iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111673

Ensembl Protein ID

Solyc09g090660.2.1

UniProt Accession

K4CW92; K4CW92_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc09g090660.2	Solyc09g090660.2.1	Solyc09g090660.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.20e-17	62.2	2	68
E3 adaptor/Cullin RING/DCX/DWD	2.00e-26	91.6	262	292
UBD/Beta-Prp	2.20e-49	169.0	219	432

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 7    lCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +C+Is+e+++dPvv++ sG  ++++ Ie++++++gk cP+t++plt +d++P +t + +  + +++ s
   Q: 2    NCSISGEVPEDPVVSKkSGLLFEKRLIERHISDYGK-CPITGEPLTADDIIPVKTGKIVKPRPVQAAS 68
           7***********************************.*********************9998887765 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+ +vt+++f  +  l+vsGs D+t++vW 
   Q: 262  GHSKRVTSVKFaAEgELVVSGSADKTVRVWQ 292
           8***********5559**************6 PP

UBD/Beta-Prp

   S: 49   sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee..tlsghd 137
           + +++++ +++++  ++i++tg+ D ++ v+d  +g++++tl+gh+++v+s++f ++g+ +vsGs+d+t+rvw+ +++  +    +l+ h+
   Q: 219  KTNKPGILSLDIHYAKDIIATGGVDSNAVVFDRPSGQIISTLSGHSKRVTSVKFAAEGELVVSGSADKTVRVWQSSENGNYDCrhVLKDHT 309
           678999******************************************************************9877654443244****** PP
   S: 138  gvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl.tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvks 227
           + v+ v+vh ++n++v++slD+t  ++dl++g +l++       +  +s +f+++g  l +g   + vk+wd++++  v ++ gh   v+ 
   Q: 310  AEVQAVTVHATNNYFVTASLDSTWCFYDLASGLCLTQVaDASESEGYTSAAFHPDGLILGTGTSGSLVKIWDVKSQANVAKFDGHVGSVTA 400
           **************************************6333566677888**************************************** PP
   S: 228  vrfspnderlvsgssDgsiriWdlrsgdllktl 260
           + fs+n+ +l+++++Dg +++Wdlr+ ++ kt+
   Q: 401  ISFSENGYFLATAAHDG-VKLWDLRKLKNFKTF 432
           ****9999999998665.8********999998 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MNCSISGEVP EDPVVSKKSG LLFEKRLIER HISDYGKCPI TGEPLTADDI IPVKTGKIVK 60
PRPVQAASIP GMLGMFQIEW DGLMLSNFAL EQQLHTARQE LSHALYQHDA ACRVIARLKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTGTT CAAGTAAGCT TCACTTTCTC TCTCTATATC GCTATTTACT TTTTTTTTCT 60
CTATGCACAT TTTTCGTAAT ATAGATCTTT TTTTTTGCGT CTCTGATCTG TAGTTTTCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR013915--Pre-mRNA_splic_Prp19
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08606--Prp19
PF04564--U-box
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0000974--C:Prp19 complex
GO:0071006--C:U2-type catalytic step 1 spliceosome
GO:0004842--F:ubiquitin-protein transferase activity
GO:0000349--P:generation of catalytic spliceosome for first transesterification step

KEGG

sly:101263464

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000488	Aegilops tauschii	69.13	0.00e+00	754.00
IUUC-Aml-001230	Ailuropoda melanoleuca	45.60	8.00e-110	389.00
IUUC-Atr-002594	Amborella trichopoda	74.95	0.00e+00	818.00
IUUC-Apl-003686	Anas platyrhynchos	42.14	4.00e-83	301.00
IUUC-Aca-005272	Anolis carolinensis	44.96	5.00e-114	403.00
IUUC-Aly-005586	Arabidopsis lyrata	75.82	0.00e+00	834.00
IUUC-Ath-007693	Arabidopsis thaliana	74.52	0.00e+00	812.00
IUUC-Ago-007879	Ashbya gossypii	42.76	2.00e-24	106.00
IUUC-Acl-008335	Aspergillus clavatus	34.43	7.00e-61	227.00
IUUC-Afl-008527	Aspergillus flavus	34.62	1.00e-65	243.00
IUUC-Afu-008957	Aspergillus fumigatus	35.07	2.00e-68	252.00
IUUC-Ani-009280	Aspergillus nidulans	35.40	1.00e-64	239.00
IUUC-Ang-009746	Aspergillus niger	34.03	8.00e-66	243.00
IUUC-Aor-009905	Aspergillus oryzae	34.43	8.00e-68	250.00
IUUC-Ate-010412	Aspergillus terreus	36.27	6.00e-63	234.00
IUUC-Ame-011561	Astyanax mexicanus	42.49	5.00e-39	154.00
IUUC-Bgr-012283	Blumeria graminis	31.13	3.00e-50	191.00
IUUC-Bta-013242	Bos taurus	45.54	5.00e-114	404.00
IUUC-Bci-013901	Botrytis cinerea	32.95	1.00e-64	239.00
IUUC-Bdi-014277	Brachypodium distachyon	75.24	0.00e+00	834.00
IUUC-Bol-016207	Brassica oleracea	74.52	0.00e+00	821.00
IUUC-Bra-017650	Brassica rapa	74.52	0.00e+00	818.00
IUUC-Cel-018271	Caenorhabditis elegans	39.07	4.00e-100	357.00
IUUC-Cja-019879	Callithrix jacchus	45.26	6.00e-112	397.00
IUUC-Cfa-020175	Canis familiaris	45.74	2.00e-114	405.00
IUUC-Cpo-022379	Cavia porcellus	45.35	1.00e-113	402.00
IUUC-Cre-022993	Chlamydomonas reinhardtii	48.07	3.00e-135	474.00
IUUC-Csa-023500	Chlorocebus sabaeus	45.35	1.00e-113	402.00
IUUC-Cho-025065	Choloepus hoffmanni	35.99	3.00e-39	154.00
IUUC-Cin-025699	Ciona intestinalis	46.35	4.00e-101	360.00
IUUC-Csv-026128	Ciona savignyi	44.76	3.00e-114	404.00
IUUC-Cgl-026507	Colletotrichum gloeosporioides	32.88	4.00e-64	238.00
IUUC-Cne-026860	Cryptococcus neoformans	38.51	7.00e-93	333.00
IUUC-Dre-028187	Danio rerio	45.35	7.00e-113	400.00
IUUC-Dno-029453	Dasypus novemcinctus	45.35	2.00e-113	401.00
IUUC-Dor-030150	Dipodomys ordii	42.51	5.00e-37	148.00
IUUC-Dse-031220	Dothistroma septosporum	32.22	6.00e-60	224.00
IUUC-Dme-031906	Drosophila melanogaster	44.57	3.00e-109	388.00
IUUC-Ete-033035	Echinops telfairi	46.22	3.00e-57	215.00
IUUC-Eca-033478	Equus caballus	45.54	9.00e-114	403.00
IUUC-Eeu-034974	Erinaceus europaeus	46.39	4.00e-77	281.00
IUUC-Fca-036194	Felis catus	45.24	4.00e-113	400.00
IUUC-Fal-037417	Ficedula albicollis	45.35	2.00e-114	405.00
IUUC-Fox-037922	Fusarium oxysporum	33.33	2.00e-62	232.00
IUUC-Fso-038256	Fusarium solani	32.17	2.00e-65	242.00
IUUC-Gmo-038713	Gadus morhua	44.96	9.00e-115	406.00
IUUC-Ggr-039854	Gaeumannomyces graminis	32.83	3.00e-54	205.00
IUUC-Gga-041143	Gallus gallus	45.35	2.00e-114	405.00
IUUC-Gac-042129	Gasterosteus aculeatus	44.38	1.00e-113	402.00
IUUC-Gma-043635	Glycine max	81.92	0.00e+00	896.00
IUUC-Ggo-045262	Gorilla gorilla	45.35	1.00e-113	402.00
IUUC-Hsa-046036	Homo sapiens	45.35	1.00e-113	402.00
IUUC-Hvu-047442	Hordeum vulgare	70.83	2.00e-135	474.00
IUUC-Itr-048169	Ictidomys tridecemlineatus	44.96	1.00e-112	399.00
IUUC-Kpa-049195	Komagataella pastoris	45.67	3.00e-19	89.00
IUUC-Lch-050105	Latimeria chalumnae	45.02	9.00e-112	396.00
IUUC-Lpe-050976	Leersia perrieri	74.86	0.00e+00	826.00
IUUC-Loc-052042	Lepisosteus oculatus	40.82	3.00e-77	281.00
IUUC-Lma-053143	Leptosphaeria maculans	32.56	4.00e-62	232.00
IUUC-Laf-053451	Loxodonta africana	44.28	5.00e-111	394.00
IUUC-Mcc-055786	Macaca mulatta	45.35	1.00e-113	402.00
IUUC-Meu-056161	Macropus eugenii	41.81	4.00e-47	181.00
IUUC-Mor-057215	Magnaporthe oryzae	33.08	7.00e-59	220.00
IUUC-Mpo-057419	Magnaporthe poae	31.79	2.00e-49	189.00
IUUC-Mtr-057756	Medicago truncatula	76.16	0.00e+00	843.00
IUUC-Mla-059085	Melampsora laricipopulina	35.19	5.00e-77	281.00
IUUC-Mga-060158	Meleagris gallopavo	44.47	1.00e-100	359.00
IUUC-Mvi-060441	Microbotryum violaceum	34.91	1.00e-69	256.00
IUUC-Mmr-061085	Microcebus murinus	45.35	1.00e-113	402.00
IUUC-Mdo-061804	Monodelphis domestica	45.35	2.00e-113	402.00
IUUC-Mmu-063608	Mus musculus	43.74	3.00e-110	391.00
IUUC-Mac-064972	Musa acuminata	77.74	0.00e+00	841.00
IUUC-Mpu-065700	Mustela putorius furo	45.74	9.00e-115	406.00
IUUC-Mlu-068223	Myotis lucifugus	43.82	7.00e-111	393.00
IUUC-Nfi-068504	Neosartorya fischeri	36.19	6.00e-71	260.00
IUUC-Ncr-068729	Neurospora crassa	32.71	3.00e-57	215.00
IUUC-Nle-069754	Nomascus leucogenys	45.35	1.00e-113	402.00
IUUC-Opr-070621	Ochotona princeps	45.61	7.00e-106	376.00
IUUC-Ont-071377	Oreochromis niloticus	44.96	8.00e-114	403.00
IUUC-Oan-073498	Ornithorhynchus anatinus	31.83	3.00e-32	131.00
IUUC-Ocu-074182	Oryctolagus cuniculus	43.58	9.00e-110	389.00
IUUC-Oba-075509	Oryza barthii	75.67	0.00e+00	829.00
IUUC-Obr-076480	Oryza brachyantha	75.63	0.00e+00	830.00
IUUC-Ogl-077052	Oryza glaberrima	75.67	0.00e+00	830.00
IUUC-Ogu-078919	Oryza glumaepatula	75.67	0.00e+00	830.00
IUUC-Oin-079357	Oryza indica	72.03	0.00e+00	771.00
IUUC-Olo-080376	Oryza longistaminata	75.46	0.00e+00	775.00
IUUC-Ome-081973	Oryza meridionalis	75.66	0.00e+00	776.00
IUUC-Oni-082849	Oryza nivara	75.29	0.00e+00	826.00
IUUC-Opu-083243	Oryza punctata	76.05	0.00e+00	833.00
IUUC-Oru-084613	Oryza rufipogon	75.67	0.00e+00	829.00
IUUC-Osa-085407	Oryza sativa	75.48	0.00e+00	827.00
IUUC-Ola-086566	Oryzias latipes	43.93	7.00e-112	396.00
IUUC-Olu-087757	Ostreococcus lucimarinus	43.77	1.00e-111	395.00
IUUC-Oga-089010	Otolemur garnettii	44.19	1.00e-108	385.00
IUUC-Oar-089638	Ovis aries	45.54	5.00e-114	404.00
IUUC-Ptr-091141	Pan troglodytes	45.35	1.00e-113	402.00
IUUC-Pan-092662	Papio anubis	45.35	1.00e-113	402.00
IUUC-Psi-093777	Pelodiscus sinensis	45.06	8.00e-89	319.00
IUUC-Pno-095115	Phaeosphaeria nodorum	33.12	1.00e-60	226.00
IUUC-Ppa-095924	Physcomitrella patens	70.60	0.00e+00	758.00
IUUC-Pfo-096390	Poecilia formosa	44.77	4.00e-114	404.00
IUUC-Pab-098250	Pongo abelii	45.75	2.00e-109	389.00
IUUC-Pop-099854	Populus trichocarpa	82.85	0.00e+00	901.00
IUUC-Pca-100553	Procavia capensis	45.35	2.00e-111	395.00
IUUC-Ppe-101383	Prunus persica	78.81	0.00e+00	838.00
IUUC-Pva-102189	Pteropus vampyrus	45.54	4.00e-114	404.00
IUUC-Pgr-103304	Puccinia graminis	34.14	1.00e-74	273.00
IUUC-Ptt-103984	Puccinia triticina	33.33	1.00e-74	273.00
IUUC-Pte-104385	Pyrenophora teres	31.93	1.00e-61	229.00
IUUC-Pyt-104697	Pyrenophora triticirepentis	31.94	1.00e-61	229.00
IUUC-Rno-105581	Rattus norvegicus	45.35	9.00e-114	403.00
IUUC-Sce-106147	Saccharomyces cerevisiae	37.58	2.00e-22	100.00
IUUC-Sha-107071	Sarcophilus harrisii	43.49	2.00e-109	389.00
IUUC-Sja-107697	Schizosaccharomyces japonicus	32.37	1.00e-42	166.00
IUUC-Spo-108315	Schizosaccharomyces pombe	31.66	2.00e-40	159.00
IUUC-Ssl-108628	Sclerotinia sclerotiorum	34.13	1.00e-61	229.00
IUUC-Smo-109648	Selaginella moellendorffii	65.95	0.00e+00	723.00
IUUC-Sit-109873	Setaria italica	75.62	0.00e+00	840.00
IUUC-Stu-112125	Solanum tuberosum	98.08	0.00e+00	1011.00
IUUC-Sbi-114696	Sorghum bicolor	69.81	0.00e+00	735.00
IUUC-Sre-115134	Sporisorium reilianum	33.69	3.00e-77	281.00
IUUC-Ssc-116260	Sus scrofa	45.54	4.00e-114	404.00
IUUC-Tgu-116533	Taeniopygia guttata	45.16	5.00e-114	404.00
IUUC-Tru-117800	Takifugu rubripes	44.81	5.00e-113	400.00
IUUC-Tsy-118980	Tarsius syrichta	43.48	9.00e-100	356.00
IUUC-Tni-120334	Tetraodon nigroviridis	46.08	1.00e-76	279.00
IUUC-Tca-121807	Theobroma cacao	79.34	0.00e+00	876.00
IUUC-Tre-121920	Trichoderma reesei	32.50	1.00e-59	223.00
IUUC-Tvi-122294	Trichoderma virens	31.88	1.00e-50	192.00
IUUC-Tae-125713	Triticum aestivum	73.70	0.00e+00	823.00
IUUC-Tur-126664	Triticum urartu	65.67	0.00e+00	773.00
IUUC-Tme-127026	Tuber melanosporum	36.30	2.00e-70	259.00
IUUC-Tbe-127582	Tupaia belangeri	46.08	4.00e-77	281.00
IUUC-Ttr-128313	Tursiops truncatus	45.16	1.00e-112	399.00
IUUC-Uma-129626	Ustilago maydis	34.94	2.00e-77	282.00
IUUC-Vda-129699	Verticillium dahliae	33.33	1.00e-58	219.00
IUUC-Vpa-130593	Vicugna pacos	46.65	3.00e-105	374.00
IUUC-Vvi-131668	Vitis vinifera	84.59	0.00e+00	933.00
IUUC-Xtr-132186	Xenopus tropicalis	46.26	2.00e-96	345.00
IUUC-Xma-133212	Xiphophorus maculatus	44.96	2.00e-113	402.00
IUUC-Yli-134607	Yarrowia lipolytica	52.67	6.00e-35	138.00
IUUC-Zma-135662	Zea mays	75.43	0.00e+00	842.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence