iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115884

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP326723

Gene Name

LRWD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000025047.1	ENSSSCT00000029637.1	ENSSSCP00000021661.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.60e-07	29.6	393	423

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H+  +  l+f  +  t+l ++s+D+ i +WD
   Q: 393  HKKAIATLCFspTHeTHLFTASYDKRIVLWD 423
           88889999***6447**************** PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MGPLSVRLLI QRGRPKSDRL GKIRSLDLSG LKLLSEHLDP KLLSRLKQLQ ELDLSNNQLE 60
TLPANLGLSH LRILRCANNQ LGDVTALCQF PQLEELSLEG NPFLTVSDNL KVSFLLPKLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCCGGCGAC GGATTCGCGC GGCGCCACCT CCTGGACTCG GCAAACCGCT GGCGCCAGCA 60
CCGGAGTCCC GTGCCGCCGT TCGGGCCACC GCGAGCCGCG CCTCCCCGCC ATGGGCCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0433--Leucine-rich repeat
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR025875--Leu-rich_rpt_4
IPR003591--Leu-rich_rpt_typical-subtyp
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS51450--LRR
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12799--LRR_4

SMART

SM00369--LRR_TYP
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001948	Ailuropoda melanoleuca	84.14	0.00e+00	676.00
IUUC-Bta-012858	Bos taurus	83.20	0.00e+00	1051.00
IUUC-Cja-019702	Callithrix jacchus	87.52	0.00e+00	1051.00
IUUC-Cfa-020910	Canis familiaris	89.83	0.00e+00	1119.00
IUUC-Cpo-022523	Cavia porcellus	81.29	0.00e+00	1068.00
IUUC-Csa-023359	Chlorocebus sabaeus	87.37	0.00e+00	1086.00
IUUC-Dno-029426	Dasypus novemcinctus	88.58	0.00e+00	1079.00
IUUC-Dor-030654	Dipodomys ordii	79.74	0.00e+00	828.00
IUUC-Eca-034035	Equus caballus	88.43	0.00e+00	1098.00
IUUC-Eeu-034711	Erinaceus europaeus	76.92	1.00e-169	589.00
IUUC-Gmo-039096	Gadus morhua	35.74	8.00e-108	384.00
IUUC-Ggo-044714	Gorilla gorilla	86.75	0.00e+00	1050.00
IUUC-Hsa-046826	Homo sapiens	87.06	0.00e+00	1053.00
IUUC-Laf-054449	Loxodonta africana	87.35	0.00e+00	1095.00
IUUC-Mcc-055193	Macaca mulatta	87.83	0.00e+00	1056.00
IUUC-Mmr-061572	Microcebus murinus	86.57	0.00e+00	1094.00
IUUC-Mmu-063240	Mus musculus	78.24	0.00e+00	974.00
IUUC-Mpu-066295	Mustela putorius furo	88.43	0.00e+00	1099.00
IUUC-Mlu-067766	Myotis lucifugus	88.29	0.00e+00	1122.00
IUUC-Nle-069200	Nomascus leucogenys	84.59	0.00e+00	979.00
IUUC-Ola-086965	Oryzias latipes	32.08	2.00e-92	333.00
IUUC-Oga-088411	Otolemur garnettii	80.64	0.00e+00	1067.00
IUUC-Oar-089415	Ovis aries	84.18	0.00e+00	999.00
IUUC-Ptr-090663	Pan troglodytes	86.90	0.00e+00	1051.00
IUUC-Pan-092467	Papio anubis	86.94	0.00e+00	1034.00
IUUC-Pab-098479	Pongo abelii	87.21	0.00e+00	1053.00
IUUC-Pca-101023	Procavia capensis	74.69	0.00e+00	867.00
IUUC-Pva-102812	Pteropus vampyrus	84.72	0.00e+00	1075.00
IUUC-Rno-105469	Rattus norvegicus	78.52	0.00e+00	994.00
IUUC-Tbe-127247	Tupaia belangeri	85.91	3.00e-133	468.00
IUUC-Ttr-128723	Tursiops truncatus	91.05	0.00e+00	1138.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence