iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095355

Ensembl Protein ID

PP1S4_436V6.2

UniProt Accession

A9REM1; A9REM1_PHYPA

Genbank Protein ID

EDQ82699.1

Protein Name

Inner dynein arm I1 intermediate chain IC138

Genbank Nucleotide ID

DS544893

Gene Name

PHYPADRAFT_65120

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S4_436V6	PP1S4_436V6.2	PP1S4_436V6.2
PP1S4_436V6	PP1S4_436V6.1	PP1S4_436V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.30e-10	40.0	235	269

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf..sd.tllvsGsdDgtikvWDlrtgvl 35
           ++vt+l+f  s+  ll++G ++g++ ++D+r  ++
   Q: 235  SGVTSLDFatSSpSLLAVGFYNGNVAIYDVRNPRD 269
           78*******86668899999**********98765 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MASRRGSTLG GQSRRQSASK RTSVASRRAS TSGGMSQGQG LDDVIRLMSP VSIVTGAGSV 60
GDSQGSEPVQ SEVDISKIPG LFKALEHVER ACVLNTYHDK LLGYMNFRAR EVEPPPEPDK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTCCA GAAGGGGATC AACTCTTGGT GGTCAATCAC GGCGACAGTC GGCCTCGAAA 60
AGAACAAGTG TAGCGTCAAG GCGTGCTTCA ACAAGCGGGG GAATGTCACA AGGGCAGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_65120

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002359	Ailuropoda melanoleuca	45.86	4.00e-39	155.00
IUUC-Apl-004037	Anas platyrhynchos	36.78	2.00e-37	150.00
IUUC-Aca-004686	Anolis carolinensis	45.16	3.00e-40	159.00
IUUC-Ame-010641	Astyanax mexicanus	36.95	8.00e-37	148.00
IUUC-Bta-012779	Bos taurus	47.77	1.00e-40	161.00
IUUC-Cja-019217	Callithrix jacchus	45.81	8.00e-39	155.00
IUUC-Cfa-020613	Canis familiaris	44.59	7.00e-38	151.00
IUUC-Cpo-022374	Cavia porcellus	47.13	2.00e-40	160.00
IUUC-Cre-022804	Chlamydomonas reinhardtii	44.37	4.00e-33	135.00
IUUC-Csa-023471	Chlorocebus sabaeus	45.22	2.00e-38	154.00
IUUC-Cho-024485	Choloepus hoffmanni	36.94	3.00e-26	113.00
IUUC-Cin-025295	Ciona intestinalis	46.20	1.00e-38	154.00
IUUC-Csv-025888	Ciona savignyi	47.47	1.00e-39	157.00
IUUC-Dre-027657	Danio rerio	49.02	2.00e-41	163.00
IUUC-Dno-029422	Dasypus novemcinctus	45.86	7.00e-40	158.00
IUUC-Dor-030738	Dipodomys ordii	37.04	3.00e-33	136.00
IUUC-Dme-032178	Drosophila melanogaster	32.90	1.00e-22	100.00
IUUC-Ete-033096	Echinops telfairi	38.27	5.00e-34	139.00
IUUC-Eca-033418	Equus caballus	44.59	1.00e-36	147.00
IUUC-Eeu-035088	Erinaceus europaeus	52.04	2.00e-27	117.00
IUUC-Fca-035471	Felis catus	44.59	3.00e-38	152.00
IUUC-Fal-036908	Ficedula albicollis	45.22	1.00e-33	137.00
IUUC-Gmo-039187	Gadus morhua	35.16	4.00e-30	125.00
IUUC-Gga-040422	Gallus gallus	30.95	1.00e-39	157.00
IUUC-Gac-042452	Gasterosteus aculeatus	38.33	1.00e-33	137.00
IUUC-Ggo-045038	Gorilla gorilla	39.51	5.00e-34	138.00
IUUC-Hsa-046857	Homo sapiens	47.13	4.00e-39	155.00
IUUC-Itr-048176	Ictidomys tridecemlineatus	45.86	4.00e-39	155.00
IUUC-Kpa-049295	Komagataella pastoris	28.57	2.00e-08	53.50
IUUC-Lch-050496	Latimeria chalumnae	46.11	2.00e-43	170.00
IUUC-Loc-052759	Lepisosteus oculatus	45.06	3.00e-42	166.00
IUUC-Laf-053515	Loxodonta africana	47.13	2.00e-40	160.00
IUUC-Mcc-054741	Macaca mulatta	45.22	7.00e-39	155.00
IUUC-Meu-056698	Macropus eugenii	48.85	1.00e-33	137.00
IUUC-Mga-059689	Meleagris gallopavo	31.99	2.00e-38	153.00
IUUC-Mvi-060541	Microbotryum violaceum	26.47	2.00e-10	60.80
IUUC-Mmr-061626	Microcebus murinus	37.04	7.00e-33	135.00
IUUC-Mdo-061968	Monodelphis domestica	43.67	2.00e-39	156.00
IUUC-Mmu-063908	Mus musculus	49.68	1.00e-41	164.00
IUUC-Mpu-065957	Mustela putorius furo	45.86	2.00e-39	157.00
IUUC-Mlu-067454	Myotis lucifugus	43.95	1.00e-38	154.00
IUUC-Nle-069312	Nomascus leucogenys	46.50	1.00e-39	157.00
IUUC-Opr-071052	Ochotona princeps	38.27	2.00e-33	137.00
IUUC-Ont-072322	Oreochromis niloticus	40.38	9.00e-35	141.00
IUUC-Oan-073666	Ornithorhynchus anatinus	36.26	5.00e-42	165.00
IUUC-Ocu-074719	Oryctolagus cuniculus	43.95	3.00e-37	149.00
IUUC-Ola-087351	Oryzias latipes	40.57	2.00e-16	79.30
IUUC-Olu-087835	Ostreococcus lucimarinus	32.52	7.00e-15	74.30
IUUC-Oga-088476	Otolemur garnettii	44.59	4.00e-39	155.00
IUUC-Oar-089261	Ovis aries	47.13	7.00e-40	158.00
IUUC-Ptr-091329	Pan troglodytes	39.51	6.00e-34	138.00
IUUC-Pan-091774	Papio anubis	45.22	8.00e-39	155.00
IUUC-Psi-093526	Pelodiscus sinensis	46.36	1.00e-38	154.00
IUUC-Pma-094402	Petromyzon marinus	34.64	4.00e-32	131.00
IUUC-Pfo-097027	Poecilia formosa	37.43	2.00e-33	136.00
IUUC-Pab-098218	Pongo abelii	45.86	4.00e-39	155.00
IUUC-Pca-100350	Procavia capensis	39.06	2.00e-25	110.00
IUUC-Pva-103001	Pteropus vampyrus	37.04	3.00e-31	129.00
IUUC-Pte-104046	Pyrenophora teres	27.62	2.00e-07	50.40
IUUC-Pyt-104796	Pyrenophora triticirepentis	26.67	3.00e-07	49.70
IUUC-Rno-105674	Rattus norvegicus	50.32	2.00e-42	166.00
IUUC-Sha-107552	Sarcophilus harrisii	50.64	1.00e-43	171.00
IUUC-Spo-108374	Schizosaccharomyces pombe	24.58	7.00e-07	48.10
IUUC-Smo-109353	Selaginella moellendorffii	56.83	1.00e-42	166.00
IUUC-Sar-113136	Sorex araneus	45.86	6.00e-39	155.00
IUUC-Sre-114966	Sporisorium reilianum	27.41	5.00e-10	58.90
IUUC-Ssc-116203	Sus scrofa	48.41	5.00e-41	161.00
IUUC-Tgu-117141	Taeniopygia guttata	45.16	4.00e-36	145.00
IUUC-Tru-118061	Takifugu rubripes	38.04	6.00e-34	138.00
IUUC-Tni-119670	Tetraodon nigroviridis	35.10	7.00e-29	121.00
IUUC-Tbe-127913	Tupaia belangeri	46.50	4.00e-39	155.00
IUUC-Ttr-128515	Tursiops truncatus	46.15	2.00e-39	157.00
IUUC-Uma-129615	Ustilago maydis	25.19	6.00e-09	55.50
IUUC-Vpa-130560	Vicugna pacos	52.63	9.00e-15	75.10
IUUC-Xtr-131755	Xenopus tropicalis	42.19	9.00e-41	161.00
IUUC-Xma-133351	Xiphophorus maculatus	36.87	1.00e-32	134.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence