iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oga-088991

Ensembl Protein ID

ENSOGAP00000010032.2

UniProt Accession

H0X4B9; H0X4B9_OTOGA

Genbank Protein ID

ENSOGAP00000010032

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03061658

Gene Name

RRP9

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000011204.2	ENSOGAT00000011208.2	ENSOGAP00000010032.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-29	100.9	324	358
UBD/Beta-Prp	1.90e-41	142.2	147	408

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgv 34
           gH++s+ c+++ ++ ++vsG+dDg++ +W l++ +
   Q: 324  GHQGSIDCIHLiNEEHMVSGADDGSVALWGLSKKR 358
           8*********9999***************987665 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkl...........lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkc 86
           h+  itc+ ++pd+  ++++ +d +i+ w+v++g +             +  gh++ v ++ +s+dgk+l++g + ++i +w+ +++  
   Q: 147  HQLSITCLVITPDDLAIFSAAKDCSIIKWSVESGRKlhviprakkgaDGQSPGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCRH 235
           6778999999**************************888888877766666778888******************************** PP
   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl 175
           ++t++gh d v  l+f + ++ l s+shdr ++vw++ +++ +e tl gh+++v  +   + ++++ +G+ D+tvr+W+++ ++ l   
   Q: 236  LYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVE-TLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKIPEESQLVFY 323
           ******************99***********************9.***********************************999988765 PP
   S: 176  tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght...........dnvksvrfspnderlvsgssDgsiriWdlr 252
            g h++s+ ++ +  + +++vsg++dg+v lw l++++ +  +++              +v+sv+++ n++++++gs+  s+r+W + 
   Q: 324  -G-HQGSIDCIHLINE-EHMVSGADDGSVALWGLSKKRPLALQREAHglrgepgleqpFWVSSVAALLNTDLVATGSHSSSVRLWQCG 408
           .6.*********8886.7*****************999977776655588999999999**************************875 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

TGTMSATAAP RKRGKSASAA GAGANKRRRK ADSAGDRGKS KGGGKMNEEI SSDSETESLA 60
PRRTEEEEEE QELEETAQEK KLRLAKLYLE QLRQQEEEKA EAHAFEEDQV AGRLKEDVLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTGGCACCA TGTCTGCAAC CGCAGCACCT CGTAAGCGGG GAAAGTCGGC CTCCGCGGCT 60
GGTGCAGGGG CCAACAAGCG GCGGAGAAAG GTGAGCTTGG CCCTTCCACG GGCCGCGGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031428--C:box C/D snoRNP complex
GO:0034511--F:U3 snoRNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000586	Aegilops tauschii	33.25	5.00e-54	205.00
IUUC-Aml-002072	Ailuropoda melanoleuca	92.10	0.00e+00	766.00
IUUC-Atr-002824	Amborella trichopoda	38.54	1.00e-68	253.00
IUUC-Apl-003264	Anas platyrhynchos	76.00	2.00e-169	587.00
IUUC-Aca-004898	Anolis carolinensis	77.95	6.00e-179	620.00
IUUC-Aly-005535	Arabidopsis lyrata	37.43	2.00e-64	240.00
IUUC-Ath-007119	Arabidopsis thaliana	36.44	3.00e-68	252.00
IUUC-Ago-007710	Ashbya gossypii	28.00	1.00e-55	210.00
IUUC-Acl-008345	Aspergillus clavatus	32.66	3.00e-54	206.00
IUUC-Afl-008718	Aspergillus flavus	31.39	3.00e-52	199.00
IUUC-Afu-008966	Aspergillus fumigatus	29.98	6.00e-53	202.00
IUUC-Ani-009214	Aspergillus nidulans	31.76	4.00e-56	212.00
IUUC-Ang-009774	Aspergillus niger	33.08	1.00e-55	211.00
IUUC-Aor-009956	Aspergillus oryzae	31.39	3.00e-52	199.00
IUUC-Ate-010449	Aspergillus terreus	30.02	3.00e-54	206.00
IUUC-Ame-011860	Astyanax mexicanus	71.21	2.00e-167	582.00
IUUC-Bgr-012213	Blumeria graminis	31.55	5.00e-62	232.00
IUUC-Bta-012698	Bos taurus	94.22	0.00e+00	726.00
IUUC-Bci-013973	Botrytis cinerea	28.72	1.00e-59	224.00
IUUC-Bdi-014790	Brachypodium distachyon	36.13	1.00e-60	227.00
IUUC-Bol-016068	Brassica oleracea	38.62	7.00e-65	241.00
IUUC-Bra-017410	Brassica rapa	38.62	1.00e-60	227.00
IUUC-Cel-018616	Caenorhabditis elegans	36.94	3.00e-72	266.00
IUUC-Cja-019532	Callithrix jacchus	89.50	0.00e+00	742.00
IUUC-Cfa-020961	Canis familiaris	86.57	0.00e+00	728.00
IUUC-Cpo-021527	Cavia porcellus	90.99	0.00e+00	749.00
IUUC-Csa-023106	Chlorocebus sabaeus	94.34	0.00e+00	764.00
IUUC-Cin-025670	Ciona intestinalis	51.79	7.00e-121	427.00
IUUC-Csv-026172	Ciona savignyi	50.90	3.00e-114	404.00
IUUC-Cgl-026619	Colletotrichum gloeosporioides	32.33	5.00e-62	232.00
IUUC-Cne-027070	Cryptococcus neoformans	29.09	6.00e-46	178.00
IUUC-Cme-027125	Cyanidioschyzon merolae	25.86	3.00e-33	136.00
IUUC-Dre-027919	Danio rerio	68.48	3.00e-161	561.00
IUUC-Dno-029684	Dasypus novemcinctus	92.70	5.00e-168	583.00
IUUC-Dor-030363	Dipodomys ordii	87.68	9.00e-107	380.00
IUUC-Dse-031503	Dothistroma septosporum	32.00	1.00e-59	224.00
IUUC-Dme-031979	Drosophila melanogaster	44.25	2.00e-96	345.00
IUUC-Eca-033735	Equus caballus	93.53	0.00e+00	726.00
IUUC-Fca-036193	Felis catus	91.96	0.00e+00	734.00
IUUC-Fal-037058	Ficedula albicollis	71.54	5.00e-169	587.00
IUUC-Fox-038036	Fusarium oxysporum	31.96	5.00e-64	238.00
IUUC-Fso-038298	Fusarium solani	32.75	2.00e-63	236.00
IUUC-Gmo-038796	Gadus morhua	64.56	5.00e-140	490.00
IUUC-Ggr-040074	Gaeumannomyces graminis	30.50	5.00e-53	202.00
IUUC-Gga-040743	Gallus gallus	77.54	4.00e-136	477.00
IUUC-Gac-042583	Gasterosteus aculeatus	58.20	4.00e-167	581.00
IUUC-Gma-042659	Glycine max	39.29	2.00e-79	289.00
IUUC-Ggo-045543	Gorilla gorilla	90.76	0.00e+00	761.00
IUUC-Hsa-047017	Homo sapiens	94.34	0.00e+00	764.00
IUUC-Hvu-047173	Hordeum vulgare	37.17	6.00e-67	248.00
IUUC-Itr-048062	Ictidomys tridecemlineatus	86.34	0.00e+00	759.00
IUUC-Kpa-049262	Komagataella pastoris	32.44	1.00e-58	220.00
IUUC-Lch-050566	Latimeria chalumnae	72.28	6.00e-153	533.00
IUUC-Lpe-051651	Leersia perrieri	35.15	8.00e-65	241.00
IUUC-Loc-051997	Lepisosteus oculatus	68.83	5.00e-168	583.00
IUUC-Lma-053182	Leptosphaeria maculans	29.75	2.00e-58	219.00
IUUC-Laf-054105	Loxodonta africana	92.47	0.00e+00	712.00
IUUC-Mcc-055215	Macaca mulatta	94.34	0.00e+00	765.00
IUUC-Meu-055943	Macropus eugenii	81.91	0.00e+00	655.00
IUUC-Mor-057069	Magnaporthe oryzae	32.18	5.00e-63	235.00
IUUC-Mpo-057358	Magnaporthe poae	30.90	1.00e-50	194.00
IUUC-Mtr-058209	Medicago truncatula	38.60	7.00e-78	284.00
IUUC-Mla-059043	Melampsora laricipopulina	27.95	5.00e-47	182.00
IUUC-Mga-060024	Meleagris gallopavo	74.40	1.00e-154	538.00
IUUC-Mvi-060371	Microbotryum violaceum	32.54	3.00e-67	249.00
IUUC-Mmr-061403	Microcebus murinus	96.41	0.00e+00	743.00
IUUC-Mdo-063026	Monodelphis domestica	74.42	0.00e+00	671.00
IUUC-Mmu-063646	Mus musculus	93.05	0.00e+00	762.00
IUUC-Mac-065149	Musa acuminata	38.52	1.00e-75	277.00
IUUC-Mpu-065760	Mustela putorius furo	91.35	0.00e+00	760.00
IUUC-Mlu-067963	Myotis lucifugus	94.24	0.00e+00	740.00
IUUC-Nfi-068288	Neosartorya fischeri	32.21	1.00e-56	214.00
IUUC-Ncr-068679	Neurospora crassa	32.43	2.00e-55	209.00
IUUC-Nle-069766	Nomascus leucogenys	83.44	0.00e+00	682.00
IUUC-Opr-070906	Ochotona princeps	92.83	0.00e+00	760.00
IUUC-Ont-071661	Oreochromis niloticus	66.07	7.00e-168	583.00
IUUC-Oan-073465	Ornithorhynchus anatinus	66.11	3.00e-147	514.00
IUUC-Ocu-074263	Oryctolagus cuniculus	92.47	0.00e+00	760.00
IUUC-Oba-075607	Oryza barthii	37.33	7.00e-60	224.00
IUUC-Ogl-077387	Oryza glaberrima	36.77	1.00e-63	237.00
IUUC-Ogu-078323	Oryza glumaepatula	37.60	8.00e-64	238.00
IUUC-Oin-079977	Oryza indica	31.83	6.00e-42	165.00
IUUC-Olo-080857	Oryza longistaminata	37.50	6.00e-64	238.00
IUUC-Ome-081568	Oryza meridionalis	37.50	2.00e-63	236.00
IUUC-Oni-082685	Oryza nivara	37.60	4.00e-67	248.00
IUUC-Opu-084049	Oryza punctata	37.33	9.00e-64	237.00
IUUC-Oru-084348	Oryza rufipogon	37.60	4.00e-67	248.00
IUUC-Osa-086076	Oryza sativa	37.60	4.00e-67	248.00
IUUC-Ola-086991	Oryzias latipes	67.45	1.00e-163	569.00
IUUC-Olu-087891	Ostreococcus lucimarinus	36.03	8.00e-63	234.00
IUUC-Oar-090430	Ovis aries	91.44	0.00e+00	719.00
IUUC-Ptr-091359	Pan troglodytes	94.12	0.00e+00	763.00
IUUC-Pan-092499	Papio anubis	94.12	0.00e+00	763.00
IUUC-Pma-094447	Petromyzon marinus	60.47	2.00e-125	442.00
IUUC-Pno-095008	Phaeosphaeria nodorum	30.43	2.00e-62	233.00
IUUC-Ppa-095680	Physcomitrella patens	38.44	2.00e-76	279.00
IUUC-Pfo-096430	Poecilia formosa	66.30	8.00e-168	583.00
IUUC-Pab-097649	Pongo abelii	93.89	0.00e+00	759.00
IUUC-Pop-100055	Populus trichocarpa	39.21	3.00e-76	279.00
IUUC-Pca-100317	Procavia capensis	75.17	1.00e-132	466.00
IUUC-Ppe-101999	Prunus persica	37.24	1.00e-77	284.00
IUUC-Pva-103046	Pteropus vampyrus	93.47	0.00e+00	741.00
IUUC-Pgr-103655	Puccinia graminis	30.47	4.00e-52	199.00
IUUC-Ptt-103812	Puccinia triticina	31.38	1.00e-46	181.00
IUUC-Pte-104243	Pyrenophora teres	29.53	3.00e-56	213.00
IUUC-Pyt-104512	Pyrenophora triticirepentis	30.10	5.00e-59	222.00
IUUC-Rno-104973	Rattus norvegicus	92.26	0.00e+00	741.00
IUUC-Sce-106329	Saccharomyces cerevisiae	25.90	2.00e-51	196.00
IUUC-Sha-106941	Sarcophilus harrisii	85.61	0.00e+00	676.00
IUUC-Sja-107821	Schizosaccharomyces japonicus	32.13	7.00e-62	231.00
IUUC-Spo-108329	Schizosaccharomyces pombe	35.64	3.00e-71	262.00
IUUC-Ssl-108552	Sclerotinia sclerotiorum	29.13	2.00e-59	223.00
IUUC-Smo-109198	Selaginella moellendorffii	37.80	5.00e-62	231.00
IUUC-Sit-109694	Setaria italica	36.23	4.00e-70	258.00
IUUC-Sly-111294	Solanum lycopersicum	38.38	2.00e-78	286.00
IUUC-Stu-112747	Solanum tuberosum	38.89	8.00e-80	290.00
IUUC-Sar-113315	Sorex araneus	71.95	2.00e-75	276.00
IUUC-Sbi-114694	Sorghum bicolor	35.46	6.00e-69	254.00
IUUC-Sre-114937	Sporisorium reilianum	28.89	3.00e-63	236.00
IUUC-Ssc-116127	Sus scrofa	94.72	0.00e+00	734.00
IUUC-Tgu-117242	Taeniopygia guttata	69.84	2.00e-107	381.00
IUUC-Tru-118285	Takifugu rubripes	67.26	1.00e-166	579.00
IUUC-Tni-120368	Tetraodon nigroviridis	67.01	4.00e-160	557.00
IUUC-Tca-121724	Theobroma cacao	36.29	4.00e-70	258.00
IUUC-Tre-122106	Trichoderma reesei	33.12	3.00e-67	249.00
IUUC-Tvi-122526	Trichoderma virens	32.46	3.00e-67	249.00
IUUC-Tae-122939	Triticum aestivum	36.65	1.00e-65	244.00
IUUC-Tur-126548	Triticum urartu	36.65	1.00e-65	243.00
IUUC-Tme-126985	Tuber melanosporum	34.73	1.00e-63	237.00
IUUC-Tbe-127923	Tupaia belangeri	92.69	0.00e+00	737.00
IUUC-Ttr-129308	Tursiops truncatus	89.46	0.00e+00	677.00
IUUC-Uma-129472	Ustilago maydis	30.43	5.00e-58	219.00
IUUC-Vda-129910	Verticillium dahliae	31.77	3.00e-63	236.00
IUUC-Vvi-131683	Vitis vinifera	39.22	3.00e-84	305.00
IUUC-Xtr-132118	Xenopus tropicalis	61.59	8.00e-158	550.00
IUUC-Xma-133804	Xiphophorus maculatus	65.85	7.00e-166	577.00
IUUC-Yli-134639	Yarrowia lipolytica	32.85	9.00e-61	227.00
IUUC-Zma-135884	Zea mays	36.10	9.00e-70	257.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence