iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-097648

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01096970

Gene Name

TRIM4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000017391.2	ENSPPYT00000020258.2	ENSPPYP00000019488.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.40e-09	37.2	12	53
E3 activity/RING/U-box	4.00e-08	33.3	7	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCl+ f+d p++  CgH f++ Cl   w     s  + f CP Cr
   Q: 12   CPICLDYFQD-PVSIECGHNFCRGCLhRSW----ASGGGPFPCPECR 53
           **********.***************9999....99**********8 PP

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPnltlrrliqa 67
            ee+ CpI l+ ++dPv +++G+ + r ++++  asgg    cP +r+p ++  l Pn +l rl ++
   Q: 7    QEELTCPICLDYFQDPVSIECGHNFCRGCLHRSWASGGGpfPCPECRHPSAPAALRPNWALARLTEK 73
           6899**************************98666666669*******************9998776 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MEAEDLQEEL TCPICLDYFQ DPVSIECGHN FCRGCLHRSW ASGGGPFPCP ECRHPSAPAA 60
LRPNWALARL TEKTQRRRLG PVPPGLCGRH WEPLRLFCED DQRPVCLVCR ESQEHQTHAM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCACCTCGCG CTTCCGGCGC GGATACCCAG CAGCTTCCGG TCTTGCGCGC TCAGGTCGGG 60
CAACGTCCGT GCGTTCTTTT GGGTCCTGAA CCCCGGAAGA GAAACTGCGC AGTCCCCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005829--C:cytosol
GO:0005886--C:plasma membrane
GO:0008270--F:zinc ion binding
GO:0070206--P:protein trimerization

KEGG

pon:100438007

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002308	Ailuropoda melanoleuca	66.67	1.00e-162	565.00
IUUC-Cja-019204	Callithrix jacchus	83.20	0.00e+00	806.00
IUUC-Cfa-021283	Canis familiaris	78.32	0.00e+00	734.00
IUUC-Csa-023476	Chlorocebus sabaeus	95.99	0.00e+00	899.00
IUUC-Cho-024657	Choloepus hoffmanni	66.67	1.00e-166	579.00
IUUC-Eca-033740	Equus caballus	77.91	3.00e-151	527.00
IUUC-Hsa-046707	Homo sapiens	93.60	0.00e+00	913.00
IUUC-Mcc-055643	Macaca mulatta	92.48	0.00e+00	890.00
IUUC-Mmr-061318	Microcebus murinus	79.37	0.00e+00	768.00
IUUC-Mpu-066377	Mustela putorius furo	75.79	0.00e+00	691.00
IUUC-Mlu-067319	Myotis lucifugus	75.07	2.00e-143	501.00
IUUC-Nle-069382	Nomascus leucogenys	95.64	3.00e-180	624.00
IUUC-Opr-070278	Ochotona princeps	63.73	1.00e-171	596.00
IUUC-Oga-088830	Otolemur garnettii	69.89	5.00e-163	567.00
IUUC-Oar-089188	Ovis aries	74.95	0.00e+00	702.00
IUUC-Pan-092332	Papio anubis	91.94	0.00e+00	890.00
IUUC-Pva-102131	Pteropus vampyrus	71.89	0.00e+00	693.00
IUUC-Ssc-116309	Sus scrofa	66.07	2.00e-170	592.00
IUUC-Tsy-119365	Tarsius syrichta	73.84	7.00e-132	463.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence