iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076379

Ensembl Protein ID

OB01G48350.1

UniProt Accession

J3L6H9; J3L6H9_ORYBR

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB01G48350	OB01G48350.1	OB01G48350.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.30e-28	97.3	224	296

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+Cp+slelM+dPv+++sG+ty+   I+kw++ g + cP+trq+l +++l+Pn t+++li++wce +++
   Q: 224  IPADFCCPLSLELMSDPVIVASGQTYEHVFIRKWFDLGYNICPKTRQTLGHTKLIPNFTVKQLIENWCEIHGI 296
           8*******************************************************************98875 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MDSVSLSLLD SISNFRLLSS SNASKTELVK KYCQTIDGIL DHMEMALNRT FPQITPDDEL 60
SKVLEEFGAT INEASELVGD WNQMMSKIYF VIQVESIITK MQICVSELCQ IVNSLMPIES 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGAAAGCTT GCGCCCGACG CCACCGCCTC CGCCTCCCTC CGTTGGAGGC CTCTCCGAGG 60
TAACGAGGTT TCCTCTTAGC CCGCGTGCGG TACGACGCCG TGCGTGCTGC GGTGGTGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

obr:102699354

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bra-018049	Brassica rapa	47.51	1.00e-172	599.00
IUUC-Csv-025821	Ciona savignyi	29.70	1.00e-10	61.60
IUUC-Ete-032470	Echinops telfairi	26.73	9.00e-11	61.60
IUUC-Lpe-051098	Leersia perrieri	84.69	0.00e+00	1294.00
IUUC-Oba-075779	Oryza barthii	84.78	0.00e+00	1363.00
IUUC-Ogl-077086	Oryza glaberrima	84.69	0.00e+00	1345.00
IUUC-Ogu-078798	Oryza glumaepatula	84.82	0.00e+00	1351.00
IUUC-Oin-079685	Oryza indica	84.53	0.00e+00	1359.00
IUUC-Olo-080718	Oryza longistaminata	81.97	0.00e+00	1280.00
IUUC-Oni-082536	Oryza nivara	84.78	0.00e+00	1362.00
IUUC-Opu-083410	Oryza punctata	86.04	0.00e+00	1353.00
IUUC-Oru-084460	Oryza rufipogon	84.91	0.00e+00	1362.00
IUUC-Osa-086040	Oryza sativa	84.82	0.00e+00	1349.00
IUUC-Pyt-104569	Pyrenophora triticirepentis	28.98	2.00e-15	76.60
IUUC-Sit-110210	Setaria italica	63.36	0.00e+00	897.00
IUUC-Sbi-113876	Sorghum bicolor	63.50	0.00e+00	886.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence