iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-113920

Ensembl Protein ID

Sb03g013260.1

UniProt Accession

C5XIY6; C5XIY6_SORBI

Genbank Protein ID

EES02888.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G152600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g013260	Sb03g013260.1	Sb03g013260.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	2.30e-41	140.8	1	76
ULD/UDP/UBQ/UBQ_PIM	6.10e-28	97.4	1	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k+++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K+ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
           99********************************************************************986 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN 60
IQKESTLHLV LRLRGGAKKR KKKTYTKPKK IKHKHKKVKL AVLQFYKVDD ATGKVTRLRK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTCGCCGCC CACACACACA TCCCCCACCA TCCCCGCCGC CGCAGGCGAG AAACCTCAGG 60
TAAGGGCGGG CGGCAGCCGC CGGAGCCGGG CGCGCCTGCC AAGATGCAGA TCTTCGTGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002906--Ribosomal_S27a
IPR011332--Ribosomal_zn-bd
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF01599--Ribosomal_S27
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM01402--Ribosomal_S27
SM00213--UBQ

Gene Ontology

GO:0005840--C:ribosome
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

KEGG

sbi:SORBI_03g013260

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001873	Ailuropoda melanoleuca	85.62	4.00e-57	212.00
IUUC-Apl-003364	Anas platyrhynchos	76.82	2.00e-49	187.00
IUUC-Aca-005055	Anolis carolinensis	84.97	1.00e-62	231.00
IUUC-Aly-005675	Arabidopsis lyrata	92.90	1.00e-66	244.00
IUUC-Ath-006984	Arabidopsis thaliana	92.90	1.00e-66	244.00
IUUC-Acl-008099	Aspergillus clavatus	82.35	5.00e-53	199.00
IUUC-Afl-008474	Aspergillus flavus	83.01	7.00e-53	198.00
IUUC-Ani-009265	Aspergillus nidulans	82.35	2.00e-52	197.00
IUUC-Aor-009936	Aspergillus oryzae	83.01	7.00e-53	198.00
IUUC-Ame-011421	Astyanax mexicanus	85.62	3.00e-56	209.00
IUUC-Bta-012585	Bos taurus	85.62	4.00e-57	212.00
IUUC-Bdi-014571	Brachypodium distachyon	98.06	5.00e-67	245.00
IUUC-Bol-015420	Brassica oleracea	92.90	1.00e-66	244.00
IUUC-Cja-019786	Callithrix jacchus	85.62	4.00e-57	212.00
IUUC-Cfa-020795	Canis familiaris	85.62	4.00e-57	212.00
IUUC-Cpo-021905	Cavia porcellus	84.52	1.00e-55	207.00
IUUC-Csa-023120	Chlorocebus sabaeus	85.62	4.00e-57	212.00
IUUC-Csv-026028	Ciona savignyi	76.77	1.00e-52	197.00
IUUC-Dre-028206	Danio rerio	85.62	3.00e-56	209.00
IUUC-Dno-029073	Dasypus novemcinctus	85.62	4.00e-57	213.00
IUUC-Ete-032297	Echinops telfairi	59.48	1.00e-46	177.00
IUUC-Eca-034346	Equus caballus	85.62	3.00e-57	213.00
IUUC-Fca-035555	Felis catus	85.62	4.00e-57	212.00
IUUC-Fox-037994	Fusarium oxysporum	82.58	5.00e-58	215.00
IUUC-Fso-038121	Fusarium solani	83.12	2.00e-59	219.00
IUUC-Gmo-039231	Gadus morhua	85.62	4.00e-56	209.00
IUUC-Gma-043007	Glycine max	95.42	4.00e-68	248.00
IUUC-Ggo-044980	Gorilla gorilla	85.62	4.00e-57	212.00
IUUC-Hsa-046329	Homo sapiens	85.62	4.00e-57	212.00
IUUC-Itr-047994	Ictidomys tridecemlineatus	85.62	4.00e-57	212.00
IUUC-Loc-052020	Lepisosteus oculatus	85.62	5.00e-56	209.00
IUUC-Laf-054502	Loxodonta africana	81.56	2.00e-46	177.00
IUUC-Mcc-055895	Macaca mulatta	85.62	4.00e-57	212.00
IUUC-Meu-056529	Macropus eugenii	85.62	4.00e-57	212.00
IUUC-Mtr-058225	Medicago truncatula	95.42	3.00e-68	249.00
IUUC-Mla-058871	Melampsora laricipopulina	85.43	3.00e-60	223.00
IUUC-Mvi-060484	Microbotryum violaceum	82.89	3.00e-59	220.00
IUUC-Mmr-060694	Microcebus murinus	85.62	4.00e-57	212.00
IUUC-Mmu-064336	Mus musculus	84.97	2.00e-56	210.00
IUUC-Mac-064616	Musa acuminata	97.39	3.00e-71	259.00
IUUC-Mpu-066613	Mustela putorius furo	85.62	4.00e-57	212.00
IUUC-Mlu-067676	Myotis lucifugus	85.62	4.00e-57	212.00
IUUC-Opr-070523	Ochotona princeps	84.21	5.00e-54	202.00
IUUC-Ont-071636	Oreochromis niloticus	85.62	3.00e-56	209.00
IUUC-Oan-073638	Ornithorhynchus anatinus	85.62	3.00e-57	213.00
IUUC-Ocu-074497	Oryctolagus cuniculus	85.62	4.00e-57	212.00
IUUC-Oba-075488	Oryza barthii	98.71	2.00e-67	246.00
IUUC-Obr-076443	Oryza brachyantha	98.71	2.00e-67	246.00
IUUC-Ogl-077000	Oryza glaberrima	98.71	2.00e-67	246.00
IUUC-Oin-080161	Oryza indica	98.71	2.00e-67	246.00
IUUC-Olo-080936	Oryza longistaminata	98.21	1.00e-30	122.00
IUUC-Ome-081322	Oryza meridionalis	98.71	2.00e-67	246.00
IUUC-Oru-085032	Oryza rufipogon	98.71	2.00e-67	246.00
IUUC-Osa-085398	Oryza sativa	98.71	2.00e-67	246.00
IUUC-Ola-086383	Oryzias latipes	85.62	2.00e-56	210.00
IUUC-Oar-090107	Ovis aries	85.62	5.00e-57	212.00
IUUC-Ptr-090693	Pan troglodytes	85.62	4.00e-57	212.00
IUUC-Pan-092065	Papio anubis	85.62	4.00e-57	212.00
IUUC-Psi-093901	Pelodiscus sinensis	83.94	5.00e-48	182.00
IUUC-Pma-094647	Petromyzon marinus	83.19	5.00e-37	145.00
IUUC-Pfo-097442	Poecilia formosa	85.62	3.00e-56	209.00
IUUC-Pab-098246	Pongo abelii	72.55	4.00e-55	206.00
IUUC-Pop-099203	Populus trichocarpa	96.69	4.00e-68	249.00
IUUC-Ppe-101784	Prunus persica	95.42	4.00e-68	249.00
IUUC-Pyt-104464	Pyrenophora triticirepentis	82.35	4.00e-58	216.00
IUUC-Rno-105805	Rattus norvegicus	84.97	2.00e-56	210.00
IUUC-Sce-106232	Saccharomyces cerevisiae	85.53	2.00e-52	197.00
IUUC-Sha-106772	Sarcophilus harrisii	85.62	5.00e-57	212.00
IUUC-Sit-110054	Setaria italica	99.35	2.00e-73	266.00
IUUC-Sly-111074	Solanum lycopersicum	96.08	7.00e-68	248.00
IUUC-Stu-112439	Solanum tuberosum	96.73	4.00e-69	252.00
IUUC-Ssc-115514	Sus scrofa	85.62	4.00e-57	212.00
IUUC-Tru-118475	Takifugu rubripes	85.62	4.00e-56	209.00
IUUC-Tni-119751	Tetraodon nigroviridis	82.48	5.00e-46	175.00
IUUC-Tca-121126	Theobroma cacao	95.42	4.00e-68	249.00
IUUC-Tre-122027	Trichoderma reesei	81.82	6.00e-58	215.00
IUUC-Tvi-122659	Trichoderma virens	81.82	6.00e-58	215.00
IUUC-Tae-124683	Triticum aestivum	98.06	5.00e-67	245.00
IUUC-Ttr-128453	Tursiops truncatus	85.62	4.00e-57	212.00
IUUC-Vpa-130119	Vicugna pacos	67.32	9.00e-36	141.00
IUUC-Vvi-131376	Vitis vinifera	95.42	2.00e-68	250.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence