iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Dme-031672

Ensembl Protein ID

FBpp0301756

UniProt Accession

A0A0B4KFB7; A0A0B4KFB7_DROME

Genbank Protein ID

AGB93607.1

Protein Name

Guanine nucleotide exchange factor in mesoderm, isoform F

Genbank Nucleotide ID

AE013599

Gene Name

GEFmeso; CG30115; Dmel_CG30115

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
FBgn0050115	FBtr0300421	FBpp0289650
FBgn0050115	FBtr0310055	FBpp0301756

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
ULD/UDP/UFD/PB1	29.67	2.00e-16	83.20	IUUC-Sce-106197

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MDIESDSDTS ERWEDFFGSS TELAPSLLGI YDTLTNSFAA GGVAAAPTAT SHESKASSSG 60
DSTPKRSNSN CSSSSSTGSS TGSCSSVPTS DDQSASYTLA SSSTHLGHQE PPAPLVVAGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCAGTTCACT CTGAGACGCG CGCTGGATAT GTCGTTCCTG GAGCGCTCGA GCTGTTCCTG 60
CGAATGAGCG TGTGTGTGCC AGTGTACCGC CCCCTACCCG TCAAGAAAAA AAAAAGGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000219--DH-domain
IPR011993--PH_dom-like
IPR001849--PH_domain

PROSITE

PS50010--DH_2
PS50003--PH_DOMAIN

Pfam

PF00621--RhoGEF

SMART

SM00233--PH
SM00325--RhoGEF

Gene Ontology

GO:0017160--F:Ral GTPase binding
GO:0005089--F:Rho guanyl-nucleotide exchange factor activity
GO:0007480--P:imaginal disc-derived leg morphogenesis
GO:0007474--P:imaginal disc-derived wing vein specification
GO:0032489--P:regulation of Cdc42 protein signal transduction

KEGG

dme:Dmel_CG30115

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002073	Ailuropoda melanoleuca	30.86	2.00e-23	103.00
IUUC-Apl-004117	Anas platyrhynchos	29.24	3.00e-23	102.00
IUUC-Aca-004793	Anolis carolinensis	29.39	1.00e-22	101.00
IUUC-Ago-008003	Ashbya gossypii	28.77	1.00e-17	84.30
IUUC-Ame-010682	Astyanax mexicanus	28.98	2.00e-22	100.00
IUUC-Bgr-012058	Blumeria graminis	24.07	3.00e-14	73.20
IUUC-Bta-012674	Bos taurus	37.76	8.00e-46	178.00
IUUC-Bci-013634	Botrytis cinerea	22.22	7.00e-11	62.40
IUUC-Cfa-020578	Canis familiaris	30.11	1.00e-23	104.00
IUUC-Cpo-021726	Cavia porcellus	38.07	6.00e-47	182.00
IUUC-Csa-023331	Chlorocebus sabaeus	31.02	1.00e-23	104.00
IUUC-Cho-025069	Choloepus hoffmanni	29.96	3.00e-23	103.00
IUUC-Cin-025453	Ciona intestinalis	30.07	1.00e-25	110.00
IUUC-Csv-025922	Ciona savignyi	32.64	4.00e-26	112.00
IUUC-Cgl-026579	Colletotrichum gloeosporioides	25.90	1.00e-07	51.60
IUUC-Cne-027023	Cryptococcus neoformans	24.15	3.00e-18	87.00
IUUC-Cme-027247	Cyanidioschyzon merolae	26.15	1.00e-06	47.40
IUUC-Dre-028197	Danio rerio	29.51	9.00e-24	106.00
IUUC-Dno-029679	Dasypus novemcinctus	29.67	3.00e-23	103.00
IUUC-Dor-030739	Dipodomys ordii	32.24	3.00e-25	108.00
IUUC-Dse-031545	Dothistroma septosporum	22.48	2.00e-08	54.30
IUUC-Eca-034299	Equus caballus	30.20	5.00e-23	102.00
IUUC-Eeu-034720	Erinaceus europaeus	28.79	1.00e-22	102.00
IUUC-Fca-036416	Felis catus	30.04	1.00e-23	103.00
IUUC-Fal-037035	Ficedula albicollis	28.52	4.00e-23	103.00
IUUC-Fox-037710	Fusarium oxysporum	25.62	2.00e-07	50.80
IUUC-Fso-038080	Fusarium solani	23.11	2.00e-11	63.90
IUUC-Gmo-039587	Gadus morhua	27.34	3.00e-22	99.00
IUUC-Ggr-039728	Gaeumannomyces graminis	28.57	7.00e-09	55.80
IUUC-Gga-040841	Gallus gallus	27.18	8.00e-24	104.00
IUUC-Gac-042498	Gasterosteus aculeatus	30.36	2.00e-22	99.80
IUUC-Ggo-044700	Gorilla gorilla	29.30	5.00e-23	103.00
IUUC-Hsa-045681	Homo sapiens	30.61	3.00e-23	103.00
IUUC-Itr-048380	Ictidomys tridecemlineatus	30.61	2.00e-23	102.00
IUUC-Kpa-049278	Komagataella pastoris	25.93	2.00e-14	73.60
IUUC-Lch-049639	Latimeria chalumnae	27.85	2.00e-22	100.00
IUUC-Loc-051994	Lepisosteus oculatus	28.78	8.00e-24	104.00
IUUC-Meu-056376	Macropus eugenii	28.42	2.00e-24	106.00
IUUC-Mor-057139	Magnaporthe oryzae	29.03	3.00e-08	53.90
IUUC-Mpo-057433	Magnaporthe poae	26.67	4.00e-06	46.60
IUUC-Mla-059044	Melampsora laricipopulina	27.85	2.00e-18	87.40
IUUC-Mga-059644	Meleagris gallopavo	28.88	1.00e-23	105.00
IUUC-Mvi-060486	Microbotryum violaceum	28.22	9.00e-20	91.70
IUUC-Mmu-063143	Mus musculus	30.08	3.00e-24	107.00
IUUC-Mpu-066851	Mustela putorius furo	30.11	5.00e-24	106.00
IUUC-Opr-070209	Ochotona princeps	30.61	4.00e-22	99.00
IUUC-Ont-072091	Oreochromis niloticus	38.60	3.00e-58	219.00
IUUC-Ocu-074885	Oryctolagus cuniculus	30.61	1.00e-23	105.00
IUUC-Ola-087155	Oryzias latipes	30.47	9.00e-24	105.00
IUUC-Oga-088758	Otolemur garnettii	30.20	1.00e-23	105.00
IUUC-Oar-090384	Ovis aries	37.76	6.00e-42	166.00
IUUC-Pan-092037	Papio anubis	31.02	6.00e-24	106.00
IUUC-Pma-094503	Petromyzon marinus	31.37	2.00e-18	87.40
IUUC-Pca-100891	Procavia capensis	29.46	2.00e-23	104.00
IUUC-Pgr-103400	Puccinia graminis	27.13	9.00e-21	95.50
IUUC-Sce-106197	Saccharomyces cerevisiae	29.67	5.00e-17	82.40
IUUC-Sha-107592	Sarcophilus harrisii	30.61	8.00e-24	105.00
IUUC-Spo-108284	Schizosaccharomyces pombe	24.61	2.00e-15	77.00
IUUC-Sar-113369	Sorex araneus	31.31	3.00e-22	99.00
IUUC-Sbi-113782	Sorghum bicolor	22.73	4.40e-01	28.10
IUUC-Sre-115126	Sporisorium reilianum	26.12	8.00e-17	82.00
IUUC-Ssc-115967	Sus scrofa	38.37	3.00e-43	170.00
IUUC-Tgu-117088	Taeniopygia guttata	27.60	1.00e-23	103.00
IUUC-Tru-118716	Takifugu rubripes	30.86	2.00e-22	101.00
IUUC-Tsy-118846	Tarsius syrichta	30.12	6.00e-25	107.00
IUUC-Tni-120887	Tetraodon nigroviridis	29.73	4.00e-22	100.00
IUUC-Tre-121935	Trichoderma reesei	24.14	6.00e-12	65.90
IUUC-Tbe-127248	Tupaia belangeri	30.08	5.00e-24	106.00
IUUC-Ttr-128429	Tursiops truncatus	39.06	1.00e-39	157.00
IUUC-Uma-129594	Ustilago maydis	25.31	3.00e-16	80.10
IUUC-Vda-129831	Verticillium dahliae	25.00	3.00e-07	50.40
IUUC-Vpa-130750	Vicugna pacos	31.43	1.00e-20	95.10
IUUC-Xtr-132676	Xenopus tropicalis	29.80	3.00e-23	102.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence