iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076535

Ensembl Protein ID

OB01G28790.1

UniProt Accession

J3L0X3; J3L0X3_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB01G28790	OB01G28790.1	OB01G28790.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.30e-12	47.1	1051	1096

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           C vC++  +d+   + C+ C+e++H  C  +   ++ p+ + w+C++C 
   Q: 1051 CRVCHSDRDDD-LTILCDGCDEAYHLYCITPR-RSSIPKGK-WYCSSCA 1096
           ******99987.799*****************.*******7.******7 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MDVDKDKGNE KVHFRDSSSQ ETLRTYKRRR QPEPEPQHQP QPQPEPEPQQ QQQQHPELEP 60
KTEDVPAQQV TETFWKSRDI GWKHGIMIDE NRQHWKCMYC HLTRYGGGVS RLKRHLAGDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGTTG ACAAGGACAA AGGGAATGAG AAGGTGCATT TCAGGGATTC CTCGTCGCAG 60
GAGACTCTGC GAACCTACAA GAGGCGCCGG CAACCAGAGC CGGAGCCGCA GCATCAGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR003656--Znf_BED
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50808--ZF_BED
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD
PF02892--zf-BED

SMART

SM00249--PHD

Gene Ontology

GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000089	Aegilops tauschii	54.69	0.00e+00	795.00
IUUC-Bdi-014359	Brachypodium distachyon	59.24	0.00e+00	935.00
IUUC-Bol-016145	Brassica oleracea	31.68	8.00e-51	193.00
IUUC-Cin-025168	Ciona intestinalis	41.10	3.00e-12	64.30
IUUC-Csv-026070	Ciona savignyi	35.48	6.00e-12	64.30
IUUC-Hvu-047708	Hordeum vulgare	61.03	0.00e+00	667.00
IUUC-Lpe-051599	Leersia perrieri	74.46	0.00e+00	1675.00
IUUC-Oba-075869	Oryza barthii	80.26	0.00e+00	1800.00
IUUC-Ogl-077688	Oryza glaberrima	81.32	2.00e-176	610.00
IUUC-Ogu-078065	Oryza glumaepatula	80.91	0.00e+00	1813.00
IUUC-Oin-079589	Oryza indica	79.15	0.00e+00	1730.00
IUUC-Olo-081075	Oryza longistaminata	78.85	0.00e+00	1512.00
IUUC-Oni-082357	Oryza nivara	80.63	0.00e+00	1782.00
IUUC-Opu-083175	Oryza punctata	77.15	0.00e+00	1780.00
IUUC-Oru-085009	Oryza rufipogon	78.73	0.00e+00	1761.00
IUUC-Sit-110347	Setaria italica	57.10	0.00e+00	1193.00
IUUC-Sbi-114812	Sorghum bicolor	55.19	0.00e+00	1204.00
IUUC-Tae-125487	Triticum aestivum	60.88	0.00e+00	921.00
IUUC-Tur-126568	Triticum urartu	53.60	0.00e+00	784.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence