iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sha-107220

Ensembl Protein ID

ENSSHAP00000005488.1

UniProt Accession

G3VQN3; G3VQN3_SARHA

Genbank Protein ID

ENSSHAP00000005488

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01015273

Gene Name

WDR20

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000004795.1	ENSSHAT00000005542.1	ENSSHAP00000005488.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-13	49.4	266	295

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrtgv 34
            c+++ +d +++v+G+ D  + vW++ +++
   Q: 266  LCVCWsPDgKYIVTGGEDDLVTVWSFVDCR 295
           6*****999****************88776 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MATEGGGKEM NEIKTQFTTR EGLYKLLPHS EYSRPNRVPF NSQGSNPVRV SFVNLNDQSG 60
NGDRLCFNVG RELYFYIYKG VRKAADLSKP IDKRIYKGTQ PTCHDFNHLT ATAESVSLLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGACGG AGGGAGGAGG GAAGGAGATG AACGAGATTA AGACCCAGTT CACCACCCGA 60
GAAGGTCTTT ACAAGCTGCT GCCGCATTCG GAGTACAGTC GGCCCAACCG GGTGCCCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000844	Aegilops tauschii	35.25	6.00e-34	137.00
IUUC-Aml-001749	Ailuropoda melanoleuca	93.21	0.00e+00	1068.00
IUUC-Atr-002459	Amborella trichopoda	38.24	9.00e-56	211.00
IUUC-Apl-003710	Anas platyrhynchos	98.36	0.00e+00	953.00
IUUC-Aca-004914	Anolis carolinensis	97.21	0.00e+00	1099.00
IUUC-Aly-005833	Arabidopsis lyrata	36.86	4.00e-56	212.00
IUUC-Ath-006649	Arabidopsis thaliana	36.15	2.00e-56	213.00
IUUC-Acl-008348	Aspergillus clavatus	33.88	1.00e-57	216.00
IUUC-Afl-008642	Aspergillus flavus	34.17	3.00e-58	219.00
IUUC-Ani-009266	Aspergillus nidulans	33.15	1.00e-53	204.00
IUUC-Ang-009614	Aspergillus niger	34.07	5.00e-57	215.00
IUUC-Aor-010159	Aspergillus oryzae	34.17	3.00e-58	219.00
IUUC-Ate-010476	Aspergillus terreus	35.51	2.00e-58	219.00
IUUC-Ame-010700	Astyanax mexicanus	88.51	0.00e+00	1065.00
IUUC-Bta-013293	Bos taurus	94.24	0.00e+00	1033.00
IUUC-Bdi-014307	Brachypodium distachyon	36.73	9.00e-53	201.00
IUUC-Bol-015990	Brassica oleracea	37.08	1.00e-56	213.00
IUUC-Bra-017842	Brassica rapa	23.95	4.00e-16	79.30
IUUC-Cel-018407	Caenorhabditis elegans	38.37	4.00e-123	435.00
IUUC-Cja-019007	Callithrix jacchus	91.93	0.00e+00	1120.00
IUUC-Cfa-020697	Canis familiaris	94.47	0.00e+00	707.00
IUUC-Cpo-022464	Cavia porcellus	88.21	0.00e+00	954.00
IUUC-Csa-023594	Chlorocebus sabaeus	97.20	0.00e+00	1155.00
IUUC-Cho-024294	Choloepus hoffmanni	97.64	3.00e-174	604.00
IUUC-Cin-025617	Ciona intestinalis	48.94	3.00e-88	318.00
IUUC-Csv-026120	Ciona savignyi	48.51	2.00e-53	201.00
IUUC-Cne-026940	Cryptococcus neoformans	27.70	2.00e-30	127.00
IUUC-Cme-027228	Cyanidioschyzon merolae	28.29	3.00e-21	97.40
IUUC-Dre-027892	Danio rerio	87.72	0.00e+00	1033.00
IUUC-Dno-029016	Dasypus novemcinctus	96.55	0.00e+00	1084.00
IUUC-Dor-030179	Dipodomys ordii	87.04	0.00e+00	991.00
IUUC-Dse-031362	Dothistroma septosporum	29.83	7.00e-47	181.00
IUUC-Dme-031790	Drosophila melanogaster	52.38	5.00e-110	392.00
IUUC-Eca-033704	Equus caballus	95.13	0.00e+00	893.00
IUUC-Eeu-034912	Erinaceus europaeus	91.39	0.00e+00	649.00
IUUC-Fca-036140	Felis catus	95.80	0.00e+00	1075.00
IUUC-Fal-037163	Ficedula albicollis	98.25	0.00e+00	1122.00
IUUC-Fox-037668	Fusarium oxysporum	32.00	1.00e-14	74.30
IUUC-Fso-038140	Fusarium solani	33.73	2.00e-54	207.00
IUUC-Gmo-039220	Gadus morhua	85.20	0.00e+00	1032.00
IUUC-Gga-040768	Gallus gallus	97.91	0.00e+00	1122.00
IUUC-Gac-042612	Gasterosteus aculeatus	87.59	0.00e+00	1059.00
IUUC-Gma-044186	Glycine max	37.84	4.00e-58	219.00
IUUC-Ggo-045322	Gorilla gorilla	91.89	0.00e+00	1137.00
IUUC-Hsa-046440	Homo sapiens	92.19	0.00e+00	1140.00
IUUC-Hvu-047057	Hordeum vulgare	31.58	4.00e-23	101.00
IUUC-Itr-048055	Ictidomys tridecemlineatus	96.81	0.00e+00	1135.00
IUUC-Lch-049678	Latimeria chalumnae	92.10	0.00e+00	1108.00
IUUC-Lpe-051378	Leersia perrieri	36.98	2.00e-52	200.00
IUUC-Loc-051970	Lepisosteus oculatus	89.55	0.00e+00	1070.00
IUUC-Laf-053660	Loxodonta africana	96.32	0.00e+00	1105.00
IUUC-Mcc-055671	Macaca mulatta	95.56	0.00e+00	982.00
IUUC-Meu-056346	Macropus eugenii	97.12	0.00e+00	652.00
IUUC-Mtr-058649	Medicago truncatula	38.71	3.00e-57	216.00
IUUC-Mga-059701	Meleagris gallopavo	97.96	0.00e+00	951.00
IUUC-Mmr-060982	Microcebus murinus	92.19	0.00e+00	1140.00
IUUC-Mdo-062998	Monodelphis domestica	99.47	0.00e+00	1096.00
IUUC-Mmu-064199	Mus musculus	96.34	0.00e+00	1148.00
IUUC-Mac-065546	Musa acuminata	36.29	1.00e-52	201.00
IUUC-Mpu-066310	Mustela putorius furo	94.59	0.00e+00	1052.00
IUUC-Mlu-068216	Myotis lucifugus	94.94	0.00e+00	1095.00
IUUC-Nle-069233	Nomascus leucogenys	96.85	0.00e+00	1152.00
IUUC-Opr-071024	Ochotona princeps	95.45	0.00e+00	1040.00
IUUC-Ont-072202	Oreochromis niloticus	87.04	0.00e+00	1054.00
IUUC-Oan-073075	Ornithorhynchus anatinus	98.16	0.00e+00	952.00
IUUC-Ocu-073978	Oryctolagus cuniculus	96.85	0.00e+00	1150.00
IUUC-Oba-075973	Oryza barthii	35.26	2.00e-52	199.00
IUUC-Obr-076346	Oryza brachyantha	36.98	2.00e-52	199.00
IUUC-Ogl-077048	Oryza glaberrima	36.69	5.00e-52	198.00
IUUC-Ogu-078225	Oryza glumaepatula	35.84	1.00e-48	187.00
IUUC-Oin-079597	Oryza indica	35.53	2.00e-55	210.00
IUUC-Olo-080349	Oryza longistaminata	42.31	3.00e-24	105.00
IUUC-Oni-082556	Oryza nivara	35.26	2.00e-52	199.00
IUUC-Opu-083344	Oryza punctata	35.67	3.00e-54	206.00
IUUC-Oru-085085	Oryza rufipogon	35.69	2.00e-55	210.00
IUUC-Osa-085527	Oryza sativa	35.69	5.00e-55	208.00
IUUC-Ola-086647	Oryzias latipes	86.66	0.00e+00	1046.00
IUUC-Oga-088879	Otolemur garnettii	94.70	0.00e+00	1142.00
IUUC-Oar-089333	Ovis aries	93.35	0.00e+00	1020.00
IUUC-Ptr-090538	Pan troglodytes	92.05	0.00e+00	1140.00
IUUC-Pan-092473	Papio anubis	95.92	0.00e+00	1180.00
IUUC-Psi-094013	Pelodiscus sinensis	96.56	0.00e+00	1121.00
IUUC-Ppa-095812	Physcomitrella patens	38.06	4.00e-57	215.00
IUUC-Pfo-096913	Poecilia formosa	84.92	0.00e+00	973.00
IUUC-Pab-098503	Pongo abelii	95.55	0.00e+00	1154.00
IUUC-Pop-099670	Populus trichocarpa	36.20	3.00e-54	206.00
IUUC-Pca-100287	Procavia capensis	94.74	0.00e+00	1100.00
IUUC-Ppe-101841	Prunus persica	36.49	2.00e-56	213.00
IUUC-Pva-102826	Pteropus vampyrus	95.45	0.00e+00	1093.00
IUUC-Rno-106076	Rattus norvegicus	94.73	0.00e+00	1166.00
IUUC-Smo-108846	Selaginella moellendorffii	38.66	1.00e-59	224.00
IUUC-Sit-109904	Setaria italica	36.00	3.00e-55	209.00
IUUC-Sly-111266	Solanum lycopersicum	37.94	1.00e-56	214.00
IUUC-Stu-112818	Solanum tuberosum	36.76	3.00e-56	212.00
IUUC-Sbi-113976	Sorghum bicolor	36.15	5.00e-52	198.00
IUUC-Ssc-116048	Sus scrofa	93.95	0.00e+00	1063.00
IUUC-Tgu-116514	Taeniopygia guttata	95.72	0.00e+00	954.00
IUUC-Tru-117529	Takifugu rubripes	86.88	0.00e+00	1051.00
IUUC-Tsy-119611	Tarsius syrichta	96.85	0.00e+00	1149.00
IUUC-Tni-120859	Tetraodon nigroviridis	89.39	0.00e+00	1017.00
IUUC-Tca-121339	Theobroma cacao	37.95	5.00e-57	215.00
IUUC-Tae-124346	Triticum aestivum	39.37	1.00e-52	201.00
IUUC-Tur-126428	Triticum urartu	31.80	5.00e-34	138.00
IUUC-Tme-126969	Tuber melanosporum	34.88	2.00e-56	213.00
IUUC-Tbe-127985	Tupaia belangeri	90.84	0.00e+00	967.00
IUUC-Ttr-128936	Tursiops truncatus	94.30	0.00e+00	1097.00
IUUC-Vvi-131155	Vitis vinifera	38.53	1.00e-56	214.00
IUUC-Xtr-131864	Xenopus tropicalis	94.49	0.00e+00	1092.00
IUUC-Xma-133459	Xiphophorus maculatus	84.94	0.00e+00	998.00
IUUC-Zma-135634	Zea mays	36.90	1.00e-54	207.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence