iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ate-010537

Ensembl Protein ID

CADATEAP00009071

UniProt Accession

Q0CCP0; ERB1_ASPTN

Genbank Protein ID

EAU30676.1

Protein Name

Ribosome biogenesis protein erb1; Eukaryotic ribosome biogenesis protein 1

Genbank Nucleotide ID

CH476606

Gene Name

ATEG_08544; erb1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CADATEAG00009071	CADATEAT00009071	CADATEAP00009071

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-11	42.2	422	459

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+++v+ ++  ++   l++G+dDgt++vW+l tg++l
   Q: 422  GHKGRVRTVSVdPSgVWLATGGDDGTLRVWELLTGRQL 459
           8**********966699*****************9987 PP

Organism

Aspergillus terreus

Functional Description
(View)

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MVNASKVSKK RKAVTRDVEE EAGVFSGDEL NAENLDGALS DNANELSSDE DDSEVELVDE 60
FSDEDDEDEE ELDSDEIPSD GEEPKKKSAS TAVDGPQADD ESSSEDEQPN FRIEKDANGE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGAATG CTTCTAAGGT TTCGAAGAAG CGCAAGGCTG TCACTCGCGA TGTTGAGGAG 60
GAGGCTGGTG TGTTTTCCGG AGACGAACTC AACGCAGAAA ACCTCGACGG TGCTCTGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0070180--F:large ribosomal subunit rRNA binding
GO:0042273--P:ribosomal large subunit biogenesis
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	38.13	1.00e-106	379.00
IUUC-Aml-001507	Ailuropoda melanoleuca	41.77	1.00e-133	468.00
IUUC-Atr-003141	Amborella trichopoda	35.97	2.00e-72	264.00
IUUC-Apl-003545	Anas platyrhynchos	40.83	5.00e-119	419.00
IUUC-Aly-005649	Arabidopsis lyrata	40.80	5.00e-136	476.00
IUUC-Ath-007625	Arabidopsis thaliana	40.96	2.00e-130	458.00
IUUC-Ago-007958	Ashbya gossypii	55.25	0.00e+00	755.00
IUUC-Acl-008344	Aspergillus clavatus	84.26	0.00e+00	1254.00
IUUC-Afl-008616	Aspergillus flavus	87.56	0.00e+00	1336.00
IUUC-Afu-009083	Aspergillus fumigatus	84.78	0.00e+00	1254.00
IUUC-Ani-009365	Aspergillus nidulans	82.85	0.00e+00	1269.00
IUUC-Ang-009796	Aspergillus niger	87.45	0.00e+00	1280.00
IUUC-Aor-010015	Aspergillus oryzae	87.55	0.00e+00	1333.00
IUUC-Ame-011767	Astyanax mexicanus	47.41	1.00e-61	227.00
IUUC-Bgr-012286	Blumeria graminis	61.22	0.00e+00	944.00
IUUC-Bta-013569	Bos taurus	43.48	4.00e-146	509.00
IUUC-Bci-013820	Botrytis cinerea	63.61	0.00e+00	906.00
IUUC-Bdi-014477	Brachypodium distachyon	40.93	4.00e-131	460.00
IUUC-Bol-016099	Brassica oleracea	40.96	9.00e-135	472.00
IUUC-Bra-017174	Brassica rapa	41.05	9.00e-136	476.00
IUUC-Cel-018201	Caenorhabditis elegans	38.62	3.00e-116	410.00
IUUC-Cja-019009	Callithrix jacchus	44.80	3.00e-93	334.00
IUUC-Cfa-020173	Canis familiaris	39.51	5.00e-131	459.00
IUUC-Cpo-021796	Cavia porcellus	43.48	7.00e-146	509.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	40.85	1.00e-126	445.00
IUUC-Csa-023440	Chlorocebus sabaeus	43.63	6.00e-153	532.00
IUUC-Cin-025782	Ciona intestinalis	41.77	4.00e-153	533.00
IUUC-Csv-026352	Ciona savignyi	40.79	7.00e-147	512.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	59.18	0.00e+00	734.00
IUUC-Cne-027004	Cryptococcus neoformans	48.04	1.00e-180	624.00
IUUC-Cme-027242	Cyanidioschyzon merolae	36.46	4.00e-111	393.00
IUUC-Dre-028658	Danio rerio	44.74	4.00e-158	550.00
IUUC-Dno-028883	Dasypus novemcinctus	43.48	8.00e-147	512.00
IUUC-Dor-031031	Dipodomys ordii	43.34	8.00e-149	518.00
IUUC-Dse-031443	Dothistroma septosporum	60.20	0.00e+00	840.00
IUUC-Dme-031786	Drosophila melanogaster	42.81	7.00e-152	529.00
IUUC-Eca-033677	Equus caballus	43.32	2.00e-145	507.00
IUUC-Eeu-035310	Erinaceus europaeus	40.31	2.00e-109	387.00
IUUC-Fca-035888	Felis catus	42.24	4.00e-144	503.00
IUUC-Fal-037438	Ficedula albicollis	44.74	1.00e-119	421.00
IUUC-Fox-037973	Fusarium oxysporum	62.90	0.00e+00	881.00
IUUC-Fso-038187	Fusarium solani	64.22	0.00e+00	897.00
IUUC-Gmo-039114	Gadus morhua	41.30	8.00e-138	482.00
IUUC-Ggr-039746	Gaeumannomyces graminis	61.45	0.00e+00	898.00
IUUC-Gga-040631	Gallus gallus	42.19	2.00e-78	284.00
IUUC-Gac-042582	Gasterosteus aculeatus	42.48	9.00e-146	508.00
IUUC-Gma-044215	Glycine max	41.55	4.00e-138	483.00
IUUC-Ggo-045587	Gorilla gorilla	43.79	8.00e-153	531.00
IUUC-Hsa-046319	Homo sapiens	43.79	6.00e-153	532.00
IUUC-Hvu-047526	Hordeum vulgare	40.09	3.00e-124	437.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	43.81	2.00e-147	514.00
IUUC-Kpa-049221	Komagataella pastoris	50.72	0.00e+00	692.00
IUUC-Lch-049640	Latimeria chalumnae	43.49	1.00e-158	551.00
IUUC-Lpe-051135	Leersia perrieri	41.10	2.00e-70	258.00
IUUC-Loc-051930	Lepisosteus oculatus	44.72	5.00e-158	549.00
IUUC-Lma-053290	Leptosphaeria maculans	65.12	0.00e+00	907.00
IUUC-Laf-053903	Loxodonta africana	41.18	8.00e-127	446.00
IUUC-Mcc-055471	Macaca mulatta	43.32	2.00e-152	531.00
IUUC-Meu-056190	Macropus eugenii	43.34	6.00e-148	516.00
IUUC-Mor-057135	Magnaporthe oryzae	64.32	0.00e+00	875.00
IUUC-Mpo-057475	Magnaporthe poae	60.82	0.00e+00	855.00
IUUC-Mtr-058689	Medicago truncatula	39.45	9.00e-123	432.00
IUUC-Mla-059149	Melampsora laricipopulina	49.48	0.00e+00	626.00
IUUC-Mga-059645	Meleagris gallopavo	34.70	1.00e-40	157.00
IUUC-Mvi-060485	Microbotryum violaceum	44.77	2.00e-150	525.00
IUUC-Mmr-061674	Microcebus murinus	44.07	3.00e-146	510.00
IUUC-Mdo-062973	Monodelphis domestica	43.50	3.00e-154	537.00
IUUC-Mmu-064180	Mus musculus	44.10	6.00e-150	522.00
IUUC-Mac-064535	Musa acuminata	39.37	2.00e-87	315.00
IUUC-Mpu-066406	Mustela putorius furo	42.86	1.00e-147	515.00
IUUC-Mlu-067795	Myotis lucifugus	43.17	2.00e-137	481.00
IUUC-Nfi-068516	Neosartorya fischeri	84.81	0.00e+00	1214.00
IUUC-Ncr-068767	Neurospora crassa	64.33	0.00e+00	820.00
IUUC-Opr-071084	Ochotona princeps	50.21	3.00e-61	226.00
IUUC-Ont-071614	Oreochromis niloticus	42.77	4.00e-154	536.00
IUUC-Oba-075980	Oryza barthii	41.57	8.00e-70	256.00
IUUC-Obr-076799	Oryza brachyantha	40.52	3.00e-127	447.00
IUUC-Ogl-077134	Oryza glaberrima	40.52	1.00e-121	428.00
IUUC-Ogu-078655	Oryza glumaepatula	38.83	2.00e-117	414.00
IUUC-Oin-079654	Oryza indica	40.00	2.00e-121	427.00
IUUC-Olo-080706	Oryza longistaminata	41.98	1.00e-70	258.00
IUUC-Ome-081716	Oryza meridionalis	41.69	5.00e-70	257.00
IUUC-Oni-082508	Oryza nivara	38.62	2.00e-114	404.00
IUUC-Opu-083707	Oryza punctata	41.98	2.00e-70	258.00
IUUC-Oru-084453	Oryza rufipogon	41.98	1.00e-70	258.00
IUUC-Osa-085811	Oryza sativa	40.37	2.00e-121	427.00
IUUC-Ola-087361	Oryzias latipes	44.34	1.00e-153	534.00
IUUC-Oga-088015	Otolemur garnettii	43.94	3.00e-152	530.00
IUUC-Oar-090058	Ovis aries	51.72	5.00e-49	187.00
IUUC-Ptr-090631	Pan troglodytes	42.12	1.00e-63	235.00
IUUC-Pan-092306	Papio anubis	43.79	1.00e-153	535.00
IUUC-Pma-094622	Petromyzon marinus	42.86	2.00e-157	547.00
IUUC-Pno-094794	Phaeosphaeria nodorum	61.36	0.00e+00	848.00
IUUC-Ppa-095528	Physcomitrella patens	38.74	4.00e-86	310.00
IUUC-Pfo-096682	Poecilia formosa	43.27	3.00e-158	550.00
IUUC-Pab-097939	Pongo abelii	43.82	2.00e-137	480.00
IUUC-Pop-099530	Populus trichocarpa	42.61	3.00e-123	433.00
IUUC-Pca-100333	Procavia capensis	43.17	2.00e-147	514.00
IUUC-Ppe-102078	Prunus persica	41.01	7.00e-131	459.00
IUUC-Pgr-103525	Puccinia graminis	49.78	2.00e-168	584.00
IUUC-Ptt-103929	Puccinia triticina	49.62	6.00e-163	566.00
IUUC-Pte-104029	Pyrenophora teres	66.47	0.00e+00	955.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	64.88	0.00e+00	962.00
IUUC-Rno-105248	Rattus norvegicus	44.25	4.00e-150	523.00
IUUC-Sce-106381	Saccharomyces cerevisiae	53.75	0.00e+00	744.00
IUUC-Sha-106519	Sarcophilus harrisii	44.00	2.00e-154	536.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	46.31	5.00e-167	579.00
IUUC-Spo-108071	Schizosaccharomyces pombe	46.81	6.00e-163	565.00
IUUC-Smo-109604	Selaginella moellendorffii	39.70	9.00e-119	419.00
IUUC-Sit-109742	Setaria italica	40.28	1.00e-129	455.00
IUUC-Sly-110970	Solanum lycopersicum	43.23	1.00e-76	278.00
IUUC-Stu-112593	Solanum tuberosum	40.56	7.00e-134	469.00
IUUC-Sar-113123	Sorex araneus	49.33	1.00e-56	211.00
IUUC-Sbi-113945	Sorghum bicolor	40.37	1.00e-127	448.00
IUUC-Sre-115188	Sporisorium reilianum	45.78	1.00e-166	578.00
IUUC-Ssc-115352	Sus scrofa	43.01	3.00e-149	520.00
IUUC-Tru-117685	Takifugu rubripes	44.63	1.00e-160	558.00
IUUC-Tni-119982	Tetraodon nigroviridis	44.72	3.00e-154	536.00
IUUC-Tca-121664	Theobroma cacao	41.73	1.00e-137	481.00
IUUC-Tre-122229	Trichoderma reesei	62.39	0.00e+00	786.00
IUUC-Tvi-122576	Trichoderma virens	63.29	0.00e+00	798.00
IUUC-Tae-124110	Triticum aestivum	40.62	9.00e-119	419.00
IUUC-Tur-126781	Triticum urartu	37.80	3.00e-102	364.00
IUUC-Tme-127080	Tuber melanosporum	64.60	0.00e+00	889.00
IUUC-Ttr-128514	Tursiops truncatus	40.75	2.00e-92	332.00
IUUC-Uma-129556	Ustilago maydis	46.34	5.00e-164	570.00
IUUC-Vda-129715	Verticillium dahliae	63.94	0.00e+00	885.00
IUUC-Vvi-131211	Vitis vinifera	40.00	9.00e-127	445.00
IUUC-Xma-133883	Xiphophorus maculatus	42.81	8.00e-153	532.00
IUUC-Yli-134438	Yarrowia lipolytica	52.08	0.00e+00	686.00
IUUC-Zma-135341	Zea mays	37.04	8.00e-121	426.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence