iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cre-022789

Ensembl Protein ID

EDO98316

UniProt Accession

A8JCU1; A8JCU1_CHLRE

Genbank Protein ID

EDO98316.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS496158

Gene Name

CHLREDRAFT_139789

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_139789	EDO98316	EDO98316

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.50e-17	60.3	41	70

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvW 28
           gH+ds++c+a+ ++ ++++sG+ D+t+ +W
   Q: 41   GHKDSIYCVAYaQNgKRFASGGADKTVIIW 70
           8***********555*************** PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MLTTASYPIT IADGSQVVAG IGNRVLVYDA ADGDLLHALK GHKDSIYCVA YAQNGKRFAS 60
GGADKTVIIW TSKAEGILKY THNDAIQCLS YNPVTQQLAS ATGSDVGLWS PEQKSVAKHK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTGACCA CGGCTTCATA CCCTATTACA ATTGCAGATG GCTCGCAAGT TGTTGCGGGC 60
ATTGGGAACC GTGTGCTGGT CTACGATGCT GCGGATGGCG ACCTTCTGCA CGCGTTGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005929--C:cilium
GO:0030991--C:intraciliary transport particle A
GO:0060271--P:cilium assembly
GO:0035721--P:intraciliary retrograde transport
GO:0061512--P:protein localization to cilium

KEGG

cre:CHLREDRAFT_139789

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001933	Ailuropoda melanoleuca	48.46	0.00e+00	1164.00
IUUC-Apl-003504	Anas platyrhynchos	52.35	0.00e+00	1244.00
IUUC-Aca-004767	Anolis carolinensis	49.43	0.00e+00	1205.00
IUUC-Ame-011642	Astyanax mexicanus	41.94	0.00e+00	940.00
IUUC-Bta-012969	Bos taurus	49.85	0.00e+00	979.00
IUUC-Cel-018670	Caenorhabditis elegans	34.68	0.00e+00	746.00
IUUC-Cja-019249	Callithrix jacchus	45.63	0.00e+00	884.00
IUUC-Cfa-020915	Canis familiaris	49.25	0.00e+00	981.00
IUUC-Cpo-021888	Cavia porcellus	50.77	0.00e+00	1216.00
IUUC-Csa-023533	Chlorocebus sabaeus	48.45	0.00e+00	1149.00
IUUC-Cin-025121	Ciona intestinalis	46.03	0.00e+00	1066.00
IUUC-Csv-026240	Ciona savignyi	44.03	0.00e+00	1006.00
IUUC-Dno-029685	Dasypus novemcinctus	51.91	0.00e+00	1206.00
IUUC-Ete-032682	Echinops telfairi	44.86	0.00e+00	863.00
IUUC-Eca-033831	Equus caballus	49.15	0.00e+00	1186.00
IUUC-Eeu-034919	Erinaceus europaeus	39.15	5.00e-110	390.00
IUUC-Fca-036559	Felis catus	48.87	0.00e+00	1168.00
IUUC-Fal-037340	Ficedula albicollis	50.64	0.00e+00	1196.00
IUUC-Gga-040595	Gallus gallus	52.43	0.00e+00	1245.00
IUUC-Ggo-045356	Gorilla gorilla	46.71	0.00e+00	1125.00
IUUC-Hsa-046135	Homo sapiens	46.56	0.00e+00	1124.00
IUUC-Itr-048228	Ictidomys tridecemlineatus	49.54	0.00e+00	983.00
IUUC-Lch-050183	Latimeria chalumnae	43.71	3.00e-178	617.00
IUUC-Loc-052049	Lepisosteus oculatus	52.18	0.00e+00	1252.00
IUUC-Laf-053728	Loxodonta africana	48.94	0.00e+00	1180.00
IUUC-Mcc-054971	Macaca mulatta	47.01	0.00e+00	1131.00
IUUC-Meu-056446	Macropus eugenii	45.21	0.00e+00	1096.00
IUUC-Mga-059296	Meleagris gallopavo	45.00	0.00e+00	982.00
IUUC-Mmr-061232	Microcebus murinus	48.59	0.00e+00	948.00
IUUC-Mdo-062115	Monodelphis domestica	49.15	0.00e+00	1194.00
IUUC-Mmu-063664	Mus musculus	49.03	0.00e+00	1183.00
IUUC-Mpu-066136	Mustela putorius furo	46.48	0.00e+00	1107.00
IUUC-Mlu-068238	Myotis lucifugus	47.98	0.00e+00	1123.00
IUUC-Nle-069003	Nomascus leucogenys	46.47	0.00e+00	1052.00
IUUC-Ont-072080	Oreochromis niloticus	43.79	0.00e+00	1023.00
IUUC-Oan-072891	Ornithorhynchus anatinus	64.98	0.00e+00	687.00
IUUC-Ocu-074262	Oryctolagus cuniculus	48.26	0.00e+00	1133.00
IUUC-Ola-086538	Oryzias latipes	47.48	0.00e+00	945.00
IUUC-Oga-088722	Otolemur garnettii	49.70	0.00e+00	951.00
IUUC-Oar-089249	Ovis aries	51.49	0.00e+00	1192.00
IUUC-Ptr-090752	Pan troglodytes	45.70	0.00e+00	1086.00
IUUC-Pan-092472	Papio anubis	48.49	0.00e+00	1152.00
IUUC-Psi-093335	Pelodiscus sinensis	52.65	0.00e+00	1245.00
IUUC-Pma-094520	Petromyzon marinus	49.41	0.00e+00	1083.00
IUUC-Ppa-095600	Physcomitrella patens	78.82	1.00e-39	153.00
IUUC-Pfo-096526	Poecilia formosa	46.25	0.00e+00	1092.00
IUUC-Pab-098428	Pongo abelii	41.32	4.00e-138	484.00
IUUC-Pca-100233	Procavia capensis	55.24	4.00e-140	491.00
IUUC-Pva-103064	Pteropus vampyrus	42.97	0.00e+00	819.00
IUUC-Rno-105764	Rattus norvegicus	48.79	0.00e+00	1176.00
IUUC-Sha-106649	Sarcophilus harrisii	48.75	0.00e+00	1202.00
IUUC-Smo-109478	Selaginella moellendorffii	43.04	0.00e+00	959.00
IUUC-Sre-115051	Sporisorium reilianum	28.06	1.00e-11	63.20
IUUC-Tgu-116870	Taeniopygia guttata	47.98	0.00e+00	1134.00
IUUC-Tru-118661	Takifugu rubripes	46.98	0.00e+00	1134.00
IUUC-Tsy-119640	Tarsius syrichta	60.48	4.00e-55	208.00
IUUC-Tni-120812	Tetraodon nigroviridis	42.82	0.00e+00	966.00
IUUC-Ttr-128862	Tursiops truncatus	47.28	0.00e+00	1144.00
IUUC-Uma-129354	Ustilago maydis	30.15	1.00e-12	66.60
IUUC-Vpa-130049	Vicugna pacos	57.27	7.00e-78	283.00
IUUC-Xtr-131914	Xenopus tropicalis	50.93	0.00e+00	1203.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence