iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cpo-021697

Ensembl Protein ID

ENSCPOP00000008645.2

UniProt Accession

H0VF22; H0VF22_CAVPO

Genbank Protein ID

ENSCPOP00000008645

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02013871

Gene Name

NEDD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000009631.3	ENSCPOT00000009718.2	ENSCPOP00000008645.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.60e-21	73.5	118	150
UBD/Beta-Prp	1.10e-47	162.6	78	300

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           H+d+vtc+ +  +d++++sGs  g i + +++t
   Q: 118  HKDEVTCVTYnwNDCYIASGSLSGEIILHSVTT 150
           ********887799************9988887 PP

UBD/Beta-Prp

   S: 11   svitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstg.kcvhtlkghedsvl 98
           +  tcv+    + +la+g+ ++t+ +wd++++   rsl +h++evt+v+++ ++ ++++gs  + i + ++ t+ + +   +g ++s++
   Q: 78   QKQTCVDLNSTSMYLASGGLNKTVNIWDLKSKRIHRSLTDHKDEVTCVTYNWNDCYIASGSLSGEIILHSVTTNiSSTPFGHGSNQSIR 166
           5568999999*******************************************99*************9888551555556699***** PP
   S: 99   slsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvys 185
            l++s ++ + l s s+   + +wd+++++ ++++ s h++  ++++++p +  l+v+ +lD+ + l+d + +kl++tl    + + + 
   Q: 167  HLKYSVYKkSLLGSVSDNGLVTLWDVNSQSPYHNFGSTHKAPASGICFSPVNeLLFVTIGLDKRIILYDTSCKKLVKTLV--AEAPLTA 253
           ******774677799*************************************99*************************6..59***** PP
   S: 186  lsfdsngkelvsgsldgtvklwdlq.tgecvrtlnghtdnvksvrfs 231
           ++f s+g  l+ gs  g++ l+dl+  ++ v+t  +h++ v++++f 
   Q: 254  VDFMSDGATLAIGSSRGKIYLYDLRmLKSPVKTISAHKTSVQCIAFQ 300
           *************************98889***************98 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MQENLRFASS GDDIKIWDAS SMTLIDKFNP HTSPHGISSM CWSSNNNFLV TASSSGDKIV 60
VSSCKCKPVP LLELAEGQKQ TCVDLNSTSM YLASGGLNKT VNIWDLKSKR IHRSLTDHKD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGGAAA ACCTCCGATT TGCTTCATCG GGAGATGATA TTAAAATATG GGATGCTTCA 60
TCTATGACAC TGATAGATAA ATTTAACCCA CACACATCAC CACATGGAAT TAGTTCAATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0045177--C:apical part of cell
GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000242--C:pericentriolar material
GO:0000922--C:spindle pole

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000871	Aegilops tauschii	37.50	2.00e-17	84.70
IUUC-Aml-002397	Ailuropoda melanoleuca	82.90	0.00e+00	1084.00
IUUC-Atr-002464	Amborella trichopoda	31.12	1.00e-39	157.00
IUUC-Apl-003870	Anas platyrhynchos	60.71	0.00e+00	785.00
IUUC-Aca-004925	Anolis carolinensis	59.14	0.00e+00	731.00
IUUC-Aly-005931	Arabidopsis lyrata	29.08	6.00e-40	159.00
IUUC-Ath-006681	Arabidopsis thaliana	29.00	8.00e-40	159.00
IUUC-Ame-010906	Astyanax mexicanus	42.60	4.00e-137	481.00
IUUC-Bta-013389	Bos taurus	83.36	0.00e+00	1092.00
IUUC-Bdi-014340	Brachypodium distachyon	31.58	8.00e-39	155.00
IUUC-Bol-016282	Brassica oleracea	31.41	2.00e-39	157.00
IUUC-Bra-017178	Brassica rapa	31.73	2.00e-39	157.00
IUUC-Cja-019541	Callithrix jacchus	83.21	0.00e+00	1105.00
IUUC-Cfa-021218	Canis familiaris	82.00	0.00e+00	1073.00
IUUC-Csa-023620	Chlorocebus sabaeus	83.21	0.00e+00	1118.00
IUUC-Cho-025105	Choloepus hoffmanni	76.88	0.00e+00	833.00
IUUC-Cin-025293	Ciona intestinalis	39.46	1.00e-60	227.00
IUUC-Csv-026234	Ciona savignyi	35.11	8.00e-50	190.00
IUUC-Dre-028251	Danio rerio	41.93	1.00e-126	446.00
IUUC-Dno-029281	Dasypus novemcinctus	83.67	0.00e+00	917.00
IUUC-Dor-031020	Dipodomys ordii	68.41	7.00e-154	537.00
IUUC-Ete-033113	Echinops telfairi	80.56	0.00e+00	636.00
IUUC-Eca-034230	Equus caballus	83.84	0.00e+00	1083.00
IUUC-Eeu-034671	Erinaceus europaeus	66.79	0.00e+00	706.00
IUUC-Fca-035775	Felis catus	83.66	0.00e+00	1104.00
IUUC-Fal-037557	Ficedula albicollis	58.73	0.00e+00	718.00
IUUC-Gmo-038586	Gadus morhua	58.75	1.00e-98	353.00
IUUC-Gga-040153	Gallus gallus	61.30	0.00e+00	804.00
IUUC-Gac-041385	Gasterosteus aculeatus	41.41	2.00e-122	432.00
IUUC-Gma-043049	Glycine max	32.25	3.00e-42	167.00
IUUC-Ggo-044576	Gorilla gorilla	83.66	0.00e+00	1145.00
IUUC-Hsa-046198	Homo sapiens	83.96	0.00e+00	1150.00
IUUC-Hvu-047794	Hordeum vulgare	37.50	1.00e-17	82.40
IUUC-Lch-050561	Latimeria chalumnae	47.20	1.00e-144	506.00
IUUC-Lpe-051469	Leersia perrieri	34.62	4.00e-37	149.00
IUUC-Loc-052816	Lepisosteus oculatus	46.66	4.00e-142	498.00
IUUC-Laf-053880	Loxodonta africana	80.82	0.00e+00	1026.00
IUUC-Mcc-054977	Macaca mulatta	83.51	0.00e+00	1120.00
IUUC-Meu-056141	Macropus eugenii	57.87	5.00e-167	581.00
IUUC-Mtr-058441	Medicago truncatula	32.51	2.00e-41	164.00
IUUC-Mga-060141	Meleagris gallopavo	60.21	0.00e+00	771.00
IUUC-Mmr-061201	Microcebus murinus	83.51	0.00e+00	1128.00
IUUC-Mdo-061855	Monodelphis domestica	68.15	0.00e+00	886.00
IUUC-Mmu-064342	Mus musculus	80.03	0.00e+00	1058.00
IUUC-Mac-065368	Musa acuminata	31.46	9.00e-39	155.00
IUUC-Mpu-066191	Mustela putorius furo	82.30	0.00e+00	1078.00
IUUC-Mlu-067310	Myotis lucifugus	81.09	0.00e+00	1062.00
IUUC-Nle-069990	Nomascus leucogenys	83.81	0.00e+00	1149.00
IUUC-Opr-070336	Ochotona princeps	75.19	0.00e+00	959.00
IUUC-Ont-071675	Oreochromis niloticus	43.22	7.00e-128	451.00
IUUC-Oan-072772	Ornithorhynchus anatinus	65.62	0.00e+00	715.00
IUUC-Ocu-074095	Oryctolagus cuniculus	83.66	0.00e+00	1101.00
IUUC-Oba-075327	Oryza barthii	30.51	5.00e-38	153.00
IUUC-Obr-076119	Oryza brachyantha	28.89	4.00e-39	156.00
IUUC-Ogl-077820	Oryza glaberrima	30.17	3.00e-37	150.00
IUUC-Ogu-078679	Oryza glumaepatula	30.74	7.00e-38	152.00
IUUC-Oin-079891	Oryza indica	30.51	3.00e-38	153.00
IUUC-Olo-080414	Oryza longistaminata	34.62	2.00e-37	150.00
IUUC-Ome-081888	Oryza meridionalis	30.85	3.00e-38	153.00
IUUC-Oni-082417	Oryza nivara	30.51	6.00e-38	152.00
IUUC-Opu-083393	Oryza punctata	30.27	5.00e-38	152.00
IUUC-Oru-084698	Oryza rufipogon	30.51	2.00e-38	154.00
IUUC-Osa-086121	Oryza sativa	30.51	6.00e-38	152.00
IUUC-Ola-086806	Oryzias latipes	39.41	4.00e-128	451.00
IUUC-Olu-087591	Ostreococcus lucimarinus	22.83	7.00e-15	75.10
IUUC-Oga-088622	Otolemur garnettii	82.05	0.00e+00	1098.00
IUUC-Oar-090391	Ovis aries	83.56	0.00e+00	934.00
IUUC-Ptr-091036	Pan troglodytes	83.81	0.00e+00	1145.00
IUUC-Pan-092576	Papio anubis	83.51	0.00e+00	1120.00
IUUC-Psi-093450	Pelodiscus sinensis	64.08	0.00e+00	815.00
IUUC-Pma-094101	Petromyzon marinus	55.63	4.00e-103	367.00
IUUC-Ppa-095636	Physcomitrella patens	31.27	7.00e-45	175.00
IUUC-Pfo-097142	Poecilia formosa	57.33	1.00e-104	374.00
IUUC-Pab-097829	Pongo abelii	84.11	0.00e+00	1146.00
IUUC-Pop-099687	Populus trichocarpa	32.24	2.00e-40	160.00
IUUC-Pca-100217	Procavia capensis	78.85	0.00e+00	660.00
IUUC-Ppe-101502	Prunus persica	31.73	2.00e-40	160.00
IUUC-Pva-102736	Pteropus vampyrus	81.39	0.00e+00	1077.00
IUUC-Rno-104977	Rattus norvegicus	79.88	0.00e+00	1020.00
IUUC-Sha-107003	Sarcophilus harrisii	67.71	0.00e+00	880.00
IUUC-Smo-109216	Selaginella moellendorffii	33.55	3.00e-40	159.00
IUUC-Sit-109796	Setaria italica	34.58	5.00e-38	152.00
IUUC-Sly-110941	Solanum lycopersicum	30.62	3.00e-37	150.00
IUUC-Stu-112314	Solanum tuberosum	31.27	7.00e-38	152.00
IUUC-Sar-112926	Sorex araneus	74.13	0.00e+00	976.00
IUUC-Sbi-113822	Sorghum bicolor	33.15	3.00e-28	120.00
IUUC-Ssc-116242	Sus scrofa	85.25	4.00e-177	613.00
IUUC-Tgu-116765	Taeniopygia guttata	59.82	0.00e+00	746.00
IUUC-Tru-117738	Takifugu rubripes	40.99	9.00e-141	494.00
IUUC-Tsy-118856	Tarsius syrichta	78.90	0.00e+00	985.00
IUUC-Tni-120871	Tetraodon nigroviridis	42.16	3.00e-139	488.00
IUUC-Tca-120965	Theobroma cacao	31.65	4.00e-39	156.00
IUUC-Tae-124830	Triticum aestivum	28.35	3.00e-39	157.00
IUUC-Tur-126840	Triticum urartu	29.49	3.00e-38	153.00
IUUC-Ttr-128551	Tursiops truncatus	80.94	0.00e+00	1053.00
IUUC-Vpa-130324	Vicugna pacos	84.42	0.00e+00	1093.00
IUUC-Vvi-131699	Vitis vinifera	31.75	6.00e-40	159.00
IUUC-Xtr-131956	Xenopus tropicalis	57.40	0.00e+00	745.00
IUUC-Xma-132982	Xiphophorus maculatus	57.00	3.00e-104	372.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence