iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Laf-054242

Ensembl Protein ID

ENSLAFP00000011751.3

UniProt Accession

G3TCG3; G3TCG3_LOXAF

Protein Name

Uncharacterized protein

Gene Name

IFT172

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000014018.3	ENSLAFT00000014031.3	ENSLAFP00000011751.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-05	26.1	18	44

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf..sdtllvsGsdDgtikvWD 29
           +vtc+a+  ++  +++++ D ++ ++D
   Q: 18   KVTCMAWsqNNAKFAVCTVDRVVLLYD 44
           79*****9655779************9 PP

Organism

Loxodonta africana

Protein Sequence
(Fasta)

MQLKHLRTLL SPQDGAAKVT CMAWSQNNAK FAVCTVDRVV LLYDEHGERR DKFSTKPADM 60
KYGRKSYMVK GMAFSPDSTK IAIGQTDNII YVYKIGEDWG DKKVICNKFI QTSAVTCLQW 120

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Nucleotide Sequence
(Fasta)

ATGCAGCTGA AGCACCTGAG GACCCTGCTG AGCCCTCAGG TGAGGAGTTG TGCGCCTTTT 60
TCTTATGCCG CCGCTTTAAG ATCCTAGAAA AGTGGGGGAA GTGAAGTTTA AGGATGTTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016024--ARM-type_fold
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:1903561--C:extracellular vesicle
GO:0030992--C:intraciliary transport particle B
GO:0097598--C:sperm cytoplasmic droplet
GO:0097225--C:sperm midpiece
GO:0097228--C:sperm principal piece
GO:0060348--P:bone development
GO:0007420--P:brain development
GO:0031122--P:cytoplasmic microtubule organization
GO:0009953--P:dorsal/ventral pattern formation
GO:0008544--P:epidermis development
GO:0001947--P:heart looping
GO:0061525--P:hindgut development
GO:0070986--P:left/right axis specification
GO:0060173--P:limb development
GO:0050680--P:negative regulation of epithelial cell proliferation
GO:0001843--P:neural tube closure
GO:1905515--P:non-motile cilium assembly
GO:0007219--P:Notch signaling pathway
GO:0060021--P:palate development
GO:0045880--P:positive regulation of smoothened signaling pathway
GO:0016485--P:protein processing
GO:0007224--P:smoothened signaling pathway
GO:0021522--P:spinal cord motor neuron differentiation

KEGG

lav:100675945

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001775	Ailuropoda melanoleuca	97.88	0.00e+00	3419.00
IUUC-Apl-004180	Anas platyrhynchos	80.79	0.00e+00	2992.00
IUUC-Bta-012784	Bos taurus	98.06	0.00e+00	3387.00
IUUC-Cfa-020359	Canis familiaris	97.14	0.00e+00	3431.00
IUUC-Cre-022796	Chlamydomonas reinhardtii	24.05	8.00e-11	63.50
IUUC-Cho-024397	Choloepus hoffmanni	88.22	0.00e+00	1031.00
IUUC-Cin-025243	Ciona intestinalis	74.76	0.00e+00	791.00
IUUC-Csv-025964	Ciona savignyi	66.49	0.00e+00	1610.00
IUUC-Dno-029782	Dasypus novemcinctus	96.69	0.00e+00	2304.00
IUUC-Eca-033288	Equus caballus	98.40	0.00e+00	3457.00
IUUC-Fca-036387	Felis catus	97.60	0.00e+00	3469.00
IUUC-Hsa-046333	Homo sapiens	96.07	0.00e+00	1039.00
IUUC-Loc-052126	Lepisosteus oculatus	76.17	0.00e+00	2862.00
IUUC-Mcc-055460	Macaca mulatta	91.97	0.00e+00	3254.00
IUUC-Meu-056864	Macropus eugenii	95.09	0.00e+00	3306.00
IUUC-Mmr-060951	Microcebus murinus	94.51	0.00e+00	3287.00
IUUC-Mdo-062290	Monodelphis domestica	96.81	0.00e+00	3386.00
IUUC-Mlu-067149	Myotis lucifugus	95.65	0.00e+00	3416.00
IUUC-Nle-069497	Nomascus leucogenys	91.31	0.00e+00	3276.00
IUUC-Opr-070642	Ochotona princeps	96.44	0.00e+00	3390.00
IUUC-Ocu-074484	Oryctolagus cuniculus	96.91	0.00e+00	3438.00
IUUC-Ola-086935	Oryzias latipes	66.04	0.00e+00	2374.00
IUUC-Ptr-090769	Pan troglodytes	95.48	0.00e+00	3436.00
IUUC-Psi-093021	Pelodiscus sinensis	90.04	0.00e+00	975.00
IUUC-Pma-094497	Petromyzon marinus	23.48	3.00e-06	48.10
IUUC-Pva-102604	Pteropus vampyrus	95.88	0.00e+00	3345.00
IUUC-Rno-104875	Rattus norvegicus	92.77	0.00e+00	959.00
IUUC-Tgu-116577	Taeniopygia guttata	85.49	0.00e+00	956.00
IUUC-Tru-117611	Takifugu rubripes	69.13	0.00e+00	2595.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence