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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105904
Ensembl Protein ID ENSRNOP00000025325.3
UniProt Accession Q9ERH3; Q920I8; WDR7_RAT
Genbank Protein ID AAL03984.1; AAG31140.1
Protein Name WD repeat-containing protein 7; TGF-beta resistance-associated protein TRAG
Genbank Nucleotide ID AF192379; AF305813
Gene Name Wdr7; Trag
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000018387.4 ENSRNOT00000025325.3 ENSRNOP00000025325.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPAFPhosphositePlus
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 9.20e-30 101.8 21 49
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 5    svtclaf.sd.tllvsGsdDgtikvWDlr 31
            ++++ + +d +++v+G++Dg+i +WDl+
   Q: 21   CISSILLtDDgGTIVTGCHDGQICLWDLS 49
           46677568778****************86 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MAGNSLVLPI VLWGRKAPTH CISSILLTDD GGTIVTGCHD GQICLWDLSE ELEVNPRALL 60
FGHTAAITCL SKACASGDKQ YTVSASANGE MCLWDVNDGR CIEFTKLACT HTGIQFYQFS 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105904|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCGGCGGCGG TGGCTCCTTG CAACCAGGCA GGGTGAGGTC GGCTGCACCT GCTTGGGGTC 60
CCTCGGGGTC GCCCACCCGG AATTGCCCGG CTGGTCCTCC TCACGTACGC CGCCTTCTTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105904|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR011989--ARM-like
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0008021--C:synaptic vesicle
GO:0002244--P:hematopoietic progenitor cell differentiation
KEGG rno:66031
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000634 Aegilops tauschii 24.08 9.00e-13 68.90
IUUC-Aml-001481 Ailuropoda melanoleuca 95.03 0.00e+00 2788.00
IUUC-Atr-002981 Amborella trichopoda 25.00 4.00e-08 54.70
IUUC-Apl-003943 Anas platyrhynchos 85.24 0.00e+00 1742.00
IUUC-Aca-005145 Anolis carolinensis 87.67 0.00e+00 2583.00
IUUC-Ame-011180 Astyanax mexicanus 71.90 0.00e+00 2096.00
IUUC-Bta-012912 Bos taurus 93.76 0.00e+00 2778.00
IUUC-Cel-018565 Caenorhabditis elegans 35.05 3.00e-99 357.00
IUUC-Cja-019970 Callithrix jacchus 93.18 0.00e+00 2622.00
IUUC-Cfa-020677 Canis familiaris 94.23 0.00e+00 2768.00
IUUC-Cpo-021408 Cavia porcellus 94.03 0.00e+00 2789.00
IUUC-Csa-023786 Chlorocebus sabaeus 94.60 0.00e+00 2575.00
IUUC-Cho-024612 Choloepus hoffmanni 92.01 0.00e+00 1134.00
IUUC-Cin-025255 Ciona intestinalis 40.63 0.00e+00 1013.00
IUUC-Csv-026361 Ciona savignyi 40.42 0.00e+00 971.00
IUUC-Cne-026981 Cryptococcus neoformans 25.83 1.00e-20 96.30
IUUC-Dre-027951 Danio rerio 79.70 0.00e+00 1021.00
IUUC-Dno-029072 Dasypus novemcinctus 93.38 0.00e+00 2749.00
IUUC-Dor-030771 Dipodomys ordii 87.04 0.00e+00 1455.00
IUUC-Dme-031768 Drosophila melanogaster 40.20 0.00e+00 777.00
IUUC-Ete-032492 Echinops telfairi 83.83 0.00e+00 2280.00
IUUC-Eca-033496 Equus caballus 94.56 0.00e+00 2780.00
IUUC-Eeu-034689 Erinaceus europaeus 87.79 0.00e+00 726.00
IUUC-Fca-035530 Felis catus 94.50 0.00e+00 2780.00
IUUC-Fal-037238 Ficedula albicollis 81.26 0.00e+00 2254.00
IUUC-Gmo-039528 Gadus morhua 75.94 0.00e+00 2142.00
IUUC-Gga-041043 Gallus gallus 84.51 0.00e+00 1976.00
IUUC-Gac-042524 Gasterosteus aculeatus 77.36 0.00e+00 2202.00
IUUC-Gma-043201 Glycine max 21.62 6.00e-11 63.90
IUUC-Ggo-045112 Gorilla gorilla 94.71 0.00e+00 2785.00
IUUC-Hsa-046732 Homo sapiens 94.56 0.00e+00 2781.00
IUUC-Itr-048340 Ictidomys tridecemlineatus 94.85 0.00e+00 938.00
IUUC-Lch-050643 Latimeria chalumnae 82.95 0.00e+00 2010.00
IUUC-Lpe-051544 Leersia perrieri 24.37 4.00e-10 61.20
IUUC-Loc-051774 Lepisosteus oculatus 78.41 0.00e+00 2129.00
IUUC-Laf-054349 Loxodonta africana 94.23 0.00e+00 2749.00
IUUC-Mcc-055800 Macaca mulatta 94.83 0.00e+00 2794.00
IUUC-Meu-056091 Macropus eugenii 89.59 0.00e+00 1702.00
IUUC-Mtr-058676 Medicago truncatula 21.99 7.00e-12 67.00
IUUC-Mga-060096 Meleagris gallopavo 64.89 0.00e+00 1158.00
IUUC-Mmr-061271 Microcebus murinus 94.77 0.00e+00 2767.00
IUUC-Mdo-062622 Monodelphis domestica 91.21 0.00e+00 2684.00
IUUC-Mmu-063262 Mus musculus 97.38 0.00e+00 2823.00
IUUC-Mpu-066523 Mustela putorius furo 94.43 0.00e+00 2763.00
IUUC-Mlu-067288 Myotis lucifugus 92.58 0.00e+00 2720.00
IUUC-Nle-069610 Nomascus leucogenys 93.15 0.00e+00 2734.00
IUUC-Opr-070413 Ochotona princeps 88.88 0.00e+00 1348.00
IUUC-Ont-072199 Oreochromis niloticus 78.20 0.00e+00 2230.00
IUUC-Oan-073095 Ornithorhynchus anatinus 91.34 0.00e+00 2705.00
IUUC-Ocu-074257 Oryctolagus cuniculus 94.90 0.00e+00 2787.00
IUUC-Oba-075713 Oryza barthii 24.87 9.00e-11 63.50
IUUC-Obr-076894 Oryza brachyantha 25.77 4.00e-10 61.20
IUUC-Ogl-077521 Oryza glaberrima 24.87 1.00e-10 63.20
IUUC-Ogu-078103 Oryza glumaepatula 24.87 2.00e-10 62.00
IUUC-Oin-080169 Oryza indica 24.87 9.00e-11 63.20
IUUC-Olo-080818 Oryza longistaminata 21.21 2.00e-13 72.00
IUUC-Ome-081902 Oryza meridionalis 24.87 1.00e-10 63.20
IUUC-Oni-082333 Oryza nivara 25.26 1.00e-10 62.80
IUUC-Opu-083952 Oryza punctata 25.38 7.00e-11 63.90
IUUC-Oru-085112 Oryza rufipogon 24.87 1.00e-10 63.20
IUUC-Osa-085615 Oryza sativa 24.87 8.00e-11 62.40
IUUC-Ola-087177 Oryzias latipes 77.10 0.00e+00 2166.00
IUUC-Oga-088290 Otolemur garnettii 93.69 0.00e+00 2778.00
IUUC-Oar-089575 Ovis aries 92.61 0.00e+00 2728.00
IUUC-Ptr-091041 Pan troglodytes 94.90 0.00e+00 2793.00
IUUC-Pan-092048 Papio anubis 94.97 0.00e+00 2794.00
IUUC-Psi-093637 Pelodiscus sinensis 89.72 0.00e+00 2688.00
IUUC-Pma-094714 Petromyzon marinus 63.51 0.00e+00 1075.00
IUUC-Pfo-096529 Poecilia formosa 67.87 0.00e+00 1906.00
IUUC-Pab-098194 Pongo abelii 94.97 0.00e+00 2795.00
IUUC-Pop-099546 Populus trichocarpa 21.68 1.00e-09 59.70
IUUC-Pca-100950 Procavia capensis 90.62 0.00e+00 686.00
IUUC-Ppe-101653 Prunus persica 20.60 8.00e-08 53.50
IUUC-Pva-102803 Pteropus vampyrus 93.44 0.00e+00 2733.00
IUUC-Sha-106926 Sarcophilus harrisii 71.42 0.00e+00 1410.00
IUUC-Smo-109304 Selaginella moellendorffii 23.58 3.00e-21 97.80
IUUC-Sit-110049 Setaria italica 26.51 2.00e-10 61.20
IUUC-Sly-111516 Solanum lycopersicum 21.07 1.00e-10 63.20
IUUC-Stu-111982 Solanum tuberosum 20.96 2.00e-09 58.90
IUUC-Sar-113730 Sorex araneus 86.11 0.00e+00 1863.00
IUUC-Sbi-114887 Sorghum bicolor 28.40 2.00e-11 64.70
IUUC-Ssc-116213 Sus scrofa 91.48 0.00e+00 1864.00
IUUC-Tgu-117297 Taeniopygia guttata 84.77 0.00e+00 2563.00
IUUC-Tru-117887 Takifugu rubripes 77.84 0.00e+00 2188.00
IUUC-Tsy-118970 Tarsius syrichta 89.80 0.00e+00 2450.00
IUUC-Tni-119791 Tetraodon nigroviridis 76.92 0.00e+00 1039.00
IUUC-Tca-121391 Theobroma cacao 22.90 2.00e-13 72.00
IUUC-Tae-123628 Triticum aestivum 25.87 9.00e-14 73.60
IUUC-Tur-125959 Triticum urartu 25.87 7.00e-14 72.80
IUUC-Tbe-127847 Tupaia belangeri 87.28 0.00e+00 918.00
IUUC-Ttr-128200 Tursiops truncatus 90.40 0.00e+00 2594.00
IUUC-Vpa-130178 Vicugna pacos 93.27 0.00e+00 2031.00
IUUC-Xtr-132699 Xenopus tropicalis 82.86 0.00e+00 1793.00
IUUC-Xma-133180 Xiphophorus maculatus 75.82 0.00e+00 1415.00
Created Date 25-Jun-2017

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