iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-003834

Ensembl Protein ID

ENSAPLP00000009243.1

UniProt Accession

U3IPS0; U3IPS0_ANAPL

Genbank Protein ID

ENSAPLP00000009243

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADON01091636

Gene Name

RNF6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000009544.1	ENSAPLT00000009932.1	ENSAPLP00000009243.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.20e-07	31.0	622	663

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C +++   + ++ lpC H fh +C+ +w       s + +CP+Cr
   Q: 622  CSVCINEYvtGNKLRQLPCMHEFHIHCIDRW------LSENSTCPICR 663
           ********7744499****************......**********8 PP

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

MDRSRHRAGN GNEQASSREH SYGEDERQRQ RERLSREEAY YQFINELNEE DYRLMRDRNL 60
LGTPGEITAE ELQQRLEGAK ERLASQADLE NREVNLRNSD VLGENSNGDS LLEWLNTFRR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCGCT CTCGGCACCG TGCAGGGAAC GGCAACGAGC AGGCATCTTC ACGAGAGCAC 60
AGCTATGGCG AGGATGAGAG GCAGCGGCAG CGGGAGCGCC TCAGCAGGGA GGAAGCCTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0030424--C:axon
GO:0005737--C:cytoplasm
GO:0031965--C:nuclear membrane
GO:0016605--C:PML body
GO:0003677--F:DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0030517--P:negative regulation of axon extension
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0044314--P:protein K27-linked ubiquitination
GO:0070936--P:protein K48-linked ubiquitination
GO:0085020--P:protein K6-linked ubiquitination
GO:0060765--P:regulation of androgen receptor signaling pathway
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000396	Aegilops tauschii	56.60	7.00e-16	77.80
IUUC-Aml-001415	Ailuropoda melanoleuca	59.51	0.00e+00	666.00
IUUC-Atr-003049	Amborella trichopoda	39.29	3.00e-15	74.30
IUUC-Aca-004373	Anolis carolinensis	57.06	6.00e-172	597.00
IUUC-Aly-005870	Arabidopsis lyrata	42.42	3.00e-19	89.00
IUUC-Ath-006611	Arabidopsis thaliana	42.42	3.00e-19	89.00
IUUC-Ame-011730	Astyanax mexicanus	70.69	1.00e-101	363.00
IUUC-Bta-012763	Bos taurus	55.46	4.00e-163	567.00
IUUC-Bdi-015038	Brachypodium distachyon	52.54	1.00e-15	76.60
IUUC-Bol-015406	Brassica oleracea	43.24	2.00e-14	73.60
IUUC-Bra-016948	Brassica rapa	43.24	2.00e-14	73.60
IUUC-Cja-018980	Callithrix jacchus	59.77	0.00e+00	681.00
IUUC-Cfa-020416	Canis familiaris	58.72	0.00e+00	663.00
IUUC-Cpo-022086	Cavia porcellus	52.44	2.00e-150	525.00
IUUC-Csa-023246	Chlorocebus sabaeus	60.80	0.00e+00	672.00
IUUC-Cho-024749	Choloepus hoffmanni	58.15	2.00e-153	535.00
IUUC-Cme-027313	Cyanidioschyzon merolae	50.00	4.00e-12	65.50
IUUC-Dre-028428	Danio rerio	67.92	9.00e-100	357.00
IUUC-Dno-029617	Dasypus novemcinctus	58.93	0.00e+00	654.00
IUUC-Dor-030800	Dipodomys ordii	66.67	6.00e-80	291.00
IUUC-Ete-032882	Echinops telfairi	56.25	4.00e-110	392.00
IUUC-Eca-033892	Equus caballus	61.20	0.00e+00	695.00
IUUC-Eeu-034563	Erinaceus europaeus	65.88	2.00e-85	310.00
IUUC-Fca-035765	Felis catus	58.06	0.00e+00	630.00
IUUC-Fal-036981	Ficedula albicollis	81.44	0.00e+00	954.00
IUUC-Gmo-039344	Gadus morhua	67.71	3.00e-109	389.00
IUUC-Gga-041114	Gallus gallus	86.89	0.00e+00	952.00
IUUC-Gac-042220	Gasterosteus aculeatus	69.90	2.00e-111	395.00
IUUC-Gma-043586	Glycine max	41.10	1.00e-14	74.70
IUUC-Ggo-044902	Gorilla gorilla	60.09	0.00e+00	711.00
IUUC-Hsa-046548	Homo sapiens	60.09	0.00e+00	709.00
IUUC-Hvu-047764	Hordeum vulgare	56.60	2.00e-16	79.30
IUUC-Itr-048447	Ictidomys tridecemlineatus	59.19	0.00e+00	685.00
IUUC-Lch-050541	Latimeria chalumnae	62.23	1.00e-118	420.00
IUUC-Lpe-051339	Leersia perrieri	48.57	2.00e-15	77.00
IUUC-Laf-054296	Loxodonta africana	59.15	0.00e+00	633.00
IUUC-Mcc-054858	Macaca mulatta	59.65	0.00e+00	678.00
IUUC-Meu-056296	Macropus eugenii	60.36	6.00e-116	410.00
IUUC-Mpo-057470	Magnaporthe poae	48.89	4.00e-12	66.20
IUUC-Mtr-057986	Medicago truncatula	44.12	9.00e-15	72.40
IUUC-Mga-059307	Meleagris gallopavo	85.44	0.00e+00	903.00
IUUC-Mmr-060699	Microcebus murinus	59.94	0.00e+00	678.00
IUUC-Mdo-062162	Monodelphis domestica	64.69	0.00e+00	695.00
IUUC-Mmu-064188	Mus musculus	54.50	7.00e-162	563.00
IUUC-Mac-065090	Musa acuminata	46.58	2.00e-14	72.80
IUUC-Mpu-065891	Mustela putorius furo	59.22	0.00e+00	649.00
IUUC-Mlu-067177	Myotis lucifugus	58.94	0.00e+00	628.00
IUUC-Nle-069127	Nomascus leucogenys	59.80	0.00e+00	704.00
IUUC-Ont-072086	Oreochromis niloticus	64.12	2.00e-111	396.00
IUUC-Ocu-074281	Oryctolagus cuniculus	71.53	5.00e-50	189.00
IUUC-Oba-075878	Oryza barthii	48.57	1.00e-15	77.00
IUUC-Obr-076120	Oryza brachyantha	48.57	7.00e-16	77.80
IUUC-Ogl-077906	Oryza glaberrima	48.57	1.00e-15	77.00
IUUC-Ogu-078031	Oryza glumaepatula	48.57	1.00e-15	76.60
IUUC-Oin-079270	Oryza indica	48.57	2.00e-15	76.60
IUUC-Olo-080996	Oryza longistaminata	48.57	1.00e-15	77.00
IUUC-Ome-081784	Oryza meridionalis	48.57	2.00e-15	76.60
IUUC-Oni-082697	Oryza nivara	48.57	1.00e-15	77.00
IUUC-Opu-083782	Oryza punctata	48.57	1.00e-15	77.40
IUUC-Oru-084352	Oryza rufipogon	48.57	1.00e-15	77.00
IUUC-Osa-085627	Oryza sativa	48.57	1.00e-15	77.00
IUUC-Ola-087452	Oryzias latipes	66.78	2.00e-108	386.00
IUUC-Oga-088750	Otolemur garnettii	59.59	0.00e+00	665.00
IUUC-Oar-089523	Ovis aries	54.96	3.00e-163	568.00
IUUC-Ptr-091533	Pan troglodytes	59.94	0.00e+00	706.00
IUUC-Pan-092675	Papio anubis	59.65	0.00e+00	661.00
IUUC-Psi-093735	Pelodiscus sinensis	73.11	0.00e+00	895.00
IUUC-Ppa-095806	Physcomitrella patens	42.05	7.00e-16	78.60
IUUC-Pfo-096637	Poecilia formosa	69.93	1.00e-110	393.00
IUUC-Pab-098486	Pongo abelii	60.38	0.00e+00	715.00
IUUC-Pop-098950	Populus trichocarpa	47.37	5.00e-15	74.70
IUUC-Pca-100143	Procavia capensis	67.74	3.00e-110	392.00
IUUC-Pva-103151	Pteropus vampyrus	58.43	0.00e+00	632.00
IUUC-Rno-105745	Rattus norvegicus	54.56	7.00e-159	553.00
IUUC-Sha-106681	Sarcophilus harrisii	65.63	0.00e+00	704.00
IUUC-Sit-110112	Setaria italica	39.73	5.00e-13	68.60
IUUC-Sar-113229	Sorex araneus	69.02	2.00e-108	385.00
IUUC-Sbi-113958	Sorghum bicolor	53.23	2.00e-16	79.00
IUUC-Ssc-115345	Sus scrofa	67.09	9.00e-54	204.00
IUUC-Tgu-117477	Taeniopygia guttata	76.81	0.00e+00	890.00
IUUC-Tru-118302	Takifugu rubripes	67.22	2.00e-110	392.00
IUUC-Tsy-119338	Tarsius syrichta	49.34	1.00e-144	506.00
IUUC-Tni-119675	Tetraodon nigroviridis	62.08	7.00e-95	340.00
IUUC-Tca-121848	Theobroma cacao	49.35	1.00e-15	77.00
IUUC-Tae-125370	Triticum aestivum	56.60	3.00e-16	78.20
IUUC-Tur-125977	Triticum urartu	36.61	6.00e-16	77.80
IUUC-Ttr-128367	Tursiops truncatus	56.68	1.00e-145	509.00
IUUC-Vpa-130480	Vicugna pacos	65.64	1.00e-109	390.00
IUUC-Xma-133863	Xiphophorus maculatus	70.17	2.00e-110	392.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence