iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112889

Ensembl Protein ID

PGSC0003DMT400055829

UniProt Accession

M1BYM3; M1BYM3_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400021684	PGSC0003DMT400055829	PGSC0003DMT400055829

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.20e-09	37.6	42	101
E3 activity/RING/RING	1.00e-07	33.6	45	90

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwl....asggk..tcPvtrqplteedlvPn 58
            f C I l++ +dPvv+ +G+ y   +I kw+    as+++  +cPv+++++++++l+P 
   Q: 42   GFDCNICLDVVKDPVVTFCGHLYCWPCIYKWIqfqsASDHQkpQCPVCKAKVSQKELIPL 101
           599*****************************87663333377***************96 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw..pglknssskefrCPlCr 46
           C iCl+  kd p+v+ CgH+++  C++kw  +++  s  ++ +CP+C+
   Q: 45   CNICLDVVKD-PVVTFCGHLYCWPCIYKWiqFQSA-SDHQKPQCPVCK 90
           99********.999***************753333.4555568****7 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MALDLHFQEQ ITESTFNECR SSPSQKWKTL DDERDEDNRA SGFDCNICLD VVKDPVVTFC 60
GHLYCWPCIY KWIQFQSASD HQKPQCPVCK AKVSQKELIP LYGPGQATKP SEDDVTSKGM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAAGTTTTAT ACAGAATTTG GGATTTTTTG TTTTCAATTT TTCCCCTATT AGAGAAAAAA 60
ATTCAATAGT TCAGATAGAA CTAATGCAGT TTATGTACAT TGTAGTTATG CAGACTTATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

sot:102600790

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Csv-026245	Ciona savignyi	42.86	4.00e-09	53.90
IUUC-Mvi-060316	Microbotryum violaceum	54.24	4.00e-14	70.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence