iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095881

Ensembl Protein ID

PP1S37_31V6.1

UniProt Accession

A9RZ25; A9RZ25_PHYPA

Genbank Protein ID

EDQ75657.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544926

Gene Name

PHYPADRAFT_161889

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S37_31V6	PP1S37_31V6.1	PP1S37_31V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-28	98.1	16	46
UBD/Beta-Prp	1.90e-45	156.1	12	295

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDl 30
           gH+++v++l+  +d+ +++Gs+D++++vW+ 
   Q: 16   GHEEDVRGLSVsHDGVIATGSRDKSVRVWNS 46
           8**********877***************96 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl....lrslsgheaevtavkfspdgk.....ilvtgseDrtikvwdlstgkcvht 89
           ++l+gh+++v   + +  ++ ++atgsrd++++vw+  +g       ++l gh+++v +v ++p  +      lv+g+ D  + vwdl++ ++   
   Q: 12   CQLFGHEEDVRG-LSV-SHDGVIATGSRDKSVRVWNSNQGEReyilDKTLVGHTNFVGTVAWIPPNEflpggGLVSGGMDTRVLVWDLQQASIAKD 105
           899999999999.555.48889******************9999978999*************99887777789********************** PP
   S: 90   lkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvys 185
           +kgh+ +v  ++++p+g  ++s+s d+t+r w  + gq++e +l+ghdg v+ v   + +  +v+Gs D+t++lW+    +++ t +g htd v+ 
   Q: 106  MKGHKLQVSNVAVDPNG-DILSASVDSTVRRW--RDGQVVE-VLQGHDGPVQAVLPLS-NGEVVTGSSDTTMKLWRG--STCISTIRG-HTDTVRG 193
           ***************55.589***********..******9.**********998888.56789***********66..9*******9.******* PP
   S: 186  lsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlv 281
           l++ +n   ++s+s+dg+++lw l +ge + ++ ght+ v+sv+++  +  ++sgs+Dg  +iW  r g ++++++++   v+ va+  + +  lv
   Q: 194  LAMMPN-VGILSASHDGSLRLWAL-SGEQLLEFVGHTAIVYSVAAH-SSGDIASGSEDGFAKIW--RGGVCVQSIEHPG-CVWDVAF--LPNGDLV 281
           *****8.7****************.7778*****************.9999*************..9*********987.*******..889999* PP
   S: 282  lgsedskvniwklk 295
           ++ +d+ +++w  +
   Q: 282  TACSDGVARVWTRE 295
           ***********965 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MGEESPQYTL RCQLFGHEED VRGLSVSHDG VIATGSRDKS VRVWNSNQGE REYILDKTLV 60
GHTNFVGTVA WIPPNEFLPG GGLVSGGMDT RVLVWDLQQA SIAKDMKGHK LQVSNVAVDP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTCAGTCAG TGCTCGGGGA TCGTGAGTGT GTCTGCCATT GCTCGCAACC GCGACTTCGA 60
TTTCCGCCCG AGAAGTTCTC AAATCACACT CTGCTCGCCT TCTACTCCAA TTGGACCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR020472--G-protein_beta_WD-40_rep
IPR033510--PLAA/Doa1/Lub1
IPR015155--PLAA_fam_Ub-bd_PFU
IPR013535--PUL_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS51394--PFU
PS51396--PUL
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF09070--PFU
PF08324--PUL
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0043130--F:ubiquitin binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0010992--P:ubiquitin homeostasis

KEGG

ppp:PHYPADRAFT_161889

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000146	Aegilops tauschii	52.40	0.00e+00	761.00
IUUC-Aml-002125	Ailuropoda melanoleuca	32.84	1.00e-114	407.00
IUUC-Atr-002554	Amborella trichopoda	55.08	0.00e+00	836.00
IUUC-Apl-004094	Anas platyrhynchos	32.89	3.00e-103	368.00
IUUC-Aca-004726	Anolis carolinensis	33.54	8.00e-115	407.00
IUUC-Aly-005961	Arabidopsis lyrata	53.60	0.00e+00	807.00
IUUC-Ath-006639	Arabidopsis thaliana	53.34	0.00e+00	789.00
IUUC-Ago-007772	Ashbya gossypii	28.49	1.00e-68	253.00
IUUC-Acl-008316	Aspergillus clavatus	31.69	2.00e-75	276.00
IUUC-Afl-008532	Aspergillus flavus	32.12	4.00e-83	302.00
IUUC-Afu-008950	Aspergillus fumigatus	32.33	2.00e-84	306.00
IUUC-Ani-009186	Aspergillus nidulans	32.30	2.00e-90	326.00
IUUC-Ang-009575	Aspergillus niger	31.27	3.00e-79	289.00
IUUC-Aor-010086	Aspergillus oryzae	32.12	4.00e-83	302.00
IUUC-Ate-010541	Aspergillus terreus	31.21	3.00e-83	302.00
IUUC-Ame-011633	Astyanax mexicanus	34.08	7.00e-109	387.00
IUUC-Bgr-012292	Blumeria graminis	29.06	4.00e-87	315.00
IUUC-Bta-013218	Bos taurus	33.70	1.00e-116	413.00
IUUC-Bci-013876	Botrytis cinerea	32.95	5.00e-96	344.00
IUUC-Bdi-014810	Brachypodium distachyon	54.63	0.00e+00	828.00
IUUC-Bol-016006	Brassica oleracea	54.39	0.00e+00	826.00
IUUC-Bra-017593	Brassica rapa	54.26	0.00e+00	825.00
IUUC-Cel-018703	Caenorhabditis elegans	24.58	5.00e-43	168.00
IUUC-Cja-019270	Callithrix jacchus	33.75	2.00e-114	406.00
IUUC-Cfa-021262	Canis familiaris	32.68	5.00e-113	401.00
IUUC-Cpo-021449	Cavia porcellus	31.66	6.00e-100	358.00
IUUC-Csa-024140	Chlorocebus sabaeus	33.13	9.00e-114	403.00
IUUC-Cho-024923	Choloepus hoffmanni	36.40	4.00e-42	166.00
IUUC-Cin-025373	Ciona intestinalis	30.77	8.00e-92	330.00
IUUC-Csv-026324	Ciona savignyi	30.51	4.00e-87	315.00
IUUC-Cgl-026711	Colletotrichum gloeosporioides	30.01	3.00e-78	285.00
IUUC-Cne-026998	Cryptococcus neoformans	27.03	5.00e-57	215.00
IUUC-Cme-027154	Cyanidioschyzon merolae	29.21	6.00e-67	248.00
IUUC-Dre-028674	Danio rerio	33.62	9.00e-108	384.00
IUUC-Dno-028966	Dasypus novemcinctus	32.96	2.00e-114	406.00
IUUC-Dor-030343	Dipodomys ordii	30.25	6.00e-53	201.00
IUUC-Dse-031385	Dothistroma septosporum	29.83	6.00e-76	278.00
IUUC-Dme-032044	Drosophila melanogaster	30.41	6.00e-80	291.00
IUUC-Ete-032506	Echinops telfairi	29.69	1.00e-52	200.00
IUUC-Eca-033547	Equus caballus	32.84	4.00e-114	405.00
IUUC-Eeu-034462	Erinaceus europaeus	36.82	1.00e-41	164.00
IUUC-Fca-035893	Felis catus	32.47	3.00e-113	402.00
IUUC-Fal-037235	Ficedula albicollis	33.00	4.00e-115	408.00
IUUC-Fox-037836	Fusarium oxysporum	32.62	8.00e-94	337.00
IUUC-Fso-038251	Fusarium solani	31.93	7.00e-93	334.00
IUUC-Gmo-038648	Gadus morhua	35.36	1.00e-99	357.00
IUUC-Ggr-039867	Gaeumannomyces graminis	28.68	5.00e-79	288.00
IUUC-Gga-040989	Gallus gallus	33.66	4.00e-114	404.00
IUUC-Gac-041344	Gasterosteus aculeatus	32.95	1.00e-103	370.00
IUUC-Gma-043067	Glycine max	54.56	0.00e+00	834.00
IUUC-Ggo-045009	Gorilla gorilla	34.62	2.00e-91	328.00
IUUC-Hsa-046807	Homo sapiens	33.00	9.00e-113	400.00
IUUC-Itr-048636	Ictidomys tridecemlineatus	32.80	2.00e-113	402.00
IUUC-Kpa-049134	Komagataella pastoris	29.65	2.00e-71	263.00
IUUC-Lch-049597	Latimeria chalumnae	34.69	2.00e-76	278.00
IUUC-Lpe-050821	Leersia perrieri	51.37	0.00e+00	793.00
IUUC-Loc-051849	Lepisosteus oculatus	33.09	2.00e-106	379.00
IUUC-Lma-053297	Leptosphaeria maculans	33.02	2.00e-89	323.00
IUUC-Laf-053495	Loxodonta africana	33.13	1.00e-112	400.00
IUUC-Meu-055983	Macropus eugenii	37.04	3.00e-37	149.00
IUUC-Mor-057006	Magnaporthe oryzae	29.33	4.00e-80	291.00
IUUC-Mpo-057465	Magnaporthe poae	28.77	1.00e-78	287.00
IUUC-Mtr-058374	Medicago truncatula	55.53	0.00e+00	891.00
IUUC-Mla-058895	Melampsora laricipopulina	33.05	1.00e-58	219.00
IUUC-Mvi-060297	Microbotryum violaceum	32.80	1.00e-84	307.00
IUUC-Mmr-060810	Microcebus murinus	31.33	3.00e-99	355.00
IUUC-Mdo-062671	Monodelphis domestica	32.72	2.00e-112	399.00
IUUC-Mmu-063536	Mus musculus	33.17	1.00e-111	396.00
IUUC-Mac-064902	Musa acuminata	56.08	0.00e+00	856.00
IUUC-Mpu-066085	Mustela putorius furo	33.21	6.00e-115	407.00
IUUC-Mlu-067907	Myotis lucifugus	36.40	3.00e-87	315.00
IUUC-Nfi-068457	Neosartorya fischeri	31.72	2.00e-68	253.00
IUUC-Ncr-068622	Neurospora crassa	29.54	2.00e-82	300.00
IUUC-Nle-069049	Nomascus leucogenys	32.39	3.00e-108	385.00
IUUC-Opr-071013	Ochotona princeps	35.91	9.00e-27	114.00
IUUC-Ont-071339	Oreochromis niloticus	34.27	9.00e-113	400.00
IUUC-Oan-073353	Ornithorhynchus anatinus	38.26	7.00e-39	152.00
IUUC-Ocu-074625	Oryctolagus cuniculus	32.88	6.00e-113	401.00
IUUC-Oba-075226	Oryza barthii	50.07	0.00e+00	714.00
IUUC-Obr-076875	Oryza brachyantha	53.46	0.00e+00	835.00
IUUC-Ogl-077057	Oryza glaberrima	54.76	0.00e+00	827.00
IUUC-Ogu-078156	Oryza glumaepatula	54.63	0.00e+00	825.00
IUUC-Oin-079373	Oryza indica	54.76	0.00e+00	824.00
IUUC-Olo-080849	Oryza longistaminata	46.74	1.00e-165	575.00
IUUC-Ome-081654	Oryza meridionalis	50.07	0.00e+00	713.00
IUUC-Oni-082221	Oryza nivara	50.20	0.00e+00	724.00
IUUC-Opu-084103	Oryza punctata	50.59	0.00e+00	706.00
IUUC-Oru-084751	Oryza rufipogon	50.07	0.00e+00	711.00
IUUC-Osa-085584	Oryza sativa	54.50	0.00e+00	823.00
IUUC-Ola-086974	Oryzias latipes	33.79	7.00e-112	397.00
IUUC-Oga-088052	Otolemur garnettii	30.94	3.00e-101	362.00
IUUC-Oar-089509	Ovis aries	33.25	1.00e-114	406.00
IUUC-Ptr-090911	Pan troglodytes	33.00	1.00e-112	399.00
IUUC-Pan-092141	Papio anubis	33.01	2.00e-111	395.00
IUUC-Psi-093543	Pelodiscus sinensis	33.11	2.00e-102	366.00
IUUC-Pno-094952	Phaeosphaeria nodorum	31.66	1.00e-84	307.00
IUUC-Pfo-096739	Poecilia formosa	33.83	2.00e-106	379.00
IUUC-Pab-098641	Pongo abelii	33.09	3.00e-112	398.00
IUUC-Pop-099621	Populus trichocarpa	53.02	0.00e+00	802.00
IUUC-Pca-100599	Procavia capensis	29.79	1.00e-87	317.00
IUUC-Ppe-101874	Prunus persica	55.57	0.00e+00	856.00
IUUC-Pva-103009	Pteropus vampyrus	31.59	3.00e-86	312.00
IUUC-Pgr-103260	Puccinia graminis	30.56	7.00e-76	278.00
IUUC-Ptt-103711	Puccinia triticina	29.58	6.00e-74	271.00
IUUC-Pte-104337	Pyrenophora teres	32.25	6.00e-80	291.00
IUUC-Pyt-104475	Pyrenophora triticirepentis	32.25	4.00e-80	292.00
IUUC-Rno-105273	Rattus norvegicus	33.25	6.00e-113	401.00
IUUC-Sce-106351	Saccharomyces cerevisiae	28.71	6.00e-59	221.00
IUUC-Sha-106758	Sarcophilus harrisii	32.47	2.00e-111	395.00
IUUC-Sja-107687	Schizosaccharomyces japonicus	29.35	2.00e-81	296.00
IUUC-Spo-108093	Schizosaccharomyces pombe	31.86	3.00e-93	335.00
IUUC-Ssl-108623	Sclerotinia sclerotiorum	31.22	1.00e-86	313.00
IUUC-Smo-109368	Selaginella moellendorffii	54.64	0.00e+00	837.00
IUUC-Sit-109699	Setaria italica	54.64	0.00e+00	850.00
IUUC-Sly-111063	Solanum lycopersicum	53.12	0.00e+00	791.00
IUUC-Sar-113199	Sorex araneus	36.59	7.00e-72	264.00
IUUC-Sbi-114745	Sorghum bicolor	52.68	0.00e+00	811.00
IUUC-Sre-115080	Sporisorium reilianum	36.24	2.00e-75	276.00
IUUC-Ssc-115666	Sus scrofa	32.93	3.00e-112	398.00
IUUC-Tgu-116877	Taeniopygia guttata	32.76	2.00e-114	406.00
IUUC-Tru-117580	Takifugu rubripes	33.80	2.00e-108	385.00
IUUC-Tsy-118946	Tarsius syrichta	32.50	9.00e-103	367.00
IUUC-Tni-119755	Tetraodon nigroviridis	33.12	7.00e-104	370.00
IUUC-Tca-120977	Theobroma cacao	54.76	0.00e+00	843.00
IUUC-Tre-122217	Trichoderma reesei	31.42	1.00e-94	340.00
IUUC-Tvi-122671	Trichoderma virens	31.03	5.00e-91	328.00
IUUC-Tae-125266	Triticum aestivum	54.24	0.00e+00	842.00
IUUC-Tur-126404	Triticum urartu	38.73	7.00e-66	244.00
IUUC-Tme-126971	Tuber melanosporum	34.62	7.00e-113	400.00
IUUC-Tbe-127858	Tupaia belangeri	26.71	2.00e-29	123.00
IUUC-Ttr-128173	Tursiops truncatus	32.96	3.00e-113	401.00
IUUC-Uma-129322	Ustilago maydis	31.11	6.00e-81	294.00
IUUC-Vda-129682	Verticillium dahliae	30.95	4.00e-89	322.00
IUUC-Vpa-130607	Vicugna pacos	32.45	2.00e-103	369.00
IUUC-Vvi-131153	Vitis vinifera	54.22	0.00e+00	842.00
IUUC-Xtr-132208	Xenopus tropicalis	33.58	9.00e-114	404.00
IUUC-Xma-133098	Xiphophorus maculatus	33.67	2.00e-106	379.00
IUUC-Yli-134646	Yarrowia lipolytica	34.99	2.00e-74	272.00
IUUC-Zma-135920	Zea mays	49.38	0.00e+00	779.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence