iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107923

Ensembl Protein ID

EEB07336

UniProt Accession

B6K2F5; B6K2F5_SCHJY

Genbank Protein ID

EEB07336.1

Protein Name

Nucleoporin Seh1

Genbank Nucleotide ID

KE651166

Gene Name

SJAG_02424

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_02424	EEB07336	EEB07336

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-22	77.1	214	249

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.....sd.tllvsGsdDgtikvWDl 30
           gHtd v+++a+      + +l+++G+ Dg ++++ l
   Q: 214  GHTDLVRDIAWapslgKNyHLVATGCKDGRLRLFKL 249
           8***********9998555889***********986 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MEQTVDTRVI NTNHQDVILD VAYDFYGQRM ATCSADQHVK IYDLDESTKE WVPVATFKAG 60
DASVLRLMWA HPEYGQAVAT CSLDRTVRIF TEQEAEADTK KWVESARLTD ARSSVMDICF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCGTTTTCC GTGATTTGAC GCACTCTACC GAGCATGTCA TCTCCGCCGC GGGGGAACAA 60
CAGAAGGAAA ACTACGTTAT AGAAAAATAA GTTTGTCATG GAGCAGACAG TTGATACTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0097042--C:extrinsic component of fungal-type vacuolar membrane
GO:0034399--C:nuclear periphery
GO:0031080--C:nuclear pore outer ring
GO:0035859--C:Seh1-associated complex
GO:1904263--P:positive regulation of TORC1 signaling

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001926	Ailuropoda melanoleuca	38.95	1.00e-62	231.00
IUUC-Apl-003654	Anas platyrhynchos	36.13	4.00e-49	186.00
IUUC-Aca-004378	Anolis carolinensis	37.42	4.00e-50	189.00
IUUC-Ago-007816	Ashbya gossypii	38.17	4.00e-77	279.00
IUUC-Acl-008248	Aspergillus clavatus	27.57	2.00e-34	137.00
IUUC-Afl-008667	Aspergillus flavus	25.75	5.00e-30	123.00
IUUC-Afu-008961	Aspergillus fumigatus	27.62	1.00e-32	131.00
IUUC-Ame-011945	Astyanax mexicanus	38.37	3.00e-62	230.00
IUUC-Bta-013306	Bos taurus	39.07	2.00e-63	234.00
IUUC-Cel-018235	Caenorhabditis elegans	32.15	1.00e-40	158.00
IUUC-Cja-018849	Callithrix jacchus	39.07	9.00e-63	231.00
IUUC-Cfa-020841	Canis familiaris	39.04	8.00e-61	228.00
IUUC-Cpo-021379	Cavia porcellus	38.48	3.00e-62	229.00
IUUC-Csa-023900	Chlorocebus sabaeus	38.48	4.00e-63	233.00
IUUC-Cho-024660	Choloepus hoffmanni	36.13	1.00e-49	188.00
IUUC-Cin-025471	Ciona intestinalis	34.68	8.00e-49	185.00
IUUC-Csv-026242	Ciona savignyi	39.69	8.00e-48	181.00
IUUC-Cgl-026501	Colletotrichum gloeosporioides	25.99	2.00e-25	108.00
IUUC-Cne-026855	Cryptococcus neoformans	34.21	4.00e-24	103.00
IUUC-Dre-028068	Danio rerio	39.42	2.00e-64	236.00
IUUC-Dno-029981	Dasypus novemcinctus	38.40	8.00e-63	232.00
IUUC-Dse-031420	Dothistroma septosporum	27.50	3.00e-32	130.00
IUUC-Dme-031763	Drosophila melanogaster	35.53	7.00e-54	202.00
IUUC-Ete-032243	Echinops telfairi	41.76	6.00e-17	79.30
IUUC-Eca-033425	Equus caballus	35.81	4.00e-49	186.00
IUUC-Eeu-035119	Erinaceus europaeus	37.50	8.00e-23	99.00
IUUC-Fca-036520	Felis catus	38.48	9.00e-63	231.00
IUUC-Fal-037234	Ficedula albicollis	36.22	2.00e-49	189.00
IUUC-Gmo-039013	Gadus morhua	38.48	4.00e-61	226.00
IUUC-Gga-041059	Gallus gallus	38.48	1.00e-62	231.00
IUUC-Gac-041337	Gasterosteus aculeatus	38.55	2.00e-62	230.00
IUUC-Ggo-044944	Gorilla gorilla	38.48	3.00e-63	233.00
IUUC-Hsa-046038	Homo sapiens	38.48	3.00e-63	233.00
IUUC-Itr-048858	Ictidomys tridecemlineatus	36.45	7.00e-50	188.00
IUUC-Kpa-049201	Komagataella pastoris	38.29	2.00e-74	270.00
IUUC-Lch-050466	Latimeria chalumnae	33.76	8.00e-56	209.00
IUUC-Loc-052773	Lepisosteus oculatus	35.26	1.00e-59	221.00
IUUC-Lma-053000	Leptosphaeria maculans	24.93	2.00e-29	121.00
IUUC-Laf-053409	Loxodonta africana	38.42	2.00e-62	230.00
IUUC-Mla-058820	Melampsora laricipopulina	27.20	4.00e-35	139.00
IUUC-Mga-059348	Meleagris gallopavo	36.45	2.00e-49	187.00
IUUC-Mmr-060977	Microcebus murinus	40.65	2.00e-45	173.00
IUUC-Mdo-061806	Monodelphis domestica	39.07	1.00e-63	234.00
IUUC-Mmu-064328	Mus musculus	39.13	3.00e-66	243.00
IUUC-Mpu-066873	Mustela putorius furo	38.78	5.00e-63	233.00
IUUC-Mlu-067563	Myotis lucifugus	40.36	5.00e-62	229.00
IUUC-Nfi-068299	Neosartorya fischeri	27.49	4.00e-34	136.00
IUUC-Nle-068977	Nomascus leucogenys	38.01	2.00e-55	206.00
IUUC-Ont-072644	Oreochromis niloticus	38.48	5.00e-62	229.00
IUUC-Oan-073098	Ornithorhynchus anatinus	36.66	2.00e-50	190.00
IUUC-Ocu-073911	Oryctolagus cuniculus	38.48	3.00e-63	233.00
IUUC-Ola-087096	Oryzias latipes	39.13	1.00e-63	234.00
IUUC-Oga-088798	Otolemur garnettii	38.78	3.00e-63	233.00
IUUC-Oar-090298	Ovis aries	36.22	2.00e-49	190.00
IUUC-Ptr-091074	Pan troglodytes	38.78	2.00e-63	234.00
IUUC-Pan-092013	Papio anubis	40.47	5.00e-47	179.00
IUUC-Psi-093508	Pelodiscus sinensis	36.45	3.00e-49	186.00
IUUC-Pma-094288	Petromyzon marinus	44.97	4.00e-40	155.00
IUUC-Pno-094777	Phaeosphaeria nodorum	24.45	2.00e-29	121.00
IUUC-Pfo-096384	Poecilia formosa	38.78	8.00e-63	232.00
IUUC-Pab-098629	Pongo abelii	38.78	2.00e-63	234.00
IUUC-Pca-100322	Procavia capensis	43.52	8.00e-21	92.40
IUUC-Pva-102861	Pteropus vampyrus	39.07	1.00e-63	234.00
IUUC-Pte-104375	Pyrenophora teres	26.54	7.00e-31	126.00
IUUC-Pyt-104586	Pyrenophora triticirepentis	26.46	3.00e-31	127.00
IUUC-Rno-104895	Rattus norvegicus	36.94	3.00e-52	199.00
IUUC-Sce-106420	Saccharomyces cerevisiae	39.31	8.00e-83	298.00
IUUC-Sha-106829	Sarcophilus harrisii	35.94	7.00e-53	199.00
IUUC-Spo-108184	Schizosaccharomyces pombe	56.05	7.00e-119	417.00
IUUC-Sar-113279	Sorex araneus	36.45	9.00e-50	188.00
IUUC-Ssc-115589	Sus scrofa	36.51	1.00e-49	187.00
IUUC-Tgu-117523	Taeniopygia guttata	38.19	3.00e-62	229.00
IUUC-Tru-117985	Takifugu rubripes	34.97	7.00e-49	188.00
IUUC-Tsy-118913	Tarsius syrichta	35.99	2.00e-44	170.00
IUUC-Tni-120670	Tetraodon nigroviridis	39.36	4.00e-63	232.00
IUUC-Tme-126885	Tuber melanosporum	39.08	2.00e-76	277.00
IUUC-Tbe-127344	Tupaia belangeri	30.86	3.00e-39	153.00
IUUC-Ttr-128347	Tursiops truncatus	36.45	1.00e-49	188.00
IUUC-Vpa-130656	Vicugna pacos	35.81	1.00e-48	184.00
IUUC-Xtr-132736	Xenopus tropicalis	38.48	5.00e-62	229.00
IUUC-Xma-133678	Xiphophorus maculatus	39.13	5.00e-63	232.00
IUUC-Yli-134659	Yarrowia lipolytica	37.57	9.00e-79	284.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence