iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-091023

Ensembl Protein ID

ENSPTRP00000033278.3

UniProt Accession

H2QV01; H2QV01_PANTR

Genbank Protein ID

JAA03978.1; JAA28266.1; JAA44434.1; JAA44435.1; JAA44436.1

Protein Name

Actin related protein 2/3 complex, subunit 1B, 41kDa

Genbank Nucleotide ID

AC146396; GABD01004834; GABE01000305; GABE01000304; GABE01000303

Gene Name

ARPC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000019449.4	ENSPTRT00000036000.3	ENSPTRP00000033278.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.00e-17	60.9	51	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H++ vt++++ ++ +++v+++ D + +vW l
   Q: 51   HNGQVTGIDWaPEsNRIVTCGTDRNAYVWTL 81
           9**********888***************75 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MAYHSFLVEP ISCHAWNKDR TQIAICPNNH EVHIYEKSGA KWTKVHELKE HNGQVTGIDW 60
APESNRIVTC GTDRNAYVWT LKGHTWKPTL VILRINRAAR CVRWAPNENK FAVGSGSRVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCAGGCCCC GCCCCCCGCC CACGAGGAAG TGGCTGCTGC TCCGGCGCGG AGCCCAGAGC 60
CGGTTCGGCG CGTCGACTGC CCAGAGTCCG CGGCCGGGGC GCGGGAGGTG AGGGCCGTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030141--ARC1B
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0070062--C:extracellular exosome
GO:0005925--C:focal adhesion
GO:0051015--F:actin filament binding
GO:0005200--F:structural constituent of cytoskeleton
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

KEGG

ptr:463568

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	44.84	2.00e-64	239.00
IUUC-Aml-001709	Ailuropoda melanoleuca	96.28	0.00e+00	728.00
IUUC-Aly-006568	Arabidopsis lyrata	41.08	8.00e-80	290.00
IUUC-Ath-006683	Arabidopsis thaliana	41.62	6.00e-80	290.00
IUUC-Ame-011512	Astyanax mexicanus	80.86	0.00e+00	654.00
IUUC-Bta-012442	Bos taurus	95.69	0.00e+00	721.00
IUUC-Bol-016274	Brassica oleracea	40.97	3.00e-82	298.00
IUUC-Bra-016790	Brassica rapa	40.70	1.00e-80	293.00
IUUC-Cja-019899	Callithrix jacchus	97.59	0.00e+00	754.00
IUUC-Cfa-020067	Canis familiaris	95.97	0.00e+00	726.00
IUUC-Cpo-022461	Cavia porcellus	98.92	0.00e+00	738.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	35.20	3.00e-35	141.00
IUUC-Csa-023277	Chlorocebus sabaeus	90.59	0.00e+00	694.00
IUUC-Dre-028141	Danio rerio	80.59	0.00e+00	647.00
IUUC-Dor-030559	Dipodomys ordii	97.04	0.00e+00	739.00
IUUC-Ete-032299	Echinops telfairi	94.09	0.00e+00	737.00
IUUC-Eca-033593	Equus caballus	96.51	0.00e+00	729.00
IUUC-Fca-036254	Felis catus	97.58	0.00e+00	735.00
IUUC-Fal-037453	Ficedula albicollis	88.50	0.00e+00	696.00
IUUC-Gmo-038471	Gadus morhua	70.05	1.00e-162	565.00
IUUC-Gga-040898	Gallus gallus	87.90	0.00e+00	698.00
IUUC-Gac-042236	Gasterosteus aculeatus	74.80	6.00e-177	613.00
IUUC-Gma-042803	Glycine max	40.80	3.00e-79	288.00
IUUC-Ggo-045355	Gorilla gorilla	83.38	2.00e-171	594.00
IUUC-Hsa-046623	Homo sapiens	99.73	0.00e+00	745.00
IUUC-Itr-048596	Ictidomys tridecemlineatus	98.12	0.00e+00	747.00
IUUC-Kpa-049288	Komagataella pastoris	41.64	2.00e-75	275.00
IUUC-Lch-049679	Latimeria chalumnae	78.98	0.00e+00	637.00
IUUC-Lpe-050869	Leersia perrieri	41.50	5.00e-79	287.00
IUUC-Loc-052140	Lepisosteus oculatus	80.59	0.00e+00	633.00
IUUC-Laf-054287	Loxodonta africana	93.35	0.00e+00	696.00
IUUC-Meu-056302	Macropus eugenii	90.59	0.00e+00	712.00
IUUC-Mtr-057659	Medicago truncatula	40.21	6.00e-82	297.00
IUUC-Mga-059279	Meleagris gallopavo	87.90	0.00e+00	699.00
IUUC-Mmr-060752	Microcebus murinus	97.23	0.00e+00	723.00
IUUC-Mdo-062836	Monodelphis domestica	86.56	0.00e+00	673.00
IUUC-Mmu-064099	Mus musculus	96.01	0.00e+00	725.00
IUUC-Mpu-066247	Mustela putorius furo	97.31	0.00e+00	720.00
IUUC-Mlu-067571	Myotis lucifugus	96.51	0.00e+00	746.00
IUUC-Nle-069492	Nomascus leucogenys	85.22	2.00e-173	601.00
IUUC-Opr-070519	Ochotona princeps	98.68	2.00e-134	471.00
IUUC-Ont-071316	Oreochromis niloticus	76.38	3.00e-176	610.00
IUUC-Oan-072692	Ornithorhynchus anatinus	88.98	0.00e+00	703.00
IUUC-Ocu-074187	Oryctolagus cuniculus	93.01	0.00e+00	712.00
IUUC-Oba-075379	Oryza barthii	41.64	1.00e-79	290.00
IUUC-Obr-076404	Oryza brachyantha	42.03	2.00e-80	292.00
IUUC-Ogl-077409	Oryza glaberrima	39.24	1.00e-73	270.00
IUUC-Ogu-078759	Oryza glumaepatula	41.64	1.00e-79	290.00
IUUC-Oin-079118	Oryza indica	41.69	2.00e-80	292.00
IUUC-Olo-081055	Oryza longistaminata	41.03	2.00e-70	259.00
IUUC-Ome-081281	Oryza meridionalis	41.64	2.00e-79	289.00
IUUC-Oni-083043	Oryza nivara	41.64	1.00e-79	290.00
IUUC-Oru-084839	Oryza rufipogon	41.64	1.00e-79	290.00
IUUC-Osa-085377	Oryza sativa	41.69	2.00e-80	292.00
IUUC-Oga-088610	Otolemur garnettii	97.58	0.00e+00	735.00
IUUC-Oar-089639	Ovis aries	94.34	0.00e+00	704.00
IUUC-Pan-091727	Papio anubis	99.19	0.00e+00	751.00
IUUC-Pfo-097058	Poecilia formosa	74.54	4.00e-176	610.00
IUUC-Pab-098238	Pongo abelii	99.46	0.00e+00	748.00
IUUC-Pca-100580	Procavia capensis	94.62	0.00e+00	714.00
IUUC-Ppe-101681	Prunus persica	41.69	2.00e-81	295.00
IUUC-Pva-102928	Pteropus vampyrus	94.35	0.00e+00	696.00
IUUC-Rno-104846	Rattus norvegicus	96.51	0.00e+00	728.00
IUUC-Sly-111048	Solanum lycopersicum	42.32	2.00e-78	285.00
IUUC-Sar-113404	Sorex araneus	78.29	3.00e-157	547.00
IUUC-Sbi-114685	Sorghum bicolor	41.53	4.00e-78	285.00
IUUC-Tru-118106	Takifugu rubripes	74.47	5.00e-178	616.00
IUUC-Tni-120079	Tetraodon nigroviridis	75.79	1.00e-179	622.00
IUUC-Tae-125810	Triticum aestivum	37.23	5.00e-71	261.00
IUUC-Tur-126640	Triticum urartu	39.50	5.00e-69	254.00
IUUC-Ttr-128698	Tursiops truncatus	96.77	0.00e+00	731.00
IUUC-Vvi-131647	Vitis vinifera	41.76	8.00e-81	293.00
IUUC-Xtr-131893	Xenopus tropicalis	83.60	0.00e+00	663.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence