iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mlu-067029

Ensembl Protein ID

ENSMLUP00000001653.2

UniProt Accession

G1NWF0; G1NWF0_MYOLU

Genbank Protein ID

ENSMLUP00000001653

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAPE02048836

Gene Name

CDC40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMLUG00000001809.2	ENSMLUT00000001812.2	ENSMLUP00000001653.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.40e-31	104.6	329	366
UBD/Beta-Prp	3.80e-46	157.7	278	447

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd..tllvsGsdDgtikvWDlrtgvll 36
           gH+  v++++f++  t ++s+++D  +k+WD+ tg ++
   Q: 329  GHSKAVRDICFNTagTQFLSAAYDRYLKLWDTETGQCI 366
           8**********444699******************996 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdlet.gqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkl 171
           k++h+++gh++ v +++++p sg+ l+s s d  i++w++   + cl+ t+ gh+++v+ ++++  g  + s+++Dr ++lWd +tg++
   Q: 278  KQIHVWSGHTKGVSAVRLFPlSGHLLLSCSMDCKIKLWEVYGdRRCLR-TFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQC 365
           899*****************999****************975156776.**************************************** PP
   S: 172  lrtltgghtdsvyslsfdsng...kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW..d 250
           + ++t  + +  y+++f+++    + +v+g  d+++  wd+++ge+v+++  h   v+ + f +++ r+vs+s+D+s+r+W  d
   Q: 366  ISRFT--NRKVPYCVKFNPDEdkqNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWewD 447
           ****8..588889***999988889*******************************************************9444 PP

Organism

Myotis lucifugus

Protein Sequence
(Fasta)

MSAAIAALAA SYGSGSGSES DSDSEGGRCP LPAADSLMHL TKSPSAKPSL AVAVDAAPEV 60
AVKEDLETGV HLDPAVKEVQ YNPTYETMFA PEFGPENPFR TQQMAAPRNM LSGYAEPAHI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGGCTG CGATTGCAGC TCTGGCTGCT TCCTACGGTT CGGGTTCAGG GTCCGAATCG 60
GACTCGGACA GTGAGGGCGG ACGGTGTCCA CTGCCAGCGG CGGACTCCCT CATGCACTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0003723--F:RNA binding
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	50.00	1.00e-143	503.00
IUUC-Aml-002243	Ailuropoda melanoleuca	98.10	0.00e+00	803.00
IUUC-Atr-002502	Amborella trichopoda	51.23	6.00e-154	537.00
IUUC-Apl-003885	Anas platyrhynchos	94.65	0.00e+00	1019.00
IUUC-Aca-004854	Anolis carolinensis	69.47	0.00e+00	741.00
IUUC-Aly-006158	Arabidopsis lyrata	49.12	4.00e-155	541.00
IUUC-Ath-007474	Arabidopsis thaliana	52.16	2.00e-155	542.00
IUUC-Ago-007726	Ashbya gossypii	36.83	1.00e-69	256.00
IUUC-Acl-008220	Aspergillus clavatus	44.01	1.00e-133	470.00
IUUC-Afl-008473	Aspergillus flavus	43.49	7.00e-131	461.00
IUUC-Afu-008773	Aspergillus fumigatus	43.76	6.00e-132	464.00
IUUC-Ani-009323	Aspergillus nidulans	43.71	2.00e-118	419.00
IUUC-Ang-009851	Aspergillus niger	43.50	3.00e-132	465.00
IUUC-Aor-009950	Aspergillus oryzae	43.49	7.00e-131	461.00
IUUC-Ate-010372	Aspergillus terreus	43.89	1.00e-133	469.00
IUUC-Ame-011660	Astyanax mexicanus	85.19	0.00e+00	975.00
IUUC-Bgr-012230	Blumeria graminis	44.53	4.00e-126	444.00
IUUC-Bta-012568	Bos taurus	98.55	0.00e+00	1084.00
IUUC-Bci-013646	Botrytis cinerea	43.08	3.00e-122	431.00
IUUC-Bdi-014199	Brachypodium distachyon	50.48	4.00e-145	508.00
IUUC-Bol-015695	Brassica oleracea	51.89	3.00e-161	561.00
IUUC-Bra-017923	Brassica rapa	52.18	2.00e-161	561.00
IUUC-Cel-018535	Caenorhabditis elegans	51.72	3.00e-178	618.00
IUUC-Cja-019071	Callithrix jacchus	98.19	0.00e+00	1085.00
IUUC-Cfa-020559	Canis familiaris	98.55	0.00e+00	1082.00
IUUC-Cpo-022356	Cavia porcellus	98.37	0.00e+00	1087.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	44.02	3.00e-77	281.00
IUUC-Csa-023125	Chlorocebus sabaeus	98.37	0.00e+00	1087.00
IUUC-Cho-024676	Choloepus hoffmanni	90.31	0.00e+00	944.00
IUUC-Cin-025229	Ciona intestinalis	71.03	0.00e+00	765.00
IUUC-Csv-025868	Ciona savignyi	70.53	2.00e-40	155.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	41.12	5.00e-108	384.00
IUUC-Cne-026885	Cryptococcus neoformans	52.13	2.00e-153	536.00
IUUC-Dre-027631	Danio rerio	84.62	0.00e+00	979.00
IUUC-Dno-029815	Dasypus novemcinctus	88.15	0.00e+00	1001.00
IUUC-Dor-031143	Dipodomys ordii	83.51	0.00e+00	909.00
IUUC-Dse-031520	Dothistroma septosporum	39.06	1.00e-96	347.00
IUUC-Dme-032050	Drosophila melanogaster	62.77	0.00e+00	749.00
IUUC-Ete-032866	Echinops telfairi	95.47	0.00e+00	1052.00
IUUC-Eca-033384	Equus caballus	98.91	0.00e+00	1085.00
IUUC-Eeu-034471	Erinaceus europaeus	83.70	0.00e+00	843.00
IUUC-Fca-035727	Felis catus	98.55	0.00e+00	1086.00
IUUC-Fal-036774	Ficedula albicollis	95.40	0.00e+00	1032.00
IUUC-Fox-037951	Fusarium oxysporum	42.96	3.00e-127	448.00
IUUC-Fso-038287	Fusarium solani	43.77	1.00e-124	439.00
IUUC-Gmo-039670	Gadus morhua	82.27	0.00e+00	947.00
IUUC-Ggr-039764	Gaeumannomyces graminis	39.93	3.00e-116	412.00
IUUC-Gga-040293	Gallus gallus	95.74	0.00e+00	1032.00
IUUC-Gac-042159	Gasterosteus aculeatus	84.70	0.00e+00	975.00
IUUC-Gma-044299	Glycine max	63.64	4.00e-137	481.00
IUUC-Ggo-044864	Gorilla gorilla	98.19	0.00e+00	1086.00
IUUC-Hsa-046602	Homo sapiens	98.19	0.00e+00	1086.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	99.04	0.00e+00	818.00
IUUC-Kpa-049318	Komagataella pastoris	45.85	2.00e-96	345.00
IUUC-Lch-049796	Latimeria chalumnae	75.27	0.00e+00	842.00
IUUC-Lpe-051153	Leersia perrieri	50.46	3.00e-147	514.00
IUUC-Loc-052467	Lepisosteus oculatus	87.18	0.00e+00	992.00
IUUC-Lma-053107	Leptosphaeria maculans	48.16	1.00e-112	400.00
IUUC-Laf-053787	Loxodonta africana	97.65	0.00e+00	1108.00
IUUC-Mcc-055706	Macaca mulatta	98.55	0.00e+00	1088.00
IUUC-Meu-056757	Macropus eugenii	80.68	0.00e+00	637.00
IUUC-Mor-057079	Magnaporthe oryzae	38.57	7.00e-115	407.00
IUUC-Mpo-057533	Magnaporthe poae	51.00	4.00e-112	398.00
IUUC-Mtr-057950	Medicago truncatula	46.97	2.00e-149	522.00
IUUC-Mla-058910	Melampsora laricipopulina	47.19	4.00e-148	518.00
IUUC-Mga-059366	Meleagris gallopavo	95.19	0.00e+00	1030.00
IUUC-Mvi-060349	Microbotryum violaceum	58.69	1.00e-136	480.00
IUUC-Mmr-061209	Microcebus murinus	98.73	0.00e+00	1120.00
IUUC-Mdo-062118	Monodelphis domestica	95.65	0.00e+00	1096.00
IUUC-Mmu-063173	Mus musculus	98.55	0.00e+00	1087.00
IUUC-Mac-065080	Musa acuminata	49.73	4.00e-153	535.00
IUUC-Mpu-066659	Mustela putorius furo	98.37	0.00e+00	1084.00
IUUC-Nfi-068334	Neosartorya fischeri	45.32	3.00e-133	468.00
IUUC-Ncr-068675	Neurospora crassa	38.84	3.00e-104	372.00
IUUC-Nle-070113	Nomascus leucogenys	97.46	0.00e+00	1082.00
IUUC-Opr-070685	Ochotona princeps	90.22	0.00e+00	1030.00
IUUC-Ont-071680	Oreochromis niloticus	84.28	0.00e+00	972.00
IUUC-Oan-073573	Ornithorhynchus anatinus	96.88	0.00e+00	957.00
IUUC-Ocu-074074	Oryctolagus cuniculus	98.55	0.00e+00	1122.00
IUUC-Oba-075625	Oryza barthii	50.18	3.00e-147	514.00
IUUC-Obr-076510	Oryza brachyantha	49.38	6.00e-147	514.00
IUUC-Ogl-077275	Oryza glaberrima	50.18	3.00e-147	514.00
IUUC-Ogu-078563	Oryza glumaepatula	50.18	4.00e-147	514.00
IUUC-Oin-079898	Oryza indica	63.45	2.00e-134	472.00
IUUC-Olo-081080	Oryza longistaminata	52.12	2.00e-141	495.00
IUUC-Oni-083121	Oryza nivara	50.36	3.00e-147	515.00
IUUC-Opu-083329	Oryza punctata	49.91	2.00e-146	512.00
IUUC-Oru-084807	Oryza rufipogon	49.80	1.00e-128	453.00
IUUC-Osa-086039	Oryza sativa	50.45	7.00e-148	517.00
IUUC-Ola-087149	Oryzias latipes	83.91	0.00e+00	970.00
IUUC-Olu-087627	Ostreococcus lucimarinus	43.82	3.00e-122	432.00
IUUC-Oga-088359	Otolemur garnettii	98.55	0.00e+00	1085.00
IUUC-Oar-089390	Ovis aries	98.55	0.00e+00	1081.00
IUUC-Ptr-090894	Pan troglodytes	98.19	0.00e+00	1086.00
IUUC-Pan-092476	Papio anubis	98.55	0.00e+00	1088.00
IUUC-Psi-093527	Pelodiscus sinensis	93.12	0.00e+00	978.00
IUUC-Pno-094771	Phaeosphaeria nodorum	46.83	3.00e-112	398.00
IUUC-Ppa-095386	Physcomitrella patens	50.57	3.00e-155	541.00
IUUC-Pfo-096139	Poecilia formosa	85.56	0.00e+00	982.00
IUUC-Pab-097838	Pongo abelii	98.38	0.00e+00	962.00
IUUC-Pop-098945	Populus trichocarpa	51.60	6.00e-153	534.00
IUUC-Pca-100876	Procavia capensis	82.61	0.00e+00	925.00
IUUC-Ppe-101777	Prunus persica	50.94	4.00e-151	528.00
IUUC-Pva-102418	Pteropus vampyrus	98.19	0.00e+00	1081.00
IUUC-Pgr-103456	Puccinia graminis	50.55	8.00e-159	553.00
IUUC-Ptt-103731	Puccinia triticina	46.57	1.00e-144	506.00
IUUC-Pte-104386	Pyrenophora teres	49.88	6.00e-114	404.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	50.49	7.00e-114	404.00
IUUC-Rno-105694	Rattus norvegicus	94.02	0.00e+00	1016.00
IUUC-Sce-106339	Saccharomyces cerevisiae	39.10	8.00e-76	277.00
IUUC-Sha-106709	Sarcophilus harrisii	95.83	0.00e+00	1094.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	40.96	2.00e-125	442.00
IUUC-Spo-108331	Schizosaccharomyces pombe	43.01	2.00e-123	436.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	46.20	1.00e-116	413.00
IUUC-Smo-109326	Selaginella moellendorffii	44.84	5.00e-127	447.00
IUUC-Sit-110446	Setaria italica	50.29	3.00e-145	508.00
IUUC-Sly-111330	Solanum lycopersicum	48.78	5.00e-152	531.00
IUUC-Stu-112610	Solanum tuberosum	48.43	5.00e-151	528.00
IUUC-Sar-113065	Sorex araneus	78.33	4.00e-124	437.00
IUUC-Sbi-114005	Sorghum bicolor	64.04	4.00e-136	478.00
IUUC-Sre-114988	Sporisorium reilianum	49.81	8.00e-158	550.00
IUUC-Ssc-115760	Sus scrofa	98.91	0.00e+00	1090.00
IUUC-Tgu-116493	Taeniopygia guttata	95.94	0.00e+00	1039.00
IUUC-Tru-118489	Takifugu rubripes	82.05	0.00e+00	951.00
IUUC-Tsy-119332	Tarsius syrichta	98.19	0.00e+00	1119.00
IUUC-Tni-120202	Tetraodon nigroviridis	77.96	0.00e+00	875.00
IUUC-Tca-121429	Theobroma cacao	49.81	4.00e-151	528.00
IUUC-Tre-122162	Trichoderma reesei	43.49	3.00e-125	441.00
IUUC-Tvi-122500	Trichoderma virens	43.44	4.00e-123	434.00
IUUC-Tae-125557	Triticum aestivum	48.71	3.00e-143	501.00
IUUC-Tur-126554	Triticum urartu	48.61	2.00e-141	495.00
IUUC-Tme-126919	Tuber melanosporum	45.22	2.00e-139	489.00
IUUC-Tbe-127968	Tupaia belangeri	93.12	0.00e+00	1044.00
IUUC-Ttr-129215	Tursiops truncatus	98.19	0.00e+00	1075.00
IUUC-Uma-129622	Ustilago maydis	49.19	8.00e-160	557.00
IUUC-Vda-129750	Verticillium dahliae	44.32	2.00e-124	439.00
IUUC-Vpa-130617	Vicugna pacos	95.93	0.00e+00	971.00
IUUC-Vvi-131238	Vitis vinifera	61.81	2.00e-134	472.00
IUUC-Xtr-131865	Xenopus tropicalis	90.07	0.00e+00	1006.00
IUUC-Xma-133627	Xiphophorus maculatus	85.74	0.00e+00	985.00
IUUC-Yli-134390	Yarrowia lipolytica	45.96	1.00e-116	413.00
IUUC-Zma-135925	Zea mays	50.67	4.00e-141	494.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence