iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cfa-020067

Ensembl Protein ID

ENSCAFP00000022228.3

UniProt Accession

E2RMT4; E2RMT4_CANLF

Genbank Protein ID

ENSCAFP00000022228

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAEX03004276

Gene Name

ARPC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCAFG00000015081.3	ENSCAFT00000023944.3	ENSCAFP00000022228.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-16	58.7	51	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H++ vt++++ ++ +++v+++ D + +vW 
   Q: 51   HNGQVTGIDWaPEsNRIVTCGTDRNAYVWT 80
           9**********888***************6 PP

Organism

Canis familiaris

Protein Sequence
(Fasta)

MAYHSFLVEP ISCHAWNKDR TQIAICPNNH EVHIYEKSGA KWVKVHELKE HNGQVTGIDW 60
APESNRIVTC GTDRNAYVWT LKGRTWKPTL VILRINRAAR CVRWAPHENK FAVGSGSRVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTACC ACAGCTTCCT GGTGGAGCCC ATCAGCTGCC ACGCCTGGAA CAAGGACCGC 60
ACCCGTGAGT GCTGCGCGCA ACCCACCGGA TGACGTGGGG CGGGGGCCCC CGGACTGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030141--ARC1B
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0070062--C:extracellular exosome
GO:0005925--C:focal adhesion
GO:0051015--F:actin filament binding
GO:0005200--F:structural constituent of cytoskeleton
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

KEGG

cfa:479744

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	45.56	7.00e-64	238.00
IUUC-Aml-001709	Ailuropoda melanoleuca	97.07	0.00e+00	731.00
IUUC-Ame-011512	Astyanax mexicanus	79.78	0.00e+00	647.00
IUUC-Bta-012442	Bos taurus	94.88	0.00e+00	717.00
IUUC-Bol-016274	Brassica oleracea	41.40	2.00e-81	296.00
IUUC-Cja-019899	Callithrix jacchus	95.98	0.00e+00	744.00
IUUC-Cpo-022461	Cavia porcellus	96.24	0.00e+00	727.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	34.69	1.00e-34	139.00
IUUC-Csa-023277	Chlorocebus sabaeus	87.63	0.00e+00	682.00
IUUC-Dre-028141	Danio rerio	80.32	0.00e+00	644.00
IUUC-Dor-030559	Dipodomys ordii	94.62	0.00e+00	728.00
IUUC-Ete-032299	Echinops telfairi	94.35	0.00e+00	738.00
IUUC-Eca-033593	Equus caballus	94.10	0.00e+00	717.00
IUUC-Fca-036254	Felis catus	97.58	0.00e+00	736.00
IUUC-Fal-037453	Ficedula albicollis	88.24	0.00e+00	691.00
IUUC-Gmo-038471	Gadus morhua	69.79	1.00e-161	562.00
IUUC-Gga-040898	Gallus gallus	87.63	0.00e+00	693.00
IUUC-Gac-042236	Gasterosteus aculeatus	73.75	7.00e-175	606.00
IUUC-Ggo-045355	Gorilla gorilla	79.89	2.00e-166	578.00
IUUC-Hsa-046623	Homo sapiens	96.24	0.00e+00	729.00
IUUC-Itr-048596	Ictidomys tridecemlineatus	95.70	0.00e+00	734.00
IUUC-Lch-049679	Latimeria chalumnae	78.98	0.00e+00	636.00
IUUC-Lpe-050869	Leersia perrieri	41.78	5.00e-78	284.00
IUUC-Loc-052140	Lepisosteus oculatus	80.05	0.00e+00	628.00
IUUC-Laf-054287	Loxodonta africana	92.82	0.00e+00	689.00
IUUC-Meu-056302	Macropus eugenii	89.78	0.00e+00	704.00
IUUC-Mga-059279	Meleagris gallopavo	87.63	0.00e+00	694.00
IUUC-Mmr-060752	Microcebus murinus	96.12	0.00e+00	719.00
IUUC-Mdo-062836	Monodelphis domestica	85.75	0.00e+00	666.00
IUUC-Mmu-064099	Mus musculus	94.68	0.00e+00	719.00
IUUC-Mac-064632	Musa acuminata	43.05	1.00e-80	293.00
IUUC-Mpu-066247	Mustela putorius furo	97.58	0.00e+00	717.00
IUUC-Mlu-067571	Myotis lucifugus	95.97	0.00e+00	743.00
IUUC-Nle-069492	Nomascus leucogenys	82.26	1.00e-169	588.00
IUUC-Ont-071316	Oreochromis niloticus	75.59	5.00e-175	607.00
IUUC-Oan-072692	Ornithorhynchus anatinus	87.90	0.00e+00	696.00
IUUC-Ocu-074187	Oryctolagus cuniculus	92.20	0.00e+00	710.00
IUUC-Oba-075379	Oryza barthii	41.92	1.00e-78	286.00
IUUC-Obr-076404	Oryza brachyantha	42.31	4.00e-79	288.00
IUUC-Ogl-077409	Oryza glaberrima	39.51	2.00e-72	266.00
IUUC-Ogu-078759	Oryza glumaepatula	41.92	2.00e-78	286.00
IUUC-Oin-079118	Oryza indica	41.96	3.00e-79	288.00
IUUC-Olo-081055	Oryza longistaminata	42.32	3.00e-69	254.00
IUUC-Ome-081281	Oryza meridionalis	41.92	2.00e-78	286.00
IUUC-Oni-083043	Oryza nivara	41.92	1.00e-78	286.00
IUUC-Oru-084839	Oryza rufipogon	41.92	1.00e-78	286.00
IUUC-Osa-085377	Oryza sativa	41.96	3.00e-79	288.00
IUUC-Oga-088610	Otolemur garnettii	96.51	0.00e+00	729.00
IUUC-Oar-089639	Ovis aries	93.80	0.00e+00	701.00
IUUC-Ptr-091023	Pan troglodytes	95.97	0.00e+00	726.00
IUUC-Pan-091727	Papio anubis	95.70	0.00e+00	736.00
IUUC-Pfo-097058	Poecilia formosa	73.75	8.00e-175	606.00
IUUC-Pab-098238	Pongo abelii	95.97	0.00e+00	733.00
IUUC-Pca-100580	Procavia capensis	94.62	0.00e+00	709.00
IUUC-Ppe-101681	Prunus persica	41.82	6.00e-80	291.00
IUUC-Pva-102928	Pteropus vampyrus	94.09	0.00e+00	694.00
IUUC-Rno-104846	Rattus norvegicus	95.16	0.00e+00	723.00
IUUC-Sly-111048	Solanum lycopersicum	42.05	3.00e-77	282.00
IUUC-Sar-113404	Sorex araneus	78.00	4.00e-157	547.00
IUUC-Sbi-114685	Sorghum bicolor	41.53	1.00e-78	286.00
IUUC-Tru-118106	Takifugu rubripes	74.47	1.00e-177	615.00
IUUC-Tni-120079	Tetraodon nigroviridis	75.00	6.00e-178	616.00
IUUC-Tae-125810	Triticum aestivum	37.80	6.00e-71	261.00
IUUC-Tur-126640	Triticum urartu	40.06	7.00e-69	254.00
IUUC-Ttr-128698	Tursiops truncatus	96.24	0.00e+00	729.00
IUUC-Vvi-131647	Vitis vinifera	41.35	3.00e-79	288.00
IUUC-Xtr-131893	Xenopus tropicalis	83.06	0.00e+00	657.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence