iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049940

Ensembl Protein ID

ENSLACP00000006314.1

UniProt Accession

H3A9J3; H3A9J3_LATCH

Genbank Protein ID

ENSLACP00000006314

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01186107

Gene Name

RHOBTB1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000005603.1	ENSLACT00000006367.1	ENSLACP00000006314.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB	7.40e-27	93.7	266	424

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_Other: BTB

   S: 1    aDvilvvggeeffahkivLaasSsvFyalflmelees.................................................... 37
           aDv++ +++ ++fah i+La+sSs+Fy+lflm+l+e                                                     
   Q: 266  ADVMFLLKDIQIFAHIIYLATSSSKFYDLFLMDLSEEfqdtdekmkksgkdlpvrtfsldtdedigegtarnshfslrtyksvgflkmi 354
           79*********************************999*************************************************** PP
   S: 38   ...................................ksklmveik.d..vqpevfrallkFlYtgkldene 69
                                              ++++m ++k d  vqp++f a+lkFlY+g+lde+e
   Q: 355  dheneepvvqgkelslwcklfgsihkeivanpvmqRKRPMSVVKvDhsVQPGPFLAVLKFLYSGQLDESE 424
           ***********************************5588888888779*******************987 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MDTDMDYERP NVETIKCVVV GDNAVGKTRL ICSRACNSTF TQYQLLSTHV PTVWAIDQYR 60
VCQEVLERSR DVVDEVSVSL RLWDTFGDHH KDRRFAYGRS DVVVLCFSIA NPNSLNHVKT 120

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Nucleotide Sequence
(Fasta)

TGGGAGGAGT CCCATTGCTA ATTTGAACTG GACGATTCAT GCAAGTTTCT GCGGTGCCCT 60
CCCTTTCTAT TAACGTCTTC TAGGAAAGGT AAGGCAATTT TCCTTGAATT CCAGCTCTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0342--GTP-binding
KW-0472--Membrane
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR000210--BTB/POZ_dom
IPR027417--P-loop_NTPase
IPR011333--SKP1/BTB/POZ
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR003578--Small_GTPase_Rho

PROSITE

PS50097--BTB
PS51420--RHO

Pfam

PF00071--Ras

SMART

SM00225--BTB

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0007264--P:small GTPase mediated signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cin-025684	Ciona intestinalis	34.06	5.00e-84	305.00
IUUC-Csv-026261	Ciona savignyi	55.42	2.00e-49	187.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence