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Tag Content
UUCD2 ID IUUC-Xtr-132232
UUCD1 version UUC-XeT-00530
Ensembl Protein ID ENSXETP00000017293.3
UniProt Accession F6ZH12; F6ZH12_XENTR
Genbank Protein ID ENSXETP00000017293
Protein Name SNF2 histone linker PHD RING helicase, E3 ubiquitin protein ligase
Genbank Nucleotide ID AAMC01001283
Gene Name shprh
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSXETG00000025060.2 ENSXETT00000017293.3 ENSXETP00000017293.3
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 63.54 0.00e+00 2082.00 IUUC-Hsa-046172
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Xenopus tropicalis
Protein Sequence
(Fasta)
MSSRRKRAPP IRLSDEEKKL HCWNMHEDRR LEDFTLEEEN PGTSTSFSFH DVKHAKLEQK 60
QITESLSEPL NLPLQNDTDI TPTLVPLSVH LSMLISPVPT EENWKALLGV FSLHLSSGQS 120
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Protein Fasta Sequence


>IUUC-Xtr-132232|E3,RING|Xenopus tropicalis
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Nucleotide Sequence
(Fasta)
ATGAGTAGCC GTAGGAAGCG TGCCCCTCCG ATCAGGCTCA GCGATGAGGA AAAGAAACTT 60
CACTGCTGGA ATATGCATGA AGATAGGAGA TTAGAAGACT TTACACTGGA AGAGGAAAAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Xtr-132232|E3,RING|Xenopus tropicalis
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR005818--Histone_H1/H5_H15
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR011991--WHTH_DNA-bd_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS51504--H15
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF00271--Helicase_C
PF00538--Linker_histone
PF00176--SNF2_N
SMART

SM00487--DEXDc
SM00526--H15
SM00249--PHD
SM00184--RING
Gene Ontology

GO:0000786--C:nucleosome
GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0006334--P:nucleosome assembly
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Atr-002896 Amborella trichopoda 38.88 9.00e-78 286.00
IUUC-Apl-003428 Anas platyrhynchos 68.44 0.00e+00 2279.00
IUUC-Aca-004510 Anolis carolinensis 64.72 0.00e+00 2029.00
IUUC-Aly-005691 Arabidopsis lyrata 31.05 3.00e-126 446.00
IUUC-Ath-007139 Arabidopsis thaliana 30.97 3.00e-125 443.00
IUUC-Acl-008380 Aspergillus clavatus 31.90 3.00e-24 107.00
IUUC-Afu-008890 Aspergillus fumigatus 32.98 2.00e-34 142.00
IUUC-Ani-009351 Aspergillus nidulans 31.16 1.00e-30 129.00
IUUC-Ang-009583 Aspergillus niger 31.01 1.00e-29 125.00
IUUC-Aor-009893 Aspergillus oryzae 32.76 1.00e-29 125.00
IUUC-Ate-010385 Aspergillus terreus 33.44 5.00e-36 146.00
IUUC-Ame-011882 Astyanax mexicanus 74.26 0.00e+00 1601.00
IUUC-Bgr-012295 Blumeria graminis 29.94 6.00e-33 136.00
IUUC-Bta-012528 Bos taurus 63.30 0.00e+00 2093.00
IUUC-Bci-013701 Botrytis cinerea 30.82 1.00e-31 132.00
IUUC-Bdi-014034 Brachypodium distachyon 35.22 1.00e-65 245.00
IUUC-Bol-015555 Brassica oleracea 32.60 1.00e-117 418.00
IUUC-Bra-016916 Brassica rapa 31.95 2.00e-128 454.00
IUUC-Cja-019391 Callithrix jacchus 63.80 0.00e+00 2083.00
IUUC-Cfa-020732 Canis familiaris 63.91 0.00e+00 2110.00
IUUC-Cpo-021641 Cavia porcellus 61.82 0.00e+00 2014.00
IUUC-Csa-023937 Chlorocebus sabaeus 63.56 0.00e+00 2104.00
IUUC-Cho-024617 Choloepus hoffmanni 60.71 4.00e-85 310.00
IUUC-Cgl-026624 Colletotrichum gloeosporioides 32.72 1.00e-34 142.00
IUUC-Cme-027178 Cyanidioschyzon merolae 32.32 3.00e-114 406.00
IUUC-Dre-028441 Danio rerio 61.68 0.00e+00 2003.00
IUUC-Dno-029395 Dasypus novemcinctus 74.35 0.00e+00 1570.00
IUUC-Dse-031372 Dothistroma septosporum 29.69 2.00e-33 138.00
IUUC-Dme-031785 Drosophila melanogaster 28.09 2.00e-96 347.00
IUUC-Ete-032502 Echinops telfairi 70.58 0.00e+00 1152.00
IUUC-Eca-033455 Equus caballus 60.49 0.00e+00 1952.00
IUUC-Eeu-034956 Erinaceus europaeus 69.17 0.00e+00 1498.00
IUUC-Fca-035984 Felis catus 61.47 0.00e+00 1660.00
IUUC-Fal-036811 Ficedula albicollis 68.51 0.00e+00 2257.00
IUUC-Fox-038048 Fusarium oxysporum 43.67 7.00e-31 129.00
IUUC-Fso-038224 Fusarium solani 31.56 1.00e-31 132.00
IUUC-Gmo-039126 Gadus morhua 71.77 0.00e+00 1552.00
IUUC-Ggr-040102 Gaeumannomyces graminis 29.29 2.00e-24 108.00
IUUC-Gga-041238 Gallus gallus 68.75 0.00e+00 2283.00
IUUC-Gac-041614 Gasterosteus aculeatus 61.26 0.00e+00 1984.00
IUUC-Gma-043259 Glycine max 37.97 6.00e-66 246.00
IUUC-Ggo-045213 Gorilla gorilla 61.27 0.00e+00 1997.00
IUUC-Hsa-046172 Homo sapiens 63.55 0.00e+00 2093.00
IUUC-Hvu-047286 Hordeum vulgare 40.56 5.00e-31 129.00
IUUC-Itr-048880 Ictidomys tridecemlineatus 62.82 0.00e+00 2053.00
IUUC-Lch-050648 Latimeria chalumnae 62.70 0.00e+00 1867.00
IUUC-Lpe-050871 Leersia perrieri 35.90 3.00e-67 251.00
IUUC-Loc-051862 Lepisosteus oculatus 61.84 0.00e+00 2046.00
IUUC-Lma-053266 Leptosphaeria maculans 28.96 2.00e-23 104.00
IUUC-Laf-053851 Loxodonta africana 63.25 0.00e+00 2039.00
IUUC-Mcc-055066 Macaca mulatta 63.60 0.00e+00 2105.00
IUUC-Meu-056104 Macropus eugenii 73.27 0.00e+00 646.00
IUUC-Mor-057226 Magnaporthe oryzae 27.51 2.00e-27 118.00
IUUC-Mpo-057528 Magnaporthe poae 27.59 1.00e-24 109.00
IUUC-Mtr-058336 Medicago truncatula 35.70 6.00e-68 253.00
IUUC-Mga-059775 Meleagris gallopavo 68.88 0.00e+00 2267.00
IUUC-Mdo-062943 Monodelphis domestica 68.36 0.00e+00 2251.00
IUUC-Mmu-064115 Mus musculus 62.31 0.00e+00 2071.00
IUUC-Mac-064445 Musa acuminata 37.47 3.00e-72 266.00
IUUC-Mpu-066850 Mustela putorius furo 63.55 0.00e+00 2107.00
IUUC-Mlu-067610 Myotis lucifugus 62.79 0.00e+00 2074.00
IUUC-Nfi-068264 Neosartorya fischeri 33.10 1.00e-33 139.00
IUUC-Ncr-068745 Neurospora crassa 36.36 3.00e-30 127.00
IUUC-Nle-070055 Nomascus leucogenys 63.37 0.00e+00 2080.00
IUUC-Ont-071526 Oreochromis niloticus 61.71 0.00e+00 2003.00
IUUC-Oan-073609 Ornithorhynchus anatinus 81.84 0.00e+00 1310.00
IUUC-Ocu-074042 Oryctolagus cuniculus 62.81 0.00e+00 2050.00
IUUC-Oba-075121 Oryza barthii 35.85 3.00e-65 244.00
IUUC-Obr-076312 Oryza brachyantha 35.16 4.00e-67 250.00
IUUC-Ogl-077560 Oryza glaberrima 35.85 2.00e-65 244.00
IUUC-Ogu-078746 Oryza glumaepatula 35.85 3.00e-66 247.00
IUUC-Oin-080153 Oryza indica 27.08 1.00e-93 338.00
IUUC-Olo-080436 Oryza longistaminata 28.34 4.00e-111 396.00
IUUC-Oni-082845 Oryza nivara 35.85 1.00e-65 245.00
IUUC-Opu-083321 Oryza punctata 28.70 1.00e-112 402.00
IUUC-Oru-084329 Oryza rufipogon 35.85 9.00e-66 246.00
IUUC-Olu-087671 Ostreococcus lucimarinus 29.43 2.00e-114 407.00
IUUC-Oar-090005 Ovis aries 63.47 0.00e+00 2100.00
IUUC-Pan-092723 Papio anubis 62.40 0.00e+00 2024.00
IUUC-Psi-093870 Pelodiscus sinensis 68.69 0.00e+00 2274.00
IUUC-Pma-094750 Petromyzon marinus 58.82 1.00e-77 281.00
IUUC-Pno-095005 Phaeosphaeria nodorum 41.51 1.00e-29 125.00
IUUC-Ppa-095619 Physcomitrella patens 29.60 3.00e-69 256.00
IUUC-Pfo-096833 Poecilia formosa 62.05 0.00e+00 2009.00
IUUC-Pab-098544 Pongo abelii 63.59 0.00e+00 2091.00
IUUC-Pop-099540 Populus trichocarpa 38.91 2.00e-80 294.00
IUUC-Ppe-102038 Prunus persica 36.42 6.00e-79 289.00
IUUC-Pte-104081 Pyrenophora teres 29.15 1.00e-27 119.00
IUUC-Pyt-104477 Pyrenophora triticirepentis 30.09 3.00e-30 128.00
IUUC-Rno-104959 Rattus norvegicus 62.52 0.00e+00 2056.00
IUUC-Sha-107078 Sarcophilus harrisii 67.90 0.00e+00 2253.00
IUUC-Sja-107755 Schizosaccharomyces japonicus 30.34 2.00e-35 144.00
IUUC-Spo-108132 Schizosaccharomyces pombe 31.25 3.00e-36 147.00
IUUC-Ssl-108615 Sclerotinia sclerotiorum 27.51 2.00e-27 118.00
IUUC-Smo-108991 Selaginella moellendorffii 33.24 4.00e-142 499.00
IUUC-Sit-110047 Setaria italica 27.49 4.00e-29 124.00
IUUC-Sly-111232 Solanum lycopersicum 28.34 3.00e-75 276.00
IUUC-Sar-113738 Sorex araneus 60.51 0.00e+00 2004.00
IUUC-Sbi-114485 Sorghum bicolor 34.12 4.00e-32 134.00
IUUC-Ssc-116362 Sus scrofa 63.63 0.00e+00 2083.00
IUUC-Tgu-117188 Taeniopygia guttata 68.10 0.00e+00 2242.00
IUUC-Tru-117637 Takifugu rubripes 61.46 0.00e+00 1982.00
IUUC-Tni-119701 Tetraodon nigroviridis 61.47 0.00e+00 2013.00
IUUC-Tca-121831 Theobroma cacao 38.51 8.00e-80 292.00
IUUC-Tre-122005 Trichoderma reesei 27.43 3.00e-23 104.00
IUUC-Tvi-122328 Trichoderma virens 28.61 1.00e-22 102.00
IUUC-Tae-123569 Triticum aestivum 27.46 4.00e-106 380.00
IUUC-Tur-125964 Triticum urartu 26.43 2.00e-102 367.00
IUUC-Tbe-127799 Tupaia belangeri 50.83 0.00e+00 1035.00
IUUC-Vvi-131682 Vitis vinifera 41.20 7.00e-81 296.00
IUUC-Xma-133291 Xiphophorus maculatus 62.02 0.00e+00 1991.00
IUUC-Zma-135327 Zea mays 34.41 2.00e-63 237.00
Created Date 25-Jun-2017

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