iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggo-044561

Ensembl Protein ID

ENSGGOP00000015343.2

UniProt Accession

G3RI54; G3RI54_GORGO

Protein Name

Uncharacterized protein

Gene Name

CHAF1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGGOG00000015726.2	ENSGGOT00000015782.2	ENSGGOP00000015343.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-18	67.0	127	162

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++v+++++ +d +l++s+s D+t  +WD+++g 
   Q: 127  GHLEDVYDICWaTDgNLMASASVDNTAIIWDVSKGQ 162
           89**********999****************99886 PP

Organism

Gorilla gorilla

Protein Sequence
(Fasta)

MKVITCEIAW HNKEPVYSLD FQHGTAGRIH RLASAGVDTN VRIWKVEKGP DGKAIVEFLS 60
NLARHTKAVN VVRFSPTGEI LASGGDDAVI LLWKVNDNKE AEQIAFQDED EAQLNKENWT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGGAAGCGG CGCGCGCTGC GCGGGAGGTG ACGGTGTCTC TGACTGTCCG GGTCCCTGCA 60
GGTACGGCTT CCCTGGCCCG GGCAGCTCCG CGGCTCTTTT GGTCGCGTCG GTCCGGGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR029129--CAF1_p60_C
IPR001632--Gprotein_B
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF15512--CAF-1_p60_C
PF00400--WD40

PRINTS

PR00319--GPROTEINB

SMART

SM00320--WD40

Gene Ontology

GO:0033186--C:CAF-1 complex
GO:0005829--C:cytosol
GO:0000790--C:nuclear chromatin
GO:0005654--C:nucleoplasm
GO:0006335--P:DNA replication-dependent nucleosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000474	Aegilops tauschii	39.80	2.00e-82	300.00
IUUC-Aml-001755	Ailuropoda melanoleuca	84.27	0.00e+00	934.00
IUUC-Atr-002674	Amborella trichopoda	40.45	7.00e-86	310.00
IUUC-Apl-003701	Anas platyrhynchos	73.00	0.00e+00	811.00
IUUC-Aca-004692	Anolis carolinensis	72.93	0.00e+00	773.00
IUUC-Aly-006286	Arabidopsis lyrata	39.38	1.00e-86	313.00
IUUC-Ath-007683	Arabidopsis thaliana	39.56	3.00e-86	311.00
IUUC-Ago-007940	Ashbya gossypii	35.48	4.00e-65	241.00
IUUC-Acl-008070	Aspergillus clavatus	42.92	2.00e-44	174.00
IUUC-Afl-008414	Aspergillus flavus	41.23	1.00e-43	171.00
IUUC-Ani-009399	Aspergillus nidulans	44.81	6.00e-44	172.00
IUUC-Ang-009650	Aspergillus niger	39.63	4.00e-42	166.00
IUUC-Aor-009937	Aspergillus oryzae	41.23	1.00e-43	171.00
IUUC-Ate-010505	Aspergillus terreus	35.07	3.00e-27	116.00
IUUC-Ame-011094	Astyanax mexicanus	63.27	0.00e+00	646.00
IUUC-Bgr-012005	Blumeria graminis	40.19	9.00e-40	158.00
IUUC-Bta-013423	Bos taurus	84.03	0.00e+00	915.00
IUUC-Bci-013847	Botrytis cinerea	40.76	2.00e-41	164.00
IUUC-Bdi-014860	Brachypodium distachyon	41.81	9.00e-83	300.00
IUUC-Bol-016603	Brassica oleracea	37.29	7.00e-83	301.00
IUUC-Bra-017175	Brassica rapa	40.60	5.00e-80	291.00
IUUC-Cel-018272	Caenorhabditis elegans	35.24	1.00e-57	216.00
IUUC-Cja-019558	Callithrix jacchus	94.32	0.00e+00	1022.00
IUUC-Cfa-020900	Canis familiaris	83.93	0.00e+00	914.00
IUUC-Cpo-022054	Cavia porcellus	78.73	0.00e+00	825.00
IUUC-Csa-023850	Chlorocebus sabaeus	96.97	0.00e+00	1058.00
IUUC-Cho-024510	Choloepus hoffmanni	84.43	7.00e-143	500.00
IUUC-Cin-025178	Ciona intestinalis	47.84	3.00e-109	388.00
IUUC-Csv-025885	Ciona savignyi	48.98	4.00e-37	146.00
IUUC-Cgl-026572	Colletotrichum gloeosporioides	43.35	2.00e-36	147.00
IUUC-Cne-027015	Cryptococcus neoformans	35.20	3.00e-37	150.00
IUUC-Cme-027136	Cyanidioschyzon merolae	31.02	9.00e-57	214.00
IUUC-Dre-027879	Danio rerio	56.44	0.00e+00	670.00
IUUC-Dno-029335	Dasypus novemcinctus	88.05	0.00e+00	1004.00
IUUC-Dor-030520	Dipodomys ordii	71.12	0.00e+00	746.00
IUUC-Dse-031566	Dothistroma septosporum	41.31	2.00e-43	170.00
IUUC-Dme-031838	Drosophila melanogaster	48.08	8.00e-110	391.00
IUUC-Eca-033563	Equus caballus	89.13	0.00e+00	1034.00
IUUC-Fca-036052	Felis catus	83.45	0.00e+00	917.00
IUUC-Fal-037080	Ficedula albicollis	70.51	0.00e+00	790.00
IUUC-Fox-038022	Fusarium oxysporum	41.31	3.00e-41	163.00
IUUC-Fso-038115	Fusarium solani	42.25	1.00e-40	161.00
IUUC-Gmo-039461	Gadus morhua	71.47	2.00e-134	471.00
IUUC-Ggr-040100	Gaeumannomyces graminis	40.28	8.00e-41	162.00
IUUC-Gga-041133	Gallus gallus	72.87	0.00e+00	806.00
IUUC-Gac-041769	Gasterosteus aculeatus	63.96	0.00e+00	655.00
IUUC-Gma-043070	Glycine max	41.56	3.00e-95	342.00
IUUC-Hsa-046150	Homo sapiens	98.93	0.00e+00	1066.00
IUUC-Hvu-047792	Hordeum vulgare	38.28	2.00e-51	195.00
IUUC-Itr-048630	Ictidomys tridecemlineatus	89.75	0.00e+00	927.00
IUUC-Kpa-049397	Komagataella pastoris	40.10	8.00e-83	300.00
IUUC-Lch-050365	Latimeria chalumnae	53.77	4.00e-146	511.00
IUUC-Lpe-050875	Leersia perrieri	40.30	7.00e-83	301.00
IUUC-Loc-052770	Lepisosteus oculatus	68.73	0.00e+00	685.00
IUUC-Lma-053291	Leptosphaeria maculans	39.91	5.00e-43	169.00
IUUC-Laf-053505	Loxodonta africana	86.64	0.00e+00	1011.00
IUUC-Mcc-054803	Macaca mulatta	97.33	0.00e+00	1060.00
IUUC-Meu-056578	Macropus eugenii	71.35	0.00e+00	781.00
IUUC-Mor-057211	Magnaporthe oryzae	40.09	1.00e-39	158.00
IUUC-Mpo-057411	Magnaporthe poae	39.81	6.00e-40	159.00
IUUC-Mtr-058066	Medicago truncatula	42.32	1.00e-94	340.00
IUUC-Mga-059735	Meleagris gallopavo	72.70	0.00e+00	809.00
IUUC-Mmr-061343	Microcebus murinus	92.32	0.00e+00	1070.00
IUUC-Mdo-062065	Monodelphis domestica	79.35	0.00e+00	876.00
IUUC-Mmu-063501	Mus musculus	85.36	0.00e+00	894.00
IUUC-Mac-064864	Musa acuminata	38.81	9.00e-83	300.00
IUUC-Mpu-066549	Mustela putorius furo	82.78	0.00e+00	900.00
IUUC-Mlu-067121	Myotis lucifugus	76.68	0.00e+00	832.00
IUUC-Nfi-068462	Neosartorya fischeri	43.40	8.00e-45	175.00
IUUC-Ncr-068838	Neurospora crassa	39.25	2.00e-41	164.00
IUUC-Nle-069854	Nomascus leucogenys	98.04	0.00e+00	1045.00
IUUC-Opr-070803	Ochotona princeps	80.18	0.00e+00	882.00
IUUC-Ont-071642	Oreochromis niloticus	65.13	0.00e+00	659.00
IUUC-Oan-073675	Ornithorhynchus anatinus	76.84	0.00e+00	845.00
IUUC-Ocu-073863	Oryctolagus cuniculus	95.29	0.00e+00	771.00
IUUC-Oba-075682	Oryza barthii	39.55	9.00e-78	284.00
IUUC-Obr-076039	Oryza brachyantha	42.07	2.00e-84	306.00
IUUC-Ogu-078021	Oryza glumaepatula	40.55	2.00e-82	299.00
IUUC-Oin-079908	Oryza indica	35.44	3.00e-62	232.00
IUUC-Olo-081063	Oryza longistaminata	40.55	1.00e-82	300.00
IUUC-Ome-081930	Oryza meridionalis	40.30	1.00e-81	296.00
IUUC-Oni-082547	Oryza nivara	40.55	2.00e-82	299.00
IUUC-Opu-084089	Oryza punctata	40.05	8.00e-80	291.00
IUUC-Oru-084844	Oryza rufipogon	40.55	2.00e-82	299.00
IUUC-Osa-085582	Oryza sativa	40.55	2.00e-82	299.00
IUUC-Ola-087187	Oryzias latipes	61.42	0.00e+00	666.00
IUUC-Olu-087792	Ostreococcus lucimarinus	38.81	2.00e-77	283.00
IUUC-Oga-088390	Otolemur garnettii	88.21	0.00e+00	1026.00
IUUC-Oar-089740	Ovis aries	82.92	0.00e+00	878.00
IUUC-Ptr-091581	Pan troglodytes	98.57	0.00e+00	1069.00
IUUC-Pan-092258	Papio anubis	89.96	0.00e+00	972.00
IUUC-Psi-093761	Pelodiscus sinensis	74.69	0.00e+00	840.00
IUUC-Ppa-095428	Physcomitrella patens	41.83	9.00e-92	330.00
IUUC-Pfo-097357	Poecilia formosa	75.43	0.00e+00	657.00
IUUC-Pab-098520	Pongo abelii	97.68	0.00e+00	1058.00
IUUC-Pop-099331	Populus trichocarpa	37.24	3.00e-87	315.00
IUUC-Ppe-101548	Prunus persica	40.69	2.00e-88	319.00
IUUC-Pva-103243	Pteropus vampyrus	86.92	0.00e+00	892.00
IUUC-Pgr-103591	Puccinia graminis	32.96	1.00e-34	142.00
IUUC-Pte-104247	Pyrenophora teres	40.85	7.00e-43	168.00
IUUC-Pyt-104641	Pyrenophora triticirepentis	40.85	9.00e-43	168.00
IUUC-Rno-105202	Rattus norvegicus	84.98	0.00e+00	897.00
IUUC-Sce-106250	Saccharomyces cerevisiae	34.27	3.00e-73	268.00
IUUC-Sha-107036	Sarcophilus harrisii	81.15	0.00e+00	914.00
IUUC-Sja-107912	Schizosaccharomyces japonicus	37.47	5.00e-77	281.00
IUUC-Spo-108050	Schizosaccharomyces pombe	33.26	3.00e-70	259.00
IUUC-Ssl-108607	Sclerotinia sclerotiorum	38.68	7.00e-42	165.00
IUUC-Sit-109838	Setaria italica	42.14	8.00e-85	307.00
IUUC-Sly-110872	Solanum lycopersicum	39.49	2.00e-83	302.00
IUUC-Stu-111933	Solanum tuberosum	39.25	2.00e-80	292.00
IUUC-Sbi-114587	Sorghum bicolor	40.38	1.00e-85	310.00
IUUC-Ssc-115462	Sus scrofa	87.57	0.00e+00	985.00
IUUC-Tgu-117186	Taeniopygia guttata	70.67	0.00e+00	773.00
IUUC-Tru-118310	Takifugu rubripes	59.30	0.00e+00	661.00
IUUC-Tsy-118927	Tarsius syrichta	85.44	0.00e+00	759.00
IUUC-Tni-120832	Tetraodon nigroviridis	58.45	0.00e+00	651.00
IUUC-Tca-121584	Theobroma cacao	43.22	1.00e-88	320.00
IUUC-Tre-122140	Trichoderma reesei	40.38	9.00e-40	158.00
IUUC-Tvi-122663	Trichoderma virens	41.31	2.00e-40	160.00
IUUC-Tae-124502	Triticum aestivum	39.80	3.00e-82	298.00
IUUC-Tur-126239	Triticum urartu	39.80	1.00e-82	300.00
IUUC-Tme-127108	Tuber melanosporum	40.24	2.00e-81	296.00
IUUC-Ttr-129010	Tursiops truncatus	88.41	0.00e+00	976.00
IUUC-Vda-129825	Verticillium dahliae	42.92	7.00e-43	168.00
IUUC-Vpa-130374	Vicugna pacos	80.54	1.00e-100	360.00
IUUC-Vvi-131136	Vitis vinifera	40.60	5.00e-85	308.00
IUUC-Xtr-132141	Xenopus tropicalis	74.67	0.00e+00	704.00
IUUC-Xma-133980	Xiphophorus maculatus	75.93	0.00e+00	659.00
IUUC-Yli-134457	Yarrowia lipolytica	39.82	2.00e-38	154.00
IUUC-Zma-135321	Zea mays	42.21	7.00e-86	311.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence