iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112610

Ensembl Protein ID

PGSC0003DMT400057595

UniProt Accession

M1C1C3; M1C1C3_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400022364	PGSC0003DMT400057595	PGSC0003DMT400057595

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.20e-24	84.1	287	319
UBD/Beta-Prp	6.80e-44	151.5	277	494

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDl 30
           gHt +v++++f   +++l++s++ D ++k+WD+
   Q: 287  GHTKGVSAIRFfpkHGHLILSAGMDTKVKIWDV 319
           8*********99754489**************7 PP

UBD/Beta-Prp

   S: 40   ttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwd.lstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletg 126
            ++ l+++ sgh+++v+a++f p+   ++++++ D  +k+wd +++gkc++t+ gh++ v+++ fs +g+k+++++ d++i+ wd+etg
   Q: 277  IPKRLVHTWSGHTKGVSAIRFFPKHGhLILSAGMDTKVKIWDvYNSGKCMRTYMGHTKAVRDIWFSNDGSKFLTAGYDKYIKYWDTETG 365
           567899**************9887666**************72569******************************************* PP
   S: 127  qcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec 214
           q+++++ +g+   v  ++ ++d+ n+l +G+ D+++  Wd+++g++ ++  + h ++v+ ++f +n +++v+ s+d+++++w++    +
   Q: 366  QVIQTFTTGKIPYVVRLNPDEDKqNVLLAGMSDKKIVQWDINSGQITQEYDQ-HLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVV 453
           ****99999999999999999999**************************98.********************************8877 PP
   S: 215  vrtlng.htdnvksvrfspnderlvsgssDgsiriWdlrsg 254
           ++   + h   + s+  +pn+++++  s D++i i+ +r +
   Q: 454  IKYISEpHMHSMPSISPHPNGNWIAAQSLDNQILIYSTRER 494
           7666556*****************************77665 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MDLLRSYAED DGIANPNSQS SPDSSPIRML PSKSAAPKVD DTMLALTVAG EAARAQSKPL 60
DPTQHLVGFN PTYEQLWAPI CGPAHPYAKD GLAQGLRNHK LGFVEDASIE PFVFDEQYNT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGTCTAGA TTTTGGGAAA ATATAGTCTC AGCTACAACA CTTTGATTAT TACTCAATAT 60
TTCCGATTTT CACAGTATCT GTAAATCCCT AATGGACCTA TTGCGATCCT ACGCCGAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

sot:102585703

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	67.64	0.00e+00	773.00
IUUC-Aml-002243	Ailuropoda melanoleuca	46.52	5.00e-96	343.00
IUUC-Atr-002502	Amborella trichopoda	75.63	0.00e+00	874.00
IUUC-Apl-003885	Anas platyrhynchos	51.02	5.00e-153	533.00
IUUC-Aca-004854	Anolis carolinensis	35.49	4.00e-89	320.00
IUUC-Aly-006158	Arabidopsis lyrata	78.79	0.00e+00	910.00
IUUC-Ath-007474	Arabidopsis thaliana	77.24	0.00e+00	877.00
IUUC-Ago-007726	Ashbya gossypii	39.00	5.00e-70	257.00
IUUC-Acl-008220	Aspergillus clavatus	51.30	4.00e-110	390.00
IUUC-Afl-008473	Aspergillus flavus	39.17	5.00e-117	413.00
IUUC-Afu-008773	Aspergillus fumigatus	41.90	1.00e-119	422.00
IUUC-Ani-009323	Aspergillus nidulans	40.16	8.00e-104	369.00
IUUC-Ang-009851	Aspergillus niger	51.59	3.00e-111	394.00
IUUC-Aor-009950	Aspergillus oryzae	39.17	5.00e-117	413.00
IUUC-Ate-010372	Aspergillus terreus	52.16	3.00e-111	394.00
IUUC-Ame-011660	Astyanax mexicanus	49.63	5.00e-153	533.00
IUUC-Bgr-012230	Blumeria graminis	39.96	2.00e-109	387.00
IUUC-Bta-012568	Bos taurus	50.56	3.00e-152	530.00
IUUC-Bci-013646	Botrytis cinerea	53.92	3.00e-110	390.00
IUUC-Bdi-014199	Brachypodium distachyon	69.24	0.00e+00	778.00
IUUC-Bol-015695	Brassica oleracea	77.76	0.00e+00	905.00
IUUC-Bra-017923	Brassica rapa	78.07	0.00e+00	919.00
IUUC-Cel-018535	Caenorhabditis elegans	39.02	8.00e-125	439.00
IUUC-Cja-019071	Callithrix jacchus	50.56	5.00e-152	530.00
IUUC-Cfa-020559	Canis familiaris	50.56	4.00e-152	530.00
IUUC-Cpo-022356	Cavia porcellus	50.37	1.00e-151	528.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	50.58	9.00e-94	335.00
IUUC-Csa-023125	Chlorocebus sabaeus	50.56	4.00e-152	530.00
IUUC-Cho-024676	Choloepus hoffmanni	47.57	2.00e-141	494.00
IUUC-Cin-025229	Ciona intestinalis	48.49	2.00e-145	507.00
IUUC-Csv-025868	Ciona savignyi	66.30	5.00e-37	144.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	47.67	7.00e-97	346.00
IUUC-Cne-026885	Cryptococcus neoformans	47.66	4.00e-134	470.00
IUUC-Dre-027631	Danio rerio	50.65	3.00e-158	550.00
IUUC-Dno-029815	Dasypus novemcinctus	50.28	1.00e-149	522.00
IUUC-Dor-031143	Dipodomys ordii	61.61	3.00e-130	457.00
IUUC-Dse-031520	Dothistroma septosporum	48.74	1.00e-98	352.00
IUUC-Dme-032050	Drosophila melanogaster	46.00	4.00e-146	510.00
IUUC-Ete-032866	Echinops telfairi	49.25	2.00e-145	508.00
IUUC-Eca-033384	Equus caballus	50.37	2.00e-150	524.00
IUUC-Eeu-034471	Erinaceus europaeus	39.62	2.00e-100	358.00
IUUC-Fca-035727	Felis catus	48.69	1.00e-152	531.00
IUUC-Fal-036774	Ficedula albicollis	50.93	2.00e-155	541.00
IUUC-Fox-037951	Fusarium oxysporum	50.27	7.00e-110	389.00
IUUC-Fso-038287	Fusarium solani	52.65	4.00e-109	387.00
IUUC-Gmo-039670	Gadus morhua	48.79	8.00e-158	549.00
IUUC-Ggr-039764	Gaeumannomyces graminis	50.14	2.00e-105	375.00
IUUC-Gga-040293	Gallus gallus	51.12	9.00e-156	542.00
IUUC-Gac-042159	Gasterosteus aculeatus	47.87	6.00e-157	546.00
IUUC-Gma-044299	Glycine max	80.99	0.00e+00	842.00
IUUC-Ggo-044864	Gorilla gorilla	50.56	3.00e-152	530.00
IUUC-Hsa-046602	Homo sapiens	50.56	3.00e-152	530.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	58.66	7.00e-136	475.00
IUUC-Kpa-049318	Komagataella pastoris	46.08	3.00e-90	324.00
IUUC-Lch-049796	Latimeria chalumnae	41.87	7.00e-125	439.00
IUUC-Lpe-051153	Leersia perrieri	70.62	0.00e+00	791.00
IUUC-Loc-052467	Lepisosteus oculatus	49.35	1.00e-153	535.00
IUUC-Lma-053107	Leptosphaeria maculans	52.12	2.00e-111	394.00
IUUC-Laf-053787	Loxodonta africana	48.87	3.00e-155	540.00
IUUC-Mcc-055706	Macaca mulatta	50.56	4.00e-152	530.00
IUUC-Meu-056757	Macropus eugenii	59.40	1.00e-116	412.00
IUUC-Mor-057079	Magnaporthe oryzae	49.05	2.00e-106	378.00
IUUC-Mpo-057533	Magnaporthe poae	50.00	5.00e-106	376.00
IUUC-Mtr-057950	Medicago truncatula	78.61	0.00e+00	911.00
IUUC-Mla-058910	Melampsora laricipopulina	59.02	4.00e-133	467.00
IUUC-Mga-059366	Meleagris gallopavo	51.12	2.00e-155	541.00
IUUC-Mvi-060349	Microbotryum violaceum	56.64	1.00e-126	445.00
IUUC-Mmr-061209	Microcebus murinus	50.75	4.00e-156	543.00
IUUC-Mdo-062118	Monodelphis domestica	50.37	7.00e-156	542.00
IUUC-Mmu-063173	Mus musculus	49.46	2.00e-152	531.00
IUUC-Mac-065109	Musa acuminata	89.61	0.00e+00	659.00
IUUC-Mpu-066659	Mustela putorius furo	50.56	1.00e-152	531.00
IUUC-Mlu-067029	Myotis lucifugus	50.84	1.00e-152	531.00
IUUC-Nfi-068334	Neosartorya fischeri	42.83	2.00e-121	428.00
IUUC-Ncr-068675	Neurospora crassa	46.65	1.00e-91	329.00
IUUC-Nle-070113	Nomascus leucogenys	50.56	1.00e-152	531.00
IUUC-Opr-070685	Ochotona princeps	60.22	4.00e-140	490.00
IUUC-Ont-071680	Oreochromis niloticus	49.82	1.00e-156	545.00
IUUC-Oan-073573	Ornithorhynchus anatinus	49.21	8.00e-141	492.00
IUUC-Ocu-074074	Oryctolagus cuniculus	50.75	1.00e-155	542.00
IUUC-Oba-075625	Oryza barthii	71.35	0.00e+00	802.00
IUUC-Obr-076510	Oryza brachyantha	69.52	0.00e+00	801.00
IUUC-Ogl-077275	Oryza glaberrima	71.35	0.00e+00	802.00
IUUC-Ogu-078563	Oryza glumaepatula	71.35	0.00e+00	802.00
IUUC-Oin-079898	Oryza indica	79.70	0.00e+00	670.00
IUUC-Olo-081080	Oryza longistaminata	71.37	0.00e+00	718.00
IUUC-Oni-083121	Oryza nivara	71.35	0.00e+00	803.00
IUUC-Opu-083329	Oryza punctata	71.33	0.00e+00	794.00
IUUC-Oru-084807	Oryza rufipogon	70.23	0.00e+00	708.00
IUUC-Osa-086039	Oryza sativa	71.40	0.00e+00	805.00
IUUC-Ola-087149	Oryzias latipes	49.73	3.00e-158	550.00
IUUC-Olu-087627	Ostreococcus lucimarinus	47.88	4.00e-140	490.00
IUUC-Oga-088359	Otolemur garnettii	50.56	3.00e-152	530.00
IUUC-Oar-089390	Ovis aries	50.56	5.00e-152	530.00
IUUC-Ptr-090894	Pan troglodytes	50.56	3.00e-152	530.00
IUUC-Pan-092476	Papio anubis	50.56	4.00e-152	530.00
IUUC-Psi-093527	Pelodiscus sinensis	47.26	8.00e-139	486.00
IUUC-Pno-094771	Phaeosphaeria nodorum	50.98	4.00e-110	390.00
IUUC-Ppa-095386	Physcomitrella patens	72.73	0.00e+00	839.00
IUUC-Pfo-096139	Poecilia formosa	48.86	4.00e-157	546.00
IUUC-Pab-097838	Pongo abelii	49.16	2.00e-128	451.00
IUUC-Pop-099962	Populus trichocarpa	82.50	0.00e+00	913.00
IUUC-Pca-100876	Procavia capensis	52.15	5.00e-115	407.00
IUUC-Ppe-101777	Prunus persica	82.91	0.00e+00	898.00
IUUC-Pva-102418	Pteropus vampyrus	48.52	9.00e-152	529.00
IUUC-Pgr-103456	Puccinia graminis	48.99	4.00e-143	500.00
IUUC-Ptt-103731	Puccinia triticina	45.15	2.00e-130	458.00
IUUC-Pte-104386	Pyrenophora teres	51.27	2.00e-108	384.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	51.27	4.00e-108	384.00
IUUC-Rno-105694	Rattus norvegicus	47.29	7.00e-144	502.00
IUUC-Sce-106339	Saccharomyces cerevisiae	36.68	9.00e-74	269.00
IUUC-Sha-106709	Sarcophilus harrisii	50.37	1.00e-154	538.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	38.14	3.00e-108	384.00
IUUC-Spo-108331	Schizosaccharomyces pombe	49.42	4.00e-103	367.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	53.99	1.00e-98	352.00
IUUC-Smo-109326	Selaginella moellendorffii	61.28	0.00e+00	658.00
IUUC-Sit-110446	Setaria italica	71.30	0.00e+00	778.00
IUUC-Sly-111330	Solanum lycopersicum	99.28	0.00e+00	1046.00
IUUC-Sar-113065	Sorex araneus	42.69	2.00e-34	139.00
IUUC-Sbi-114005	Sorghum bicolor	71.35	0.00e+00	759.00
IUUC-Sre-114988	Sporisorium reilianum	45.36	1.00e-134	472.00
IUUC-Ssc-115760	Sus scrofa	48.69	3.00e-152	530.00
IUUC-Tgu-116493	Taeniopygia guttata	50.94	4.00e-157	546.00
IUUC-Tru-118489	Takifugu rubripes	49.72	4.00e-155	540.00
IUUC-Tsy-119332	Tarsius syrichta	48.87	2.00e-156	544.00
IUUC-Tni-120202	Tetraodon nigroviridis	46.30	8.00e-147	512.00
IUUC-Tca-121429	Theobroma cacao	81.06	0.00e+00	926.00
IUUC-Tre-122162	Trichoderma reesei	53.49	2.00e-111	394.00
IUUC-Tvi-122500	Trichoderma virens	53.49	1.00e-111	395.00
IUUC-Tae-125557	Triticum aestivum	68.90	0.00e+00	783.00
IUUC-Tur-126554	Triticum urartu	68.97	0.00e+00	780.00
IUUC-Tme-126919	Tuber melanosporum	41.46	7.00e-125	439.00
IUUC-Tbe-127968	Tupaia belangeri	45.90	4.00e-141	493.00
IUUC-Ttr-129215	Tursiops truncatus	50.37	2.00e-150	524.00
IUUC-Uma-129622	Ustilago maydis	45.65	6.00e-136	476.00
IUUC-Vda-129750	Verticillium dahliae	52.91	6.00e-111	393.00
IUUC-Vpa-130617	Vicugna pacos	50.56	1.00e-146	511.00
IUUC-Vvi-131238	Vitis vinifera	81.08	0.00e+00	904.00
IUUC-Xtr-131865	Xenopus tropicalis	48.07	4.00e-154	536.00
IUUC-Xma-133627	Xiphophorus maculatus	48.69	4.00e-156	543.00
IUUC-Yli-134390	Yarrowia lipolytica	51.29	5.00e-104	370.00
IUUC-Zma-135925	Zea mays	71.84	0.00e+00	765.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence