iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058094

Ensembl Protein ID

AES65027

UniProt Accession

G7IG05; A0A0C3V0Y8; G7IG05_MEDTR

Genbank Protein ID

AES65027.2

Protein Name

WD40/YVTN repeat containing domain-containing protein

Genbank Nucleotide ID

CM001218

Gene Name

MTR_2g034500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_2g034500	AES65027	AES65027

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.40e-27	93.5	323	357
UBD/Beta-Prp	8.70e-43	148.0	238	494

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd..tllvsGsdDgtikvWDl 30
           gHt+ vt++af   ++    l+s+sdDgt+++WD 
   Q: 323  GHTGAVTAIAFsprPNavYQLLSSSDDGTCRIWDA 357
           8***********99777677**************5 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.. 104
           +gh  + ++c  f +++++++tgs+d+ +k+w+++t   l+s  gh + +t++  s++  + +++s+D++i+vw l +g ++++l+gh+  v++++fsp  
   Q: 238  RGHCNA-VYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPrp 337
           555554.555999**********************************************9***************************************99 PP
   S: 105  sg.dklvsGshdrtirvwdletgqclee..................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.........ktgkllrtltg 177
           +  + l+s s+d t r+wd +                            ++++ + c +++ +g ++v+Gs D+  r+W+          + +  ++ l+g
   Q: 338  NAvYQLLSSSDDGTCRIWDARYTHSTPRlyvpkpsdstgrssgpssNTMPQSHQIFCCAFNANGTVFVTGSSDNLARVWNAcklsmedveQPNHEIDVLSG 438
           777*****************999999999****************97777888899999*********************999988888555556666677 PP
   S: 178  ghtdsvyslsfdsng..........................kelvsgsldgtvklwd 208
            h+++v+ ++f+                               +v++s+dg+ ++w 
   Q: 439  -HENDVNYVQFSGCTvasrfsttetwkednipkfknswlnhDNIVTCSRDGSAIIWI 494
           .*********6666666667777788888899999999*99***************5 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MALQKYVPSG DAPTVSLKHL SSSKAPEKTQ PDVANQNHDM DVDVDIGEVY FLIMRFLSAG 60
PCHKTCSHLW NELLENQLLP RRYHAWYSRS GASSGVPHDD GQSFPLEDYN KLAERYPHIE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTTGC AGAAGTATGT TCCATCCGGC GATGCACCTA CTGTTAGTTT GAAACATTTG 60
AGTTCCAGTA AGGCCCCTGA GAAAACTCAG CCTGATGTAG CAAATCAAAA TCATGACATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001487--Bromodomain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00439--Bromodomain
PF00400--WD40

SMART

SM00320--WD40

KEGG

mtr:MTR_2g034500

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001113	Aegilops tauschii	57.49	0.00e+00	876.00
IUUC-Aml-001881	Ailuropoda melanoleuca	30.61	8.00e-75	275.00
IUUC-Atr-002600	Amborella trichopoda	63.54	0.00e+00	1148.00
IUUC-Apl-003700	Anas platyrhynchos	32.44	1.00e-67	251.00
IUUC-Aca-004474	Anolis carolinensis	33.53	1.00e-81	298.00
IUUC-Aly-006406	Arabidopsis lyrata	56.21	0.00e+00	1516.00
IUUC-Ath-006801	Arabidopsis thaliana	55.97	0.00e+00	1533.00
IUUC-Ame-010718	Astyanax mexicanus	30.66	7.00e-76	279.00
IUUC-Bta-013217	Bos taurus	30.77	9.00e-76	279.00
IUUC-Bdi-014797	Brachypodium distachyon	69.31	0.00e+00	799.00
IUUC-Bol-015737	Brassica oleracea	55.64	0.00e+00	1540.00
IUUC-Bra-017961	Brassica rapa	55.82	0.00e+00	1552.00
IUUC-Cja-018868	Callithrix jacchus	33.28	4.00e-82	300.00
IUUC-Cfa-021037	Canis familiaris	30.91	4.00e-76	280.00
IUUC-Cpo-021934	Cavia porcellus	30.33	1.00e-75	279.00
IUUC-Csa-023618	Chlorocebus sabaeus	33.28	3.00e-82	300.00
IUUC-Cho-024690	Choloepus hoffmanni	27.41	3.00e-36	147.00
IUUC-Csv-025813	Ciona savignyi	27.54	2.00e-56	213.00
IUUC-Dre-028508	Danio rerio	31.74	3.00e-74	273.00
IUUC-Dno-030048	Dasypus novemcinctus	32.66	9.00e-76	278.00
IUUC-Dor-030195	Dipodomys ordii	35.91	6.00e-32	133.00
IUUC-Dme-031752	Drosophila melanogaster	29.77	2.00e-72	268.00
IUUC-Ete-032717	Echinops telfairi	33.75	5.00e-37	150.00
IUUC-Eca-034349	Equus caballus	30.72	6.00e-71	263.00
IUUC-Eeu-034871	Erinaceus europaeus	29.26	5.00e-41	163.00
IUUC-Fca-036099	Felis catus	30.61	5.00e-75	276.00
IUUC-Fal-037307	Ficedula albicollis	30.70	1.00e-76	282.00
IUUC-Gmo-039116	Gadus morhua	28.04	6.00e-25	110.00
IUUC-Gga-040865	Gallus gallus	30.59	1.00e-76	281.00
IUUC-Gac-042435	Gasterosteus aculeatus	30.57	1.00e-66	248.00
IUUC-Gma-043340	Glycine max	78.51	0.00e+00	2506.00
IUUC-Ggo-045500	Gorilla gorilla	30.87	2.00e-76	281.00
IUUC-Hsa-046757	Homo sapiens	33.28	4.00e-82	300.00
IUUC-Hvu-047706	Hordeum vulgare	76.84	4.00e-148	516.00
IUUC-Lch-049662	Latimeria chalumnae	31.46	5.00e-83	303.00
IUUC-Lpe-051619	Leersia perrieri	59.96	0.00e+00	1016.00
IUUC-Loc-052672	Lepisosteus oculatus	32.12	2.00e-78	287.00
IUUC-Laf-053848	Loxodonta africana	30.72	1.00e-75	278.00
IUUC-Mcc-054638	Macaca mulatta	30.77	5.00e-76	280.00
IUUC-Meu-056321	Macropus eugenii	29.87	3.00e-55	211.00
IUUC-Mga-060165	Meleagris gallopavo	30.48	2.00e-75	277.00
IUUC-Mmr-061227	Microcebus murinus	31.06	4.00e-77	283.00
IUUC-Mdo-062074	Monodelphis domestica	31.06	2.00e-78	288.00
IUUC-Mmu-063772	Mus musculus	33.14	4.00e-82	300.00
IUUC-Mac-065343	Musa acuminata	64.03	0.00e+00	1127.00
IUUC-Mpu-066628	Mustela putorius furo	30.32	2.00e-76	281.00
IUUC-Mlu-068082	Myotis lucifugus	30.47	1.00e-74	275.00
IUUC-Nle-069402	Nomascus leucogenys	30.87	1.00e-75	278.00
IUUC-Opr-070971	Ochotona princeps	27.86	2.00e-41	164.00
IUUC-Ont-072221	Oreochromis niloticus	33.04	9.00e-79	288.00
IUUC-Oan-072954	Ornithorhynchus anatinus	31.04	9.00e-80	292.00
IUUC-Ocu-074456	Oryctolagus cuniculus	31.05	1.00e-72	268.00
IUUC-Oba-075709	Oryza barthii	50.14	0.00e+00	1345.00
IUUC-Ogl-077493	Oryza glaberrima	48.27	0.00e+00	1127.00
IUUC-Ogu-078641	Oryza glumaepatula	55.98	0.00e+00	726.00
IUUC-Oin-079669	Oryza indica	70.82	0.00e+00	719.00
IUUC-Olo-080755	Oryza longistaminata	57.86	0.00e+00	744.00
IUUC-Oni-082991	Oryza nivara	47.22	0.00e+00	1073.00
IUUC-Opu-083233	Oryza punctata	58.97	0.00e+00	1020.00
IUUC-Oru-085195	Oryza rufipogon	50.06	0.00e+00	1338.00
IUUC-Ola-086648	Oryzias latipes	32.95	3.00e-81	296.00
IUUC-Olu-087745	Ostreococcus lucimarinus	34.77	7.00e-79	288.00
IUUC-Oga-089053	Otolemur garnettii	30.75	3.00e-74	274.00
IUUC-Oar-090042	Ovis aries	30.90	3.00e-75	277.00
IUUC-Ptr-091213	Pan troglodytes	30.91	2.00e-76	281.00
IUUC-Pan-092734	Papio anubis	33.28	3.00e-82	300.00
IUUC-Psi-093271	Pelodiscus sinensis	31.80	2.00e-69	258.00
IUUC-Pma-094427	Petromyzon marinus	31.61	1.00e-38	152.00
IUUC-Pfo-096191	Poecilia formosa	31.59	5.00e-78	286.00
IUUC-Pab-098402	Pongo abelii	33.28	5.00e-82	299.00
IUUC-Pop-099185	Populus trichocarpa	59.56	0.00e+00	1811.00
IUUC-Pca-101128	Procavia capensis	32.53	1.00e-68	255.00
IUUC-Ppe-101849	Prunus persica	60.26	0.00e+00	1865.00
IUUC-Pva-102512	Pteropus vampyrus	30.61	9.00e-75	275.00
IUUC-Rno-105687	Rattus norvegicus	30.33	3.00e-76	280.00
IUUC-Sha-106680	Sarcophilus harrisii	31.79	9.00e-78	285.00
IUUC-Sit-110017	Setaria italica	68.15	0.00e+00	770.00
IUUC-Sar-113004	Sorex araneus	30.19	3.00e-64	240.00
IUUC-Ssc-115461	Sus scrofa	31.34	9.00e-71	262.00
IUUC-Tgu-116513	Taeniopygia guttata	30.67	2.00e-77	285.00
IUUC-Tru-117625	Takifugu rubripes	32.32	4.00e-80	293.00
IUUC-Tsy-119003	Tarsius syrichta	32.06	6.00e-63	236.00
IUUC-Tni-120716	Tetraodon nigroviridis	32.75	3.00e-80	293.00
IUUC-Tca-121098	Theobroma cacao	59.34	0.00e+00	1813.00
IUUC-Tae-125478	Triticum aestivum	65.78	0.00e+00	1043.00
IUUC-Tur-126809	Triticum urartu	63.43	0.00e+00	1029.00
IUUC-Tbe-127479	Tupaia belangeri	35.95	3.00e-31	130.00
IUUC-Ttr-128561	Tursiops truncatus	30.62	7.00e-72	266.00
IUUC-Vpa-130160	Vicugna pacos	32.85	2.00e-73	271.00
IUUC-Vvi-131362	Vitis vinifera	62.24	0.00e+00	1873.00
IUUC-Xtr-132717	Xenopus tropicalis	32.99	1.00e-83	305.00
IUUC-Xma-134120	Xiphophorus maculatus	32.03	1.00e-78	287.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence