	224.00
IUUC-Cre-022960	Chlamydomonas reinhardtii	35.56	1.00e-29	122.00
IUUC-Csa-023610	Chlorocebus sabaeus	33.60	3.00e-62	229.00
IUUC-Cho-024689	Choloepus hoffmanni	32.87	5.00e-58	216.00
IUUC-Cin-025324	Ciona intestinalis	30.82	1.00e-45	174.00
IUUC-Csv-026059	Ciona savignyi	29.48	6.00e-39	152.00
IUUC-Cgl-026384	Colletotrichum gloeosporioides	37.26	2.00e-40	158.00
IUUC-Cme-027182	Cyanidioschyzon merolae	31.71	6.00e-17	80.50
IUUC-Dre-028696	Danio rerio	33.51	5.00e-59	219.00
IUUC-Dno-029102	Dasypus novemcinctus	34.05	3.00e-60	223.00
IUUC-Dor-030361	Dipodomys ordii	31.99	2.00e-44	170.00
IUUC-Dse-031167	Dothistroma septosporum	32.59	8.00e-50	189.00
IUUC-Ete-032856	Echinops telfairi	26.86	4.00e-38	150.00
IUUC-Eca-033611	Equus caballus	34.53	1.00e-57	214.00
IUUC-Eeu-034583	Erinaceus europaeus	29.29	3.00e-22	97.40
IUUC-Fca-036481	Felis catus	35.26	4.00e-63	233.00
IUUC-Fal-037327	Ficedula albicollis	38.14	3.00e-59	219.00
IUUC-Fox-037684	Fusarium oxysporum	30.81	2.00e-47	181.00
IUUC-Fso-038306	Fusarium solani	32.54	8.00e-55	205.00
IUUC-Gmo-039043	Gadus morhua	33.60	8.00e-57	212.00
IUUC-Ggr-039783	Gaeumannomyces graminis	30.00	3.00e-45	174.00
IUUC-Gga-041085	Gallus gallus	35.56	9.00e-60	221.00
IUUC-Gac-042328	Gasterosteus aculeatus	31.77	1.00e-50	191.00
IUUC-Gma-043004	Glycine max	27.22	7.00e-34	136.00
IUUC-Ggo-045627	Gorilla gorilla	31.04	4.00e-51	193.00
IUUC-Hsa-046028	Homo sapiens	33.60	3.00e-62	229.00
IUUC-Hvu-047678	Hordeum vulgare	44.44	2.00e-17	81.30
IUUC-Itr-048648	Ictidomys tridecemlineatus	34.39	1.00e-62	231.00
IUUC-Kpa-049386	Komagataella pastoris	30.53	2.00e-53	201.00
IUUC-Lch-050590	Latimeria chalumnae	35.56	5.00e-53	199.00
IUUC-Lpe-051725	Leersia perrieri	30.65	1.00e-17	82.00
IUUC-Loc-051788	Lepisosteus oculatus	35.83	5.00e-61	226.00
IUUC-Lma-053082	Leptosphaeria maculans	34.66	1.00e-60	224.00
IUUC-Laf-053809	Loxodonta africana	33.42	3.00e-62	230.00
IUUC-Mcc-054998	Macaca mulatta	37.98	2.00e-54	203.00
IUUC-Meu-055929	Macropus eugenii	34.39	1.00e-54	204.00
IUUC-Mor-057003	Magnaporthe oryzae	35.69	8.00e-49	186.00
IUUC-Mtr-057921	Medicago truncatula	27.25	9.00e-34	135.00
IUUC-Mga-059449	Meleagris gallopavo	42.17	6.00e-35	139.00
IUUC-Mmr-061609	Microcebus murinus	32.10	3.00e-52	196.00
IUUC-Mdo-062564	Monodelphis domestica	33.00	2.00e-62	230.00
IUUC-Mmu-063904	Mus musculus	33.92	4.00e-62	229.00
IUUC-Mac-064716	Musa acuminata	36.02	6.00e-32	129.00
IUUC-Mpu-066617	Mustela putorius furo	34.66	2.00e-62	231.00
IUUC-Mlu-067054	Myotis lucifugus	32.83	4.00e-60	223.00
IUUC-Nfi-068467	Neosartorya fischeri	29.47	6.00e-36	142.00
IUUC-Nle-069731	Nomascus leucogenys	33.60	3.00e-62	229.00
IUUC-Ont-072558	Oreochromis niloticus	34.17	1.00e-52	197.00
IUUC-Ocu-074415	Oryctolagus cuniculus	33.08	2.00e-61	227.00
IUUC-Oba-075759	Oryza barthii	36.02	1.00e-31	129.00
IUUC-Obr-076387	Oryza brachyantha	33.61	3.00e-33	134.00
IUUC-Ogu-078186	Oryza glumaepatula	27.34	2.00e-36	144.00
IUUC-Oin-079389	Oryza indica	27.07	6.00e-20	89.70
IUUC-Ome-081471	Oryza meridionalis	34.25	9.00e-30	122.00
IUUC-Oni-082449	Oryza nivara	33.70	2.00e-29	121.00
IUUC-Opu-083210	Oryza punctata	27.18	2.00e-35	140.00
IUUC-Oru-085159	Oryza rufipogon	36.02	1.00e-31	129.00
IUUC-Osa-085926	Oryza sativa	35.62	1.00e-22	97.40
IUUC-Ola-087084	Oryzias latipes	34.04	8.00e-60	222.00
IUUC-Olu-087853	Ostreococcus lucimarinus	23.95	7.00e-25	105.00
IUUC-Oga-089008	Otolemur garnettii	31.25	1.00e-57	214.00
IUUC-Oar-089259	Ovis aries	33.69	6.00e-61	225.00
IUUC-Ptr-091112	Pan troglodytes	33.24	5.00e-61	226.00
IUUC-Psi-093050	Pelodiscus sinensis	32.84	8.00e-59	218.00
IUUC-Pma-094259	Petromyzon marinus	32.48	6.00e-47	179.00
IUUC-Pno-094798	Phaeosphaeria nodorum	32.03	2.00e-60	224.00
IUUC-Ppa-095477	Physcomitrella patens	26.56	2.00e-39	154.00
IUUC-Pfo-096855	Poecilia formosa	33.41	1.00e-58	218.00
IUUC-Pab-098096	Pongo abelii	33.60	3.00e-62	229.00
IUUC-Pop-098800	Populus trichocarpa	29.14	8.00e-43	166.00
IUUC-Pca-100187	Procavia capensis	36.32	2.00e-33	134.00
IUUC-Ppe-101759	Prunus persica	35.78	5.00e-34	136.00
IUUC-Pva-102438	Pteropus vampyrus	40.82	1.00e-30	125.00
IUUC-Pte-104197	Pyrenophora teres	36.67	1.00e-58	218.00
IUUC-Pyt-104421	Pyrenophora triticirepentis	33.25	3.00e-54	203.00
IUUC-Rno-106087	Rattus norvegicus	34.19	3.00e-62	230.00
IUUC-Sce-106276	Saccharomyces cerevisiae	25.91	2.00e-15	74.70
IUUC-Sha-106831	Sarcophilus harrisii	31.12	2.00e-54	204.00
IUUC-Spo-108294	Schizosaccharomyces pombe	58.37	4.00e-141	492.00
IUUC-Ssl-108613	Sclerotinia sclerotiorum	36.65	8.00e-60	222.00
IUUC-Smo-109008	Selaginella moellendorffii	30.10	5.00e-45	172.00
IUUC-Sit-110300	Setaria italica	36.02	5.00e-32	129.00
IUUC-Sly-111441	Solanum lycopersicum	42.42	1.00e-29	122.00
IUUC-Stu-111995	Solanum tuberosum	42.42	8.00e-30	122.00
IUUC-Sar-113196	Sorex araneus	30.64	7.00e-33	132.00
IUUC-Sbi-113790	Sorghum bicolor	35.48	2.00e-32	130.00
IUUC-Ssc-115609	Sus scrofa	33.17	1.00e-62	231.00
IUUC-Tgu-116927	Taeniopygia guttata	35.22	2.00e-62	230.00
IUUC-Tru-118164	Takifugu rubripes	32.77	5.00e-61	226.00
IUUC-Tsy-119151	Tarsius syrichta	31.22	2.00e-52	197.00
IUUC-Tni-120896	Tetraodon nigroviridis	34.04	1.00e-53	201.00
IUUC-Tca-121592	Theobroma cacao	33.94	8.00e-33	132.00
IUUC-Tre-122023	Trichoderma reesei	38.23	2.00e-57	214.00
IUUC-Tvi-122507	Trichoderma virens	33.56	2.00e-58	218.00
IUUC-Tae-125276	Triticum aestivum	37.23	7.00e-34	135.00
IUUC-Tur-126092	Triticum urartu	34.62	8.00e-16	76.30
IUUC-Tbe-127422	Tupaia belangeri	24.00	8.00e-24	102.00
IUUC-Ttr-129097	Tursiops truncatus	33.78	3.00e-62	230.00
IUUC-Vda-130014	Verticillium dahliae	32.94	7.00e-50	189.00
IUUC-Vpa-130782	Vicugna pacos	34.39	7.00e-63	232.00
IUUC-Vvi-131494	Vitis vinifera	35.41	1.00e-32	132.00
IUUC-Xtr-132165	Xenopus tropicalis	34.31	2.00e-61	227.00
IUUC-Xma-133205	Xiphophorus maculatus	33.98	5.00e-62	229.00
IUUC-Yli-134614	Yarrowia lipolytica	34.57	3.00e-62	230.00
IUUC-Zma-135861	Zea mays	28.75	5.00e-36	143.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence