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Tag Content
iUUCD ID IUUC-Aly-006342
Ensembl Protein ID fgenesh2_kg.8__1748__AT5G58230.1
UniProt Accession D7MPM0; D7MPM0_ARALL
Genbank Protein ID EFH40816.1
Protein Name Putative uncharacterized protein
Genbank Nucleotide ID GL348720
Gene Name MSI1; ARALYDRAFT_495932
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.8__1748__AT5G58230.1 fgenesh2_kg.8__1748__AT5G58230.1 fgenesh2_kg.8__1748__AT5G58230.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.70e-29 101.2 272 305
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H+ +v+claf   +++ +++Gs D+t+k++Dlr+
   Q: 272  HSMEVNCLAFnpfNEWVVATGSTDKTVKLFDLRK 305
           8889*******977799**************986 PP
   
Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MGKDEEEMRG EIEERLINEE YKIWKKNTPF LYDLIITHAL EWPSLTVEWL PDREEPSGKD 60
YSVQKMILGT HTSENEPNYL MLAQVQLPLD DTESEARQYD DDRSEFGGFG CATGKVQIIQ 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Aly-006342|E3,WD_repeat|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CAGAAACGGA AGCGAGAAGT TCCGACAATT TGTACACAAA AGAGATCTGT TTTAGGGTTT 60
TGCTTTGTTC TTGTGGCGGG AATAACAAAG ACATCGCCGA GATGGGGAAA GACGAAGAGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Aly-006342|E3,WD_repeat|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0009507--C:chloroplast
GO:0005677--C:chromatin silencing complex
GO:0043234--C:protein complex
GO:0008283--P:cell proliferation
GO:0009793--P:embryo development ending in seed dormancy
GO:0031507--P:heterochromatin assembly
GO:0048366--P:leaf development
GO:0009555--P:pollen development
GO:0045787--P:positive regulation of cell cycle
GO:0009909--P:regulation of flower development
GO:0006349--P:regulation of gene expression by genetic imprinting
GO:2000653--P:regulation of genetic imprinting
GO:0010214--P:seed coat development
GO:0010026--P:trichome differentiation
KEGG aly:ARALYDRAFT_495932
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000757 Aegilops tauschii 78.78 0.00e+00 663.00
IUUC-Aml-001256 Ailuropoda melanoleuca 67.00 8.00e-163 566.00
IUUC-Atr-003075 Amborella trichopoda 86.15 0.00e+00 763.00
IUUC-Apl-003952 Anas platyrhynchos 68.00 6.00e-166 576.00
IUUC-Aca-004508 Anolis carolinensis 68.00 5.00e-166 576.00
IUUC-Ath-006855 Arabidopsis thaliana 98.83 0.00e+00 850.00
IUUC-Ago-007892 Ashbya gossypii 35.38 2.00e-68 251.00
IUUC-Acl-008163 Aspergillus clavatus 48.42 2.00e-113 401.00
IUUC-Afl-008645 Aspergillus flavus 48.66 3.00e-113 400.00
IUUC-Afu-009091 Aspergillus fumigatus 48.18 2.00e-111 394.00
IUUC-Ani-009478 Aspergillus nidulans 45.37 2.00e-95 342.00
IUUC-Ang-009707 Aspergillus niger 48.18 5.00e-110 390.00
IUUC-Aor-010028 Aspergillus oryzae 48.66 3.00e-113 400.00
IUUC-Ate-010416 Aspergillus terreus 48.66 2.00e-114 405.00
IUUC-Ame-010598 Astyanax mexicanus 67.50 7.00e-164 569.00
IUUC-Bgr-012001 Blumeria graminis 45.00 3.00e-97 347.00
IUUC-Bta-012851 Bos taurus 68.00 4.00e-166 576.00
IUUC-Bci-013815 Botrytis cinerea 47.63 3.00e-113 401.00
IUUC-Bdi-014926 Brachypodium distachyon 87.14 0.00e+00 761.00
IUUC-Bol-015856 Brassica oleracea 93.72 0.00e+00 817.00
IUUC-Bra-016725 Brassica rapa 84.27 0.00e+00 761.00
IUUC-Cel-018587 Caenorhabditis elegans 60.60 1.00e-145 508.00
IUUC-Cja-019884 Callithrix jacchus 68.00 4.00e-166 576.00
IUUC-Cfa-020343 Canis familiaris 68.00 4.00e-166 576.00
IUUC-Cpo-021591 Cavia porcellus 68.00 4.00e-166 576.00
IUUC-Cre-022563 Chlamydomonas reinhardtii 69.08 2.00e-173 600.00
IUUC-Csa-023738 Chlorocebus sabaeus 67.25 2.00e-163 568.00
IUUC-Cho-024506 Choloepus hoffmanni 67.75 2.00e-164 571.00
IUUC-Cin-025589 Ciona intestinalis 64.15 2.00e-164 571.00
IUUC-Csv-026216 Ciona savignyi 64.49 9.00e-163 565.00
IUUC-Cgl-026564 Colletotrichum gloeosporioides 45.45 3.00e-106 377.00
IUUC-Cne-026792 Cryptococcus neoformans 50.13 1.00e-123 436.00
IUUC-Cme-027307 Cyanidioschyzon merolae 49.65 7.00e-121 426.00
IUUC-Dre-028742 Danio rerio 67.25 2.00e-163 568.00
IUUC-Dno-029114 Dasypus novemcinctus 68.00 4.00e-166 576.00
IUUC-Dor-030733 Dipodomys ordii 58.00 2.00e-133 468.00
IUUC-Dse-031282 Dothistroma septosporum 44.04 4.00e-96 344.00
IUUC-Dme-032126 Drosophila melanogaster 66.25 3.00e-163 567.00
IUUC-Ete-032731 Echinops telfairi 68.00 4.00e-166 576.00
IUUC-Eca-034138 Equus caballus 67.00 6.00e-163 566.00
IUUC-Eeu-034644 Erinaceus europaeus 62.78 1.00e-80 292.00
IUUC-Fca-036202 Felis catus 68.00 4.00e-166 576.00
IUUC-Fal-037084 Ficedula albicollis 68.00 6.00e-166 576.00
IUUC-Fox-037974 Fusarium oxysporum 47.16 7.00e-112 396.00
IUUC-Fso-038246 Fusarium solani 45.93 7.00e-101 359.00
IUUC-Gmo-038593 Gadus morhua 67.08 6.00e-164 569.00
IUUC-Ggr-039741 Gaeumannomyces graminis 47.78 7.00e-107 380.00
IUUC-Gga-040396 Gallus gallus 68.00 4.00e-166 576.00
IUUC-Gac-041389 Gasterosteus aculeatus 67.58 8.00e-164 568.00
IUUC-Gma-042791 Glycine max 89.78 0.00e+00 780.00
IUUC-Ggo-045422 Gorilla gorilla 62.96 7.00e-145 506.00
IUUC-Hsa-045683 Homo sapiens 68.00 4.00e-166 576.00
IUUC-Hvu-047457 Hordeum vulgare 88.06 5.00e-105 372.00
IUUC-Itr-047950 Ictidomys tridecemlineatus 68.00 4.00e-166 576.00
IUUC-Kpa-049119 Komagataella pastoris 37.23 3.00e-73 268.00
IUUC-Lch-050545 Latimeria chalumnae 67.75 4.00e-166 576.00
IUUC-Lpe-051337 Leersia perrieri 86.86 0.00e+00 759.00
IUUC-Loc-052473 Lepisosteus oculatus 67.50 9.00e-165 572.00
IUUC-Lma-053275 Leptosphaeria maculans 42.86 6.00e-66 243.00
IUUC-Laf-054114 Loxodonta africana 68.00 4.00e-166 576.00
IUUC-Mcc-055648 Macaca mulatta 68.00 5.00e-166 576.00
IUUC-Meu-056490 Macropus eugenii 68.00 4.00e-166 576.00
IUUC-Mor-056947 Magnaporthe oryzae 47.96 9.00e-106 376.00
IUUC-Mpo-057602 Magnaporthe poae 47.92 2.00e-107 381.00
IUUC-Mtr-057853 Medicago truncatula 89.39 0.00e+00 763.00
IUUC-Mla-058884 Melampsora laricipopulina 51.65 5.00e-122 430.00
IUUC-Mga-059452 Meleagris gallopavo 68.00 4.00e-166 577.00
IUUC-Mvi-060450 Microbotryum violaceum 53.87 2.00e-126 444.00
IUUC-Mmr-061008 Microcebus murinus 67.25 2.00e-163 568.00
IUUC-Mdo-062817 Monodelphis domestica 68.25 3.00e-166 577.00
IUUC-Mmu-063282 Mus musculus 68.00 4.00e-166 576.00
IUUC-Mac-065480 Musa acuminata 88.03 0.00e+00 766.00
IUUC-Mpu-066529 Mustela putorius furo 67.50 1.00e-164 572.00
IUUC-Mlu-068072 Myotis lucifugus 68.00 4.00e-166 576.00
IUUC-Nfi-068374 Neosartorya fischeri 48.18 4.00e-109 387.00
IUUC-Ncr-068794 Neurospora crassa 45.72 1.00e-107 382.00
IUUC-Nle-069577 Nomascus leucogenys 68.00 4.00e-166 576.00
IUUC-Opr-070245 Ochotona princeps 55.75 2.00e-125 441.00
IUUC-Ont-071809 Oreochromis niloticus 67.50 6.00e-164 569.00
IUUC-Oan-073579 Ornithorhynchus anatinus 68.00 2.00e-165 574.00
IUUC-Ocu-074778 Oryctolagus cuniculus 67.25 1.00e-163 568.00
IUUC-Oba-075719 Oryza barthii 75.42 0.00e+00 647.00
IUUC-Obr-076859 Oryza brachyantha 86.65 0.00e+00 753.00
IUUC-Ogl-077920 Oryza glaberrima 86.86 0.00e+00 756.00
IUUC-Ogu-078048 Oryza glumaepatula 75.42 0.00e+00 644.00
IUUC-Oin-079960 Oryza indica 72.53 7.00e-175 606.00
IUUC-Olo-080553 Oryza longistaminata 72.31 0.00e+00 631.00
IUUC-Ome-081835 Oryza meridionalis 86.86 0.00e+00 761.00
IUUC-Oni-082494 Oryza nivara 75.18 0.00e+00 640.00
IUUC-Opu-083913 Oryza punctata 83.21 0.00e+00 711.00
IUUC-Oru-084666 Oryza rufipogon 86.86 0.00e+00 756.00
IUUC-Osa-085884 Oryza sativa 86.86 0.00e+00 756.00
IUUC-Ola-086664 Oryzias latipes 67.50 7.00e-164 569.00
IUUC-Olu-087579 Ostreococcus lucimarinus 67.68 3.00e-160 557.00
IUUC-Oga-088364 Otolemur garnettii 64.52 3.00e-152 530.00
IUUC-Oar-089652 Ovis aries 68.00 4.00e-166 576.00
IUUC-Ptr-091598 Pan troglodytes 67.25 2.00e-163 568.00
IUUC-Pan-092412 Papio anubis 67.25 2.00e-163 568.00
IUUC-Psi-093300 Pelodiscus sinensis 66.75 4.00e-153 533.00
IUUC-Pma-094307 Petromyzon marinus 65.53 8.00e-166 575.00
IUUC-Pno-095153 Phaeosphaeria nodorum 45.59 2.00e-100 358.00
IUUC-Ppa-095800 Physcomitrella patens 76.67 0.00e+00 670.00
IUUC-Pfo-097240 Poecilia formosa 65.69 6.00e-163 566.00
IUUC-Pab-097697 Pongo abelii 68.00 4.00e-166 576.00
IUUC-Pop-099709 Populus trichocarpa 90.89 0.00e+00 786.00
IUUC-Pca-100642 Procavia capensis 60.10 2.00e-139 488.00
IUUC-Ppe-101212 Prunus persica 91.98 0.00e+00 799.00
IUUC-Pva-102253 Pteropus vampyrus 68.00 4.00e-166 576.00
IUUC-Pgr-103441 Puccinia graminis 50.13 8.00e-117 412.00
IUUC-Pte-104332 Pyrenophora teres 44.97 3.00e-101 361.00
IUUC-Pyt-104516 Pyrenophora triticirepentis 44.97 3.00e-101 361.00
IUUC-Rno-105678 Rattus norvegicus 68.00 4.00e-166 576.00
IUUC-Sce-106364 Saccharomyces cerevisiae 34.95 7.00e-66 243.00
IUUC-Sha-107575 Sarcophilus harrisii 68.25 6.00e-166 576.00
IUUC-Sja-108001 Schizosaccharomyces japonicus 48.01 3.00e-107 381.00
IUUC-Spo-108145 Schizosaccharomyces pombe 48.15 9.00e-108 382.00
IUUC-Smo-109159 Selaginella moellendorffii 76.46 0.00e+00 672.00
IUUC-Sit-110144 Setaria italica 86.89 0.00e+00 728.00
IUUC-Sly-111680 Solanum lycopersicum 92.09 0.00e+00 796.00
IUUC-Stu-111931 Solanum tuberosum 92.44 0.00e+00 787.00
IUUC-Sar-113236 Sorex araneus 61.00 3.00e-140 491.00
IUUC-Sbi-114637 Sorghum bicolor 86.41 0.00e+00 754.00
IUUC-Sre-114980 Sporisorium reilianum 52.48 7.00e-131 459.00
IUUC-Ssc-116352 Sus scrofa 67.00 3.00e-163 567.00
IUUC-Tgu-116925 Taeniopygia guttata 67.75 9.00e-166 575.00
IUUC-Tru-117549 Takifugu rubripes 67.16 2.00e-161 561.00
IUUC-Tsy-118854 Tarsius syrichta 67.25 2.00e-163 568.00
IUUC-Tni-120398 Tetraodon nigroviridis 67.41 1.00e-163 568.00
IUUC-Tca-121841 Theobroma cacao 91.55 0.00e+00 798.00
IUUC-Tre-122190 Trichoderma reesei 47.41 1.00e-103 369.00
IUUC-Tvi-122304 Trichoderma virens 47.16 4.00e-111 394.00
IUUC-Tae-124648 Triticum aestivum 86.17 0.00e+00 728.00
IUUC-Tur-126850 Triticum urartu 83.74 1.00e-164 571.00
IUUC-Tme-126949 Tuber melanosporum 50.86 2.00e-118 418.00
IUUC-Tbe-128010 Tupaia belangeri 60.25 6.00e-139 486.00
IUUC-Ttr-128558 Tursiops truncatus 61.25 1.00e-142 499.00
IUUC-Uma-129424 Ustilago maydis 52.48 3.00e-133 467.00
IUUC-Vda-129873 Verticillium dahliae 46.67 2.00e-110 392.00
IUUC-Vpa-130079 Vicugna pacos 67.50 3.00e-164 570.00
IUUC-Vvi-131585 Vitis vinifera 91.78 0.00e+00 800.00
IUUC-Xtr-132005 Xenopus tropicalis 67.75 7.00e-165 572.00
IUUC-Xma-133066 Xiphophorus maculatus 67.50 6.00e-164 569.00
IUUC-Yli-134334 Yarrowia lipolytica 36.36 1.00e-77 283.00
IUUC-Zma-135873 Zea mays 86.41 0.00e+00 729.00
Created Date 25-Jun-2017

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