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Tag Content
UUCD2 ID IUUC-Ssc-115751
UUCD1 version UUC-SuS-00594
Ensembl Protein ID ENSSSCP00000019030.2
UniProt Accession F1ST12; F1ST12_PIG
Genbank Protein ID ENSSSCP00000019030
Protein Name Uncharacterized protein
Genbank Nucleotide ID CU972380
Gene Name CHD3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSSCG00000021363.1 ENSSSCT00000019548.2 ENSSSCP00000019030.2
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/PHD 7.10e-16 58.4 380 425
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/PHD
   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++gge    ++ C+ C +++H  Cl ++  +  p+ + w Cp C++
   Q: 380  DYCEVCQQGGE----IILCDTCPRAYHLVCLDPE-LDRAPEGK-WSCPHCEK 425
           79*********....9******************.*******7.******86 PP
   
Organism Sus scrofa
Protein Sequence
(Fasta)
MQEPDPAILW ARSGHDWLRI SFPPGLCWGD RRFDKDDIRL LPSALGVKKR KRGPKKQKEN 60
KPGKPRKRKK LDSEEEFGSE RDEYREKSES GGSEYGTGPG RKRRRKHREK KEKKTKRRKK 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ssc-115751|E3,PHD|Sus scrofa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGCAGGAGC CAGACCCCGC CATCCTGTGG GCAAGAAGTG GGCATGACTG GCTGAGGATT 60
TCTTTTCCTC CAGGGCTGTG CTGGGGTGAC AGGAGATTTG GTGACTCTCT GAGGAATTAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ssc-115751|E3,PHD|Sus scrofa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR028722--CHD3
IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009071--HMG_box_dom
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N
SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD
Gene Ontology

GO:0005813--C:centrosome
GO:0005737--C:cytoplasm
GO:0005730--C:nucleolus
GO:0016581--C:NuRD complex
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0003723--F:RNA binding
GO:0008270--F:zinc ion binding
GO:0051297--P:centrosome organization
GO:0006333--P:chromatin assembly or disassembly
GO:0006355--P:regulation of transcription, DNA-templated
GO:0007051--P:spindle organization
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aca-004560 Anolis carolinensis 82.48 0.00e+00 2724.00
IUUC-Ame-011352 Astyanax mexicanus 79.70 0.00e+00 2071.00
IUUC-Bta-012868 Bos taurus 98.00 0.00e+00 3295.00
IUUC-Cja-019018 Callithrix jacchus 90.16 0.00e+00 3105.00
IUUC-Cfa-021055 Canis familiaris 97.45 0.00e+00 3236.00
IUUC-Cpo-021523 Cavia porcellus 97.97 0.00e+00 3282.00
IUUC-Csa-024136 Chlorocebus sabaeus 98.27 0.00e+00 3169.00
IUUC-Csv-025847 Ciona savignyi 54.42 0.00e+00 1415.00
IUUC-Dre-028226 Danio rerio 70.66 0.00e+00 2200.00
IUUC-Dor-030167 Dipodomys ordii 96.57 0.00e+00 2620.00
IUUC-Ete-032757 Echinops telfairi 91.86 0.00e+00 2890.00
IUUC-Eeu-034777 Erinaceus europaeus 88.39 0.00e+00 2637.00
IUUC-Fca-036043 Felis catus 97.77 0.00e+00 3229.00
IUUC-Gmo-038957 Gadus morhua 80.10 0.00e+00 1460.00
IUUC-Gac-041375 Gasterosteus aculeatus 70.79 0.00e+00 2546.00
IUUC-Gma-043999 Glycine max 43.55 0.00e+00 736.00
IUUC-Ggo-045538 Gorilla gorilla 98.63 0.00e+00 3167.00
IUUC-Hsa-045916 Homo sapiens 98.68 0.00e+00 3159.00
IUUC-Itr-048463 Ictidomys tridecemlineatus 98.34 0.00e+00 3127.00
IUUC-Lch-050343 Latimeria chalumnae 79.58 0.00e+00 2093.00
IUUC-Loc-052383 Lepisosteus oculatus 81.35 0.00e+00 2069.00
IUUC-Laf-053870 Loxodonta africana 98.01 0.00e+00 2860.00
IUUC-Mcc-055499 Macaca mulatta 92.02 0.00e+00 3040.00
IUUC-Meu-056292 Macropus eugenii 90.03 0.00e+00 1253.00
IUUC-Mmr-061223 Microcebus murinus 97.11 0.00e+00 3181.00
IUUC-Mdo-062971 Monodelphis domestica 92.37 0.00e+00 2845.00
IUUC-Mmu-063920 Mus musculus 96.35 0.00e+00 3133.00
IUUC-Mpu-065809 Mustela putorius furo 98.05 0.00e+00 2967.00
IUUC-Mlu-067355 Myotis lucifugus 96.80 0.00e+00 3263.00
IUUC-Nle-069842 Nomascus leucogenys 97.56 0.00e+00 3035.00
IUUC-Opr-070960 Ochotona princeps 96.16 0.00e+00 3078.00
IUUC-Ont-072647 Oreochromis niloticus 68.08 0.00e+00 2350.00
IUUC-Oan-072885 Ornithorhynchus anatinus 59.94 0.00e+00 1932.00
IUUC-Ocu-074438 Oryctolagus cuniculus 92.89 0.00e+00 3042.00
IUUC-Oga-088374 Otolemur garnettii 97.82 0.00e+00 3190.00
IUUC-Oar-089784 Ovis aries 95.06 0.00e+00 3239.00
IUUC-Ptr-090799 Pan troglodytes 98.73 0.00e+00 3169.00
IUUC-Pfo-096265 Poecilia formosa 75.82 0.00e+00 2079.00
IUUC-Pab-098174 Pongo abelii 93.51 0.00e+00 3049.00
IUUC-Pca-100829 Procavia capensis 96.26 0.00e+00 2362.00
IUUC-Rno-104884 Rattus norvegicus 96.03 0.00e+00 2986.00
IUUC-Sha-107233 Sarcophilus harrisii 92.66 0.00e+00 3031.00
IUUC-Sly-110976 Solanum lycopersicum 43.57 0.00e+00 738.00
IUUC-Tru-118648 Takifugu rubripes 75.91 0.00e+00 2132.00
IUUC-Tni-120039 Tetraodon nigroviridis 74.97 0.00e+00 2094.00
IUUC-Tbe-128117 Tupaia belangeri 92.29 0.00e+00 1323.00
IUUC-Vpa-130209 Vicugna pacos 88.27 0.00e+00 644.00
IUUC-Vvi-130849 Vitis vinifera 43.77 0.00e+00 737.00
IUUC-Xtr-132833 Xenopus tropicalis 72.65 0.00e+00 2431.00
Created Date 25-Jun-2017

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