iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-006927

UUCD1 version

UUC-ArT-01264

Ensembl Protein ID

AT3G03740.1

UniProt Accession

Q9SRV1; Q8LGI9; BPM4_ARATH

Genbank Protein ID

AAF00643.1; AEE73980.1; AAK32896.1; AAL15375.1; AAM60841.1

Protein Name

BTB/POZ and MATH domain-containing protein 4; Protein BTB-POZ AND MATH DOMAIN 4

Genbank Nucleotide ID

AC009540; CP002686; AF367309; AY059150; AY084246

Gene Name

BPM4; At3g03740; F20H23.23

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G03740	AT3G03740.1	AT3G03740.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	Mentha
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/BCR/BTB_3-box	BTB_3-box	23792371

Classification

Family	E-value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_3-box: BTB	8.20e-17	62.2	216	280

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_3-box: BTB

   S: 1    aDvilvvggeeffahkivLaasSsvFyalflmeleesksklmveikdvqpevfrallkFlYtgklde 67
           +D++++v ge+f+ah++vLaa+S+vF++ fl    e +    +e+ d++p+vf+all+++Y + l e
   Q: 216  SDITFNVSGEKFRAHRLVLAARSPVFESEFLDVTGEED--RDIEVTDMEPKVFKALLHYIYKDALIE 280
           69****************************99999886..78********************99987 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Protein Sequence
(Fasta)

MKSVIFTEEK NLQRQNPLQK SEQQRRNFEM PSPPTTTSLS VTQTINGSHS FTIKGYSLAK 60
GIGIGKHIAS DTFTVGGYQW AIYFYPDGKN PEDNSAYVSV FIALASDGTD VRALFELSLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTCCTTCTC CAAATCAGTA GAGCCGCTAT TAATAAGAAA GTGTAACTTC CGAATGACAA 60
TGACGGTGCT TGGTTGTGTT TGCTACAAAC ATAGAACTCG AATTTTTCAA ATAATAAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR034090--BPM_C
IPR000210--BTB/POZ_dom
IPR002083--MATH/TRAF_dom
IPR011333--SKP1/BTB/POZ
IPR008974--TRAF-like

PROSITE

PS50097--BTB
PS50144--MATH

Pfam

PF00651--BTB

SMART

SM00225--BTB
SM00061--MATH

Gene Ontology

GO:0005829--C:cytosol
GO:0071472--P:cellular response to salt stress
GO:0042631--P:cellular response to water deprivation
GO:0016567--P:protein ubiquitination
GO:0006970--P:response to osmotic stress

KEGG

ath:AT3G03740

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000938	Aegilops tauschii	69.73	2.00e-145	508.00
IUUC-Atr-002762	Amborella trichopoda	69.58	2.00e-154	537.00
IUUC-Aly-005426	Arabidopsis lyrata	98.57	0.00e+00	780.00
IUUC-Bdi-014482	Brachypodium distachyon	70.28	7.00e-156	542.00
IUUC-Bol-015794	Brassica oleracea	93.15	0.00e+00	721.00
IUUC-Bra-016843	Brassica rapa	93.10	0.00e+00	711.00
IUUC-Csa-023569	Chlorocebus sabaeus	30.10	9.00e-29	119.00
IUUC-Fox-037845	Fusarium oxysporum	25.58	1.00e-11	62.40
IUUC-Gma-043988	Glycine max	76.57	2.00e-176	610.00
IUUC-Lpe-050894	Leersia perrieri	71.21	3.00e-158	550.00
IUUC-Mpo-057374	Magnaporthe poae	38.81	1.00e-04	40.80
IUUC-Mtr-058558	Medicago truncatula	75.06	3.00e-170	590.00
IUUC-Mac-065306	Musa acuminata	72.80	4.00e-164	570.00
IUUC-Oba-075622	Oryza barthii	70.90	2.00e-152	531.00
IUUC-Obr-076031	Oryza brachyantha	70.47	6.00e-153	533.00
IUUC-Ogl-077417	Oryza glaberrima	71.21	5.00e-164	570.00
IUUC-Ogu-077972	Oryza glumaepatula	71.21	8.00e-164	569.00
IUUC-Oin-079803	Oryza indica	70.65	8.00e-152	529.00
IUUC-Olo-080354	Oryza longistaminata	67.66	6.00e-156	543.00
IUUC-Ome-081945	Oryza meridionalis	70.65	8.00e-150	522.00
IUUC-Oni-082465	Oryza nivara	71.21	8.00e-164	569.00
IUUC-Opu-083442	Oryza punctata	71.72	2.00e-160	557.00
IUUC-Oru-084278	Oryza rufipogon	70.65	8.00e-152	529.00
IUUC-Osa-086302	Oryza sativa	71.21	8.00e-164	569.00
IUUC-Pop-099477	Populus trichocarpa	78.95	6.00e-150	522.00
IUUC-Ppe-101628	Prunus persica	73.59	2.00e-170	590.00
IUUC-Pyt-104809	Pyrenophora triticirepentis	37.50	2.00e-03	35.80
IUUC-Smo-108684	Selaginella moellendorffii	67.83	6.00e-130	456.00
IUUC-Sit-110359	Setaria italica	69.70	9.00e-159	552.00
IUUC-Sly-111510	Solanum lycopersicum	69.31	1.00e-158	551.00
IUUC-Stu-112173	Solanum tuberosum	69.57	4.00e-159	553.00
IUUC-Sbi-114413	Sorghum bicolor	68.97	5.00e-158	550.00
IUUC-Tca-121578	Theobroma cacao	76.57	0.00e+00	629.00
IUUC-Tae-123893	Triticum aestivum	70.08	7.00e-160	556.00
IUUC-Tur-126571	Triticum urartu	69.57	7.00e-160	555.00
IUUC-Vpa-130728	Vicugna pacos	31.01	6.00e-40	157.00
IUUC-Vvi-131434	Vitis vinifera	75.43	6.00e-180	622.00
IUUC-Xma-133544	Xiphophorus maculatus	33.33	4.00e-36	144.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence