iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016848

Ensembl Protein ID

Bra020355.1-P

UniProt Accession

M4DV12; M4DV12_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra020355	Bra020355.1	Bra020355.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-18	66.9	159	190

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDl 30
           H+ +vtcl+f    +++l+sG   g+i vWD+
   Q: 159  HSRRVTCLEFhptRNNILLSGDKKGQIGVWDF 190
           999********653399**************5 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGLTRNRRKK EPEIVIARDT ESSSSEEEDD YPLSESEKED EEVKIELDKS KAKGKAPITV 60
KLKKVCKVCK QPGHEAGFKG ATYIDCPMKP CFLCKMPGHT TMSCPHRVVT DQGILPTSHR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTTTAA CGAGGAACAG AAGAAAAAAG GAACCAGAAA TCGTCATTGC CAGGGATACA 60
GAGTCAAGTT CGTCTGAAGA GGAAGATGAT TACCCTTTGT CGGAGTCTGA GAAAGAAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001878--Znf_CCHC

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006281--P:DNA repair
GO:0010224--P:response to UV-B

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	64.30	0.00e+00	629.00
IUUC-Aml-002203	Ailuropoda melanoleuca	30.37	1.00e-33	136.00
IUUC-Atr-002957	Amborella trichopoda	69.33	0.00e+00	660.00
IUUC-Apl-003832	Anas platyrhynchos	33.44	9.00e-40	157.00
IUUC-Aca-004358	Anolis carolinensis	31.58	4.00e-43	169.00
IUUC-Aly-006296	Arabidopsis lyrata	87.68	0.00e+00	894.00
IUUC-Ath-007115	Arabidopsis thaliana	85.69	0.00e+00	853.00
IUUC-Ame-010817	Astyanax mexicanus	32.61	8.00e-43	167.00
IUUC-Bta-012914	Bos taurus	31.00	1.00e-37	150.00
IUUC-Bdi-014261	Brachypodium distachyon	65.12	0.00e+00	634.00
IUUC-Bol-015317	Brassica oleracea	93.41	0.00e+00	933.00
IUUC-Cja-018967	Callithrix jacchus	29.70	6.00e-35	141.00
IUUC-Cfa-021238	Canis familiaris	30.77	5.00e-32	131.00
IUUC-Cpo-022063	Cavia porcellus	30.98	1.00e-34	140.00
IUUC-Csa-023382	Chlorocebus sabaeus	29.70	1.00e-34	140.00
IUUC-Csv-026179	Ciona savignyi	23.53	2.00e-07	50.40
IUUC-Cne-027093	Cryptococcus neoformans	24.14	7.00e-09	55.50
IUUC-Dre-028732	Danio rerio	32.10	4.00e-35	142.00
IUUC-Dor-030461	Dipodomys ordii	35.56	6.00e-30	124.00
IUUC-Ete-033038	Echinops telfairi	30.79	2.00e-33	136.00
IUUC-Eca-033772	Equus caballus	30.98	2.00e-35	143.00
IUUC-Fca-036095	Felis catus	29.75	1.00e-32	133.00
IUUC-Gmo-039683	Gadus morhua	33.64	1.00e-45	177.00
IUUC-Gga-040530	Gallus gallus	33.94	4.00e-40	159.00
IUUC-Gac-041517	Gasterosteus aculeatus	32.11	3.00e-37	149.00
IUUC-Gma-043378	Glycine max	74.27	0.00e+00	728.00
IUUC-Ggo-045364	Gorilla gorilla	30.30	1.00e-35	143.00
IUUC-Hsa-046354	Homo sapiens	30.30	1.00e-35	143.00
IUUC-Hvu-047151	Hordeum vulgare	71.43	2.00e-122	431.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	31.90	7.00e-37	147.00
IUUC-Lpe-051256	Leersia perrieri	64.66	5.00e-177	613.00
IUUC-Loc-052398	Lepisosteus oculatus	31.68	4.00e-40	158.00
IUUC-Laf-053562	Loxodonta africana	32.00	1.00e-36	147.00
IUUC-Mcc-055197	Macaca mulatta	29.79	1.00e-29	123.00
IUUC-Meu-056151	Macropus eugenii	31.45	2.00e-31	129.00
IUUC-Mtr-057940	Medicago truncatula	73.98	0.00e+00	697.00
IUUC-Mga-059923	Meleagris gallopavo	34.04	2.00e-42	166.00
IUUC-Mmr-061465	Microcebus murinus	31.32	1.00e-30	126.00
IUUC-Mdo-063063	Monodelphis domestica	32.73	1.00e-40	160.00
IUUC-Mmu-064294	Mus musculus	31.69	2.00e-36	146.00
IUUC-Mac-065598	Musa acuminata	68.53	0.00e+00	656.00
IUUC-Mpu-066831	Mustela putorius furo	29.75	9.00e-32	130.00
IUUC-Mlu-067222	Myotis lucifugus	30.67	3.00e-34	139.00
IUUC-Nle-069581	Nomascus leucogenys	30.61	4.00e-36	145.00
IUUC-Opr-070644	Ochotona princeps	32.31	2.00e-36	145.00
IUUC-Ont-072605	Oreochromis niloticus	32.30	6.00e-40	158.00
IUUC-Oan-072973	Ornithorhynchus anatinus	33.03	2.00e-40	159.00
IUUC-Ocu-074615	Oryctolagus cuniculus	31.60	4.00e-36	145.00
IUUC-Oba-075283	Oryza barthii	63.79	1.00e-170	592.00
IUUC-Obr-076605	Oryza brachyantha	66.00	0.00e+00	635.00
IUUC-Ogl-077512	Oryza glaberrima	64.76	2.00e-175	608.00
IUUC-Ogu-078329	Oryza glumaepatula	64.00	8.00e-171	593.00
IUUC-Oin-079980	Oryza indica	64.00	1.00e-170	592.00
IUUC-Olo-080516	Oryza longistaminata	64.80	3.00e-171	594.00
IUUC-Ome-081415	Oryza meridionalis	64.00	6.00e-175	607.00
IUUC-Oni-082985	Oryza nivara	64.00	1.00e-170	592.00
IUUC-Opu-084159	Oryza punctata	66.00	0.00e+00	634.00
IUUC-Oru-085137	Oryza rufipogon	64.56	1.00e-176	612.00
IUUC-Osa-085614	Oryza sativa	65.03	1.00e-176	612.00
IUUC-Ola-087044	Oryzias latipes	33.02	1.00e-41	163.00
IUUC-Oga-088274	Otolemur garnettii	31.91	1.00e-36	147.00
IUUC-Oar-089826	Ovis aries	31.00	2.00e-37	149.00
IUUC-Ptr-091631	Pan troglodytes	30.30	1.00e-35	143.00
IUUC-Pan-092535	Papio anubis	29.70	3.00e-35	142.00
IUUC-Psi-093815	Pelodiscus sinensis	32.21	3.00e-37	149.00
IUUC-Pma-094474	Petromyzon marinus	32.73	5.00e-38	151.00
IUUC-Ppa-095414	Physcomitrella patens	60.14	3.00e-163	568.00
IUUC-Pfo-096559	Poecilia formosa	33.33	2.00e-40	160.00
IUUC-Pab-098528	Pongo abelii	30.30	2.00e-35	143.00
IUUC-Pop-100064	Populus trichocarpa	75.25	0.00e+00	739.00
IUUC-Pca-100803	Procavia capensis	31.08	5.00e-36	145.00
IUUC-Ppe-101966	Prunus persica	74.13	0.00e+00	717.00
IUUC-Pva-103213	Pteropus vampyrus	30.98	2.00e-36	146.00
IUUC-Rno-105087	Rattus norvegicus	32.01	1.00e-37	150.00
IUUC-Sha-107466	Sarcophilus harrisii	33.73	1.00e-42	167.00
IUUC-Smo-108958	Selaginella moellendorffii	55.96	4.00e-153	534.00
IUUC-Sit-109968	Setaria italica	67.29	6.00e-171	593.00
IUUC-Sly-111495	Solanum lycopersicum	72.33	0.00e+00	694.00
IUUC-Sar-113272	Sorex araneus	30.09	8.00e-34	137.00
IUUC-Sbi-114706	Sorghum bicolor	62.47	3.00e-160	557.00
IUUC-Ssc-115437	Sus scrofa	31.91	3.00e-33	135.00
IUUC-Tgu-116602	Taeniopygia guttata	32.31	3.00e-40	159.00
IUUC-Tru-118698	Takifugu rubripes	33.13	8.00e-36	144.00
IUUC-Tsy-119027	Tarsius syrichta	30.21	3.00e-28	119.00
IUUC-Tni-119787	Tetraodon nigroviridis	31.46	1.00e-43	170.00
IUUC-Tca-121447	Theobroma cacao	75.97	0.00e+00	708.00
IUUC-Tae-124613	Triticum aestivum	67.29	0.00e+00	633.00
IUUC-Tur-126724	Triticum urartu	66.75	0.00e+00	629.00
IUUC-Tbe-127680	Tupaia belangeri	28.98	2.00e-26	113.00
IUUC-Vvi-131001	Vitis vinifera	78.24	0.00e+00	721.00
IUUC-Xtr-132266	Xenopus tropicalis	33.95	4.00e-43	168.00
IUUC-Xma-133034	Xiphophorus maculatus	32.92	5.00e-39	155.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence