iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109247

Ensembl Protein ID

EFJ25547

UniProt Accession

D8RPV3; D8RPV3_SELML

Genbank Protein ID

EFJ25547.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377586

Gene Name

SELMODRAFT_413675

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_413675	EFJ25547	EFJ25547

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.00e-24	83.8	426	465
UBD/Beta-Prp	1.20e-53	183.0	285	467

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           gH+++v ++    +d+ +vs + D  ik+WD+r++++ ++
   Q: 426  GHQSPVVDVVVneDDNQIVSVATDSIIKIWDMRSNRCMQT 465
           8*******9789766**********************986 PP

UBD/Beta-Prp

   S: 99   slsfsp..sgdklvsGshdrtirvwdletgqclee...................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..t 176
           + ++ +  ++dkl+ G++  +++v+d + ++  e                    + ++h+ +v+ +++ + ++ l s+s D+t+ + dl  +k  r++  +
   Q: 285  CATWVRtpENDKLLYGDDRGYLHVYDFSDEWGGEIpriaagvteellpgmseklPWKIHNNWVTRIKYLSHSSSLLSCSMDSTLLMLDL--EKQKRKWsgK 383
           5555554589*********************998899**************************************************99..6677888635 PP
   S: 177  gghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlq 261
           + h++ +  l++ ++ +++v+++l + v++w+  t +++ +l+gh+++v +v + ++d+ +vs++ D  i+iWd+rs+ +++t+ 
   Q: 384  E-HHHGIFALDYCRSFNFIVTCGLERNVNIWNPFTAKIMGQLIGHQSPVVDVVVNEDDNQIVSVATDSIIKIWDMRSNRCMQTVV 467
           5.********************************************************************************975 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MADGDNNEFD VFKSSKWRGN RKSSFAQIFH ARERESGAHG GKLPPKPGGP SDRAPVSKSK 60
PQPEANFIKT CKNIKDVASE LSEKEMEHFF MKVDVNSKGV VDFDDFTSYI LQQQLAKEDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGATG GAGATAACAA CGAGTTCGAC GTTTTCAAGT CATCGAAGTG GCGTGGAAAT 60
CGAAAGTCGA GTTTCGCGGT TAGTCTATTT TTTTGGAACG CATTCCGGCT CTGAGCTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011992--EF-hand-dom_pair
IPR002048--EF_hand_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50222--EF_HAND_2
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005509--F:calcium ion binding

KEGG

smo:SELMODRAFT_413675

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001921	Ailuropoda melanoleuca	27.80	1.00e-47	183.00
IUUC-Aca-005140	Anolis carolinensis	24.77	8.00e-37	148.00
IUUC-Ame-011582	Astyanax mexicanus	28.83	3.00e-51	195.00
IUUC-Bta-013034	Bos taurus	26.92	5.00e-45	174.00
IUUC-Cja-020006	Callithrix jacchus	23.56	6.00e-40	158.00
IUUC-Cfa-020449	Canis familiaris	24.50	1.00e-39	158.00
IUUC-Cin-025187	Ciona intestinalis	25.95	1.00e-53	204.00
IUUC-Csv-026326	Ciona savignyi	27.51	1.00e-46	179.00
IUUC-Dre-027573	Danio rerio	26.21	3.00e-55	209.00
IUUC-Dno-030073	Dasypus novemcinctus	27.13	2.00e-46	180.00
IUUC-Dme-031984	Drosophila melanogaster	23.93	1.00e-19	92.00
IUUC-Eca-033354	Equus caballus	27.05	1.00e-43	169.00
IUUC-Fca-036185	Felis catus	26.06	2.00e-40	159.00
IUUC-Fal-037351	Ficedula albicollis	24.42	6.00e-27	115.00
IUUC-Gmo-039551	Gadus morhua	32.25	4.00e-34	138.00
IUUC-Gac-041482	Gasterosteus aculeatus	29.80	8.00e-50	190.00
IUUC-Itr-049019	Ictidomys tridecemlineatus	27.59	2.00e-47	182.00
IUUC-Lch-050242	Latimeria chalumnae	27.11	3.00e-52	199.00
IUUC-Loc-052710	Lepisosteus oculatus	28.93	3.00e-59	222.00
IUUC-Mcc-054635	Macaca mulatta	24.85	3.00e-42	167.00
IUUC-Mmr-061370	Microcebus murinus	23.57	4.00e-35	143.00
IUUC-Mdo-062347	Monodelphis domestica	25.23	3.00e-51	195.00
IUUC-Mmu-063878	Mus musculus	28.06	2.00e-52	199.00
IUUC-Mpu-066224	Mustela putorius furo	24.35	5.00e-34	139.00
IUUC-Mlu-068140	Myotis lucifugus	24.09	7.00e-29	121.00
IUUC-Ont-071688	Oreochromis niloticus	29.77	4.00e-49	188.00
IUUC-Oan-072752	Ornithorhynchus anatinus	28.57	5.00e-39	154.00
IUUC-Ocu-074664	Oryctolagus cuniculus	24.86	1.00e-33	137.00
IUUC-Ola-086449	Oryzias latipes	28.08	4.00e-46	178.00
IUUC-Oar-090438	Ovis aries	23.96	1.00e-39	157.00
IUUC-Pan-091772	Papio anubis	22.99	2.00e-23	104.00
IUUC-Pma-094599	Petromyzon marinus	29.94	2.00e-56	213.00
IUUC-Pfo-096408	Poecilia formosa	28.71	1.00e-50	193.00
IUUC-Pab-098444	Pongo abelii	24.83	4.00e-28	118.00
IUUC-Rno-105331	Rattus norvegicus	27.48	2.00e-41	163.00
IUUC-Sha-106832	Sarcophilus harrisii	27.80	1.00e-44	173.00
IUUC-Ssc-116310	Sus scrofa	29.69	5.00e-48	184.00
IUUC-Tru-117666	Takifugu rubripes	29.98	1.00e-48	186.00
IUUC-Tsy-119608	Tarsius syrichta	24.75	3.00e-24	106.00
IUUC-Tbe-127509	Tupaia belangeri	27.76	3.00e-26	113.00
IUUC-Vpa-130340	Vicugna pacos	23.56	7.00e-28	118.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence