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Tag Content
UUCD2 ID IUUC-Tru-118180
UUCD1 version UUC-TaR-00253
Ensembl Protein ID ENSTRUP00000012899.1
UniProt Accession H2SKG6; H2SKG6_TAKRU
Protein Name Histone deacetylase
Gene Name hdac4 (1 of many); hdac4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSTRUG00000005375.1 ENSTRUT00000012960.1 ENSTRUP00000012899.1
ENSTRUG00000005375.1 ENSTRUT00000012961.1 ENSTRUP00000012900.1
ENSTRUG00000005375.1 ENSTRUT00000012962.1 ENSTRUP00000012901.1
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/Other 70.14 0.00e+00 1285.00 IUUC-Hsa-046925
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Takifugu rubripes
Functional Description
(View)

Functional Description



     Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
Protein Sequence
(Fasta)
LSHFPVDVSA AALPMQVPPA ATAILPMDLR VDHHHNHQQQ PTFDHQEQQL QQELVALKHK 60
QQLQRQLLIA EFQRQHEQLS RQHEIQLQEH IKHQQDLLAL KHQQELLEHQ RKIEQQRHEQ 120
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Protein Fasta Sequence



>IUUC-Tru-118180|E3,E3 activity/Other|Takifugu rubripes
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Nucleotide Sequence
(Fasta)
TTGTCTCATT TTCCAGTGGA CGTGAGCGCA GCAGCACTGC CCATGCAGGT GCCCCCCGCA 60
GCTACAGCCA TCCTCCCCAT GGACCTGCGT GTAGACCACC ACCACAACCA CCAGCAGCAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Tru-118180|E3,E3 activity/Other|Takifugu rubripes
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0156--Chromatin regulator
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033660--HDAC4
IPR000286--His_deacetylse
IPR023801--His_deacetylse_dom
IPR024643--Hist_deacetylase_Gln_rich_N
IPR017320--Histone_deAcase_II_euk
IPR011990--TPR-like_helical_dom

Pfam

PF12203--HDAC4_Gln
PF00850--Hist_deacetyl

PRINTS

PR01270--HDASUPER

Gene Ontology

GO:0000118--C:histone deacetylase complex
GO:0032041--F:NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0048701--P:embryonic cranial skeleton morphogenesis
GO:0001755--P:neural crest cell migration
GO:0090299--P:regulation of neural crest formation
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002279 Ailuropoda melanoleuca 72.75 0.00e+00 1249.00
IUUC-Apl-003250 Anas platyrhynchos 83.16 0.00e+00 850.00
IUUC-Aca-004668 Anolis carolinensis 79.96 0.00e+00 843.00
IUUC-Bta-013215 Bos taurus 72.89 0.00e+00 1241.00
IUUC-Cja-019816 Callithrix jacchus 69.90 0.00e+00 1266.00
IUUC-Cfa-020861 Canis familiaris 72.81 0.00e+00 1234.00
IUUC-Cpo-021562 Cavia porcellus 69.29 0.00e+00 1258.00
IUUC-Cre-022561 Chlamydomonas reinhardtii 50.67 6.00e-53 200.00
IUUC-Csa-023612 Chlorocebus sabaeus 69.95 0.00e+00 1244.00
IUUC-Csv-026359 Ciona savignyi 53.04 1.00e-88 319.00
IUUC-Dre-028284 Danio rerio 86.60 0.00e+00 862.00
IUUC-Dno-029951 Dasypus novemcinctus 75.63 0.00e+00 780.00
IUUC-Dor-030362 Dipodomys ordii 61.24 0.00e+00 999.00
IUUC-Dme-031766 Drosophila melanogaster 57.96 2.00e-153 536.00
IUUC-Fca-036187 Felis catus 73.77 0.00e+00 1285.00
IUUC-Gmo-038473 Gadus morhua 80.51 0.00e+00 771.00
IUUC-Gga-040501 Gallus gallus 83.16 0.00e+00 850.00
IUUC-Gac-042335 Gasterosteus aculeatus 84.69 0.00e+00 1506.00
IUUC-Ggo-045380 Gorilla gorilla 69.84 0.00e+00 1235.00
IUUC-Hsa-046925 Homo sapiens 70.21 0.00e+00 1258.00
IUUC-Itr-048036 Ictidomys tridecemlineatus 70.07 0.00e+00 1241.00
IUUC-Lch-050325 Latimeria chalumnae 77.82 0.00e+00 806.00
IUUC-Loc-052231 Lepisosteus oculatus 85.10 0.00e+00 838.00
IUUC-Laf-054490 Loxodonta africana 67.00 0.00e+00 1201.00
IUUC-Mcc-055265 Macaca mulatta 69.57 0.00e+00 1247.00
IUUC-Meu-056676 Macropus eugenii 77.27 3.00e-179 622.00
IUUC-Mmr-061633 Microcebus murinus 64.85 0.00e+00 1095.00
IUUC-Mmu-063089 Mus musculus 82.04 0.00e+00 832.00
IUUC-Mpu-065887 Mustela putorius furo 72.99 0.00e+00 1246.00
IUUC-Mlu-067470 Myotis lucifugus 71.04 0.00e+00 1268.00
IUUC-Nle-069099 Nomascus leucogenys 63.47 0.00e+00 717.00
IUUC-Ont-071613 Oreochromis niloticus 81.74 0.00e+00 1473.00
IUUC-Oan-073275 Ornithorhynchus anatinus 79.27 0.00e+00 846.00
IUUC-Ola-087031 Oryzias latipes 83.16 0.00e+00 1449.00
IUUC-Oga-088201 Otolemur garnettii 82.19 0.00e+00 814.00
IUUC-Oar-089997 Ovis aries 66.88 0.00e+00 1058.00
IUUC-Ptr-091116 Pan troglodytes 70.31 0.00e+00 1274.00
IUUC-Pan-092132 Papio anubis 70.64 0.00e+00 865.00
IUUC-Psi-093734 Pelodiscus sinensis 82.39 0.00e+00 815.00
IUUC-Pma-094347 Petromyzon marinus 68.75 0.00e+00 673.00
IUUC-Pfo-096293 Poecilia formosa 81.06 0.00e+00 1434.00
IUUC-Pab-098491 Pongo abelii 67.53 0.00e+00 1169.00
IUUC-Pca-101004 Procavia capensis 67.71 6.00e-94 339.00
IUUC-Pva-102961 Pteropus vampyrus 54.86 2.00e-174 606.00
IUUC-Rno-105005 Rattus norvegicus 81.63 0.00e+00 825.00
IUUC-Sha-107646 Sarcophilus harrisii 72.29 1.00e-166 580.00
IUUC-Ssc-115428 Sus scrofa 71.00 0.00e+00 1237.00
IUUC-Tgu-116776 Taeniopygia guttata 83.61 0.00e+00 848.00
IUUC-Tsy-119468 Tarsius syrichta 60.31 5.00e-144 505.00
IUUC-Tni-120196 Tetraodon nigroviridis 90.27 0.00e+00 1582.00
IUUC-Ttr-128360 Tursiops truncatus 65.68 0.00e+00 761.00
IUUC-Xtr-132956 Xenopus tropicalis 76.12 0.00e+00 806.00
Created Date 25-Jun-2017

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