iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007234

UUCD1 version

UUC-ArT-00592

Ensembl Protein ID

AT4G26400.2

UniProt Accession

Q8L5Z3; Q8L5Z3_ARATH

Genbank Protein ID

AAM20658.1; AAN15624.1; AEE85193.1; AEE85194.1; BAH20182.1

Protein Name

AT4G26400 protein; Putative uncharacterized protein At4g26400; RING/U-box superfamily protein

Genbank Nucleotide ID

AY099807; BT000305; CP002687; CP002687; AK317517

Gene Name

At4g26400; M3E9.170; M3E9_170

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT4G26400	AT4G26400.2	AT4G26400.2

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.50e-07	30.1	241	282

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+df++g   + +pC+H fh  C+  w         + +CP+Cr
   Q: 241  CSICLDDFDKGseAKEMPCKHKFHIRCIVPW------LELHSSCPVCR 282
           ********77744667***************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MSARYWCHMC SQMVNPVIGA EIKCPFCQSG FVEEMSREIN GGSSSSLREV QDPEIDFGTD 60
RALSLWGPIL LGMMSNPRRR RRFRRTEFGV DNDEVNVSDD VDGNDSVDID RHHHRRHRHR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGATTGGGT CTGCGAACTA TACATTACAT TCCCTTTTCT TCGTCTTCAT CTTCGTCTTC 60
CTTTCCTCCT TCATTCCTCT TTTCTTCGTC TCCCACCATT TCTGCAGAAG AAGACAAATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0010200--P:response to chitin

KEGG

ath:AT4G26400

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006543	Arabidopsis lyrata	91.60	1.00e-143	501.00
IUUC-Bol-016290	Brassica oleracea	72.49	2.00e-119	422.00
IUUC-Bra-017827	Brassica rapa	72.54	4.00e-118	417.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence