iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049531

Ensembl Protein ID

ENSLACP00000015891.1

UniProt Accession

H3B1X0; H3B1X0_LATCH

Genbank Protein ID

ENSLACP00000015891

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01084546

Gene Name

TRIM23

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000013993.1	ENSLACT00000016001.1	ENSLACP00000015891.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	91.32	0.00e+00	1058.00	IUUC-Hsa-045801

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MAAAAGAAAA VNKLGAAAGM ELCGKQSRGA GGSGVKVLEC GVCEDVFSLQ GEKVPRLLLC 60
GHTVCHDCLT RLPLHGRAVR CPFDRQVTEL GDSGVWGLKK NFALLELLER LQNGASNQSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCTCTCTCA CGCCTGCGCA GTCAGCAGGC TGACGAAAAC AGCTGATAGA AACAACCATT 60
TTTTCCTAAG AGGGGGGGAA AGAGCTTCAC AAACCCAAAC GCTGGTTTTT GTTTTGTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0342--GTP-binding
KW-0479--Metal-binding
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003649--Bbox_C
IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR024156--Small_GTPase_ARF
IPR006689--Small_GTPase_ARF/SAR
IPR000315--Znf_B-box
IPR013087--Znf_C2H2_type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51417--ARF
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2
PS50157--ZINC_FINGER_C2H2_2

Pfam

PF00025--Arf
PF00643--zf-B_box
PF14634--zf-RING_5

PRINTS

PR00328--SAR1GTPBP

SMART

SM00502--BBC
SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0008270--F:zinc ion binding
GO:0007264--P:small GTPase mediated signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001685	Ailuropoda melanoleuca	90.09	0.00e+00	1038.00
IUUC-Apl-003280	Anas platyrhynchos	92.55	0.00e+00	1057.00
IUUC-Aca-004587	Anolis carolinensis	89.53	0.00e+00	977.00
IUUC-Ame-010760	Astyanax mexicanus	91.10	0.00e+00	1088.00
IUUC-Bta-013139	Bos taurus	88.75	0.00e+00	1023.00
IUUC-Cel-018197	Caenorhabditis elegans	36.10	2.00e-94	339.00
IUUC-Cja-019407	Callithrix jacchus	89.53	0.00e+00	1038.00
IUUC-Cfa-020758	Canis familiaris	90.14	0.00e+00	1029.00
IUUC-Cpo-022050	Cavia porcellus	89.88	0.00e+00	1061.00
IUUC-Csa-023938	Chlorocebus sabaeus	89.70	0.00e+00	1040.00
IUUC-Cho-024793	Choloepus hoffmanni	71.95	0.00e+00	706.00
IUUC-Cin-025424	Ciona intestinalis	55.46	4.00e-180	624.00
IUUC-Csv-025949	Ciona savignyi	54.96	3.00e-178	618.00
IUUC-Dre-028835	Danio rerio	89.88	0.00e+00	1072.00
IUUC-Dno-029080	Dasypus novemcinctus	81.93	0.00e+00	944.00
IUUC-Dor-031092	Dipodomys ordii	84.12	0.00e+00	983.00
IUUC-Ete-033169	Echinops telfairi	78.36	0.00e+00	875.00
IUUC-Eca-033509	Equus caballus	90.40	0.00e+00	1044.00
IUUC-Eeu-034669	Erinaceus europaeus	95.13	3.00e-128	451.00
IUUC-Fca-035813	Felis catus	90.05	0.00e+00	1038.00
IUUC-Fal-037222	Ficedula albicollis	92.35	0.00e+00	1060.00
IUUC-Gmo-038996	Gadus morhua	89.90	0.00e+00	1073.00
IUUC-Gga-040181	Gallus gallus	90.23	0.00e+00	1078.00
IUUC-Gac-041763	Gasterosteus aculeatus	89.72	0.00e+00	1064.00
IUUC-Gma-042758	Glycine max	33.63	2.00e-06	46.20
IUUC-Ggo-044808	Gorilla gorilla	84.52	0.00e+00	978.00
IUUC-Hsa-045801	Homo sapiens	89.70	0.00e+00	1040.00
IUUC-Itr-048568	Ictidomys tridecemlineatus	90.23	0.00e+00	1041.00
IUUC-Loc-052929	Lepisosteus oculatus	91.27	0.00e+00	1089.00
IUUC-Laf-053593	Loxodonta africana	90.05	0.00e+00	1039.00
IUUC-Mcc-055065	Macaca mulatta	89.70	0.00e+00	1040.00
IUUC-Meu-056372	Macropus eugenii	96.46	2.00e-128	452.00
IUUC-Mga-059665	Meleagris gallopavo	91.13	0.00e+00	924.00
IUUC-Mmr-061643	Microcebus murinus	89.88	0.00e+00	1039.00
IUUC-Mdo-062624	Monodelphis domestica	89.26	0.00e+00	1046.00
IUUC-Mmu-064210	Mus musculus	90.40	0.00e+00	1066.00
IUUC-Mpu-066292	Mustela putorius furo	89.84	0.00e+00	997.00
IUUC-Mlu-066952	Myotis lucifugus	90.23	0.00e+00	1040.00
IUUC-Nle-069002	Nomascus leucogenys	89.70	0.00e+00	1040.00
IUUC-Opr-070405	Ochotona princeps	83.07	0.00e+00	967.00
IUUC-Ont-071487	Oreochromis niloticus	91.10	0.00e+00	1082.00
IUUC-Oan-073274	Ornithorhynchus anatinus	90.89	0.00e+00	940.00
IUUC-Ocu-074788	Oryctolagus cuniculus	90.05	0.00e+00	1038.00
IUUC-Ola-086339	Oryzias latipes	88.91	0.00e+00	1061.00
IUUC-Oga-089037	Otolemur garnettii	89.88	0.00e+00	1038.00
IUUC-Oar-089458	Ovis aries	90.16	0.00e+00	1018.00
IUUC-Pan-092120	Papio anubis	89.08	0.00e+00	1025.00
IUUC-Psi-093157	Pelodiscus sinensis	88.50	0.00e+00	1058.00
IUUC-Pfo-096904	Poecilia formosa	90.23	0.00e+00	1076.00
IUUC-Pab-098358	Pongo abelii	89.70	0.00e+00	1040.00
IUUC-Pva-102674	Pteropus vampyrus	88.66	0.00e+00	1021.00
IUUC-Rno-105352	Rattus norvegicus	90.23	0.00e+00	1065.00
IUUC-Sha-106532	Sarcophilus harrisii	77.69	6.00e-49	185.00
IUUC-Sar-113483	Sorex araneus	85.82	6.00e-131	461.00
IUUC-Ssc-116170	Sus scrofa	90.05	0.00e+00	1040.00
IUUC-Tgu-116968	Taeniopygia guttata	91.96	0.00e+00	1051.00
IUUC-Tru-118246	Takifugu rubripes	89.96	0.00e+00	1060.00
IUUC-Tni-120692	Tetraodon nigroviridis	90.89	0.00e+00	1041.00
IUUC-Ttr-128956	Tursiops truncatus	90.40	0.00e+00	1041.00
IUUC-Vpa-130291	Vicugna pacos	84.64	0.00e+00	988.00
IUUC-Xtr-132331	Xenopus tropicalis	90.47	0.00e+00	909.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence