iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           gHt  vt++++  s  +ll+s++ Dg ++vW++
   Q: 158  GHTKAVTAIDWstSHvHLLASAGLDGAVYVWNV 190
           8**********9766899*************96 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MDLICNSYAN DSDDEPEPVT NERLTSKIAA APSIPSKRPY PVPEERQYKP PRRPYPPHGS 60
YSESQTSSSF SIPVPVPVPV PGRYVSKRER SLLASLSTIP TPDQSSDLSQ KPYSSPTVLG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGATTAAT AGTATAATGA ATTAGAGATT GTTAGTGAGA ATGATCCCGA AACAACAATT 60
CCAATTGATA AATGCATACA CGTGGGCCTG GAGCATTCTT CTGGCCCAAT TAAAGCCCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex

KEGG

ath:AT5G54520

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000454	Aegilops tauschii	41.38	6.00e-53	201.00
IUUC-Aml-001588	Ailuropoda melanoleuca	35.67	8.00e-64	237.00
IUUC-Atr-003155	Amborella trichopoda	62.01	4.00e-133	467.00
IUUC-Apl-003544	Anas platyrhynchos	40.76	1.00e-56	211.00
IUUC-Aly-006510	Arabidopsis lyrata	92.12	0.00e+00	796.00
IUUC-Ame-010607	Astyanax mexicanus	40.87	6.00e-47	179.00
IUUC-Bgr-012230	Blumeria graminis	27.03	4.00e-36	145.00
IUUC-Bta-013542	Bos taurus	35.03	2.00e-63	236.00
IUUC-Bdi-014736	Brachypodium distachyon	56.05	2.00e-125	442.00
IUUC-Bol-016112	Brassica oleracea	81.00	0.00e+00	720.00
IUUC-Bra-016685	Brassica rapa	80.13	0.00e+00	706.00
IUUC-Cja-018883	Callithrix jacchus	36.62	5.00e-65	241.00
IUUC-Cfa-021278	Canis familiaris	35.35	2.00e-63	235.00
IUUC-Cpo-022449	Cavia porcellus	34.45	2.00e-61	228.00
IUUC-Csa-023916	Chlorocebus sabaeus	36.31	2.00e-64	239.00
IUUC-Csv-026371	Ciona savignyi	29.37	1.00e-33	136.00
IUUC-Eca-033484	Equus caballus	35.99	6.00e-64	238.00
IUUC-Fca-035673	Felis catus	35.67	3.00e-64	238.00
IUUC-Fal-036795	Ficedula albicollis	36.62	3.00e-70	257.00
IUUC-Gmo-039062	Gadus morhua	38.01	4.00e-56	210.00
IUUC-Gga-040773	Gallus gallus	39.23	1.00e-63	236.00
IUUC-Gac-042364	Gasterosteus aculeatus	38.93	2.00e-61	228.00
IUUC-Gma-043100	Glycine max	54.49	1.00e-140	492.00
IUUC-Ggo-045220	Gorilla gorilla	36.31	1.00e-64	239.00
IUUC-Hsa-046511	Homo sapiens	36.31	2.00e-64	239.00
IUUC-Hvu-047431	Hordeum vulgare	58.94	6.00e-121	426.00
IUUC-Lch-049590	Latimeria chalumnae	39.56	6.00e-67	246.00
IUUC-Lpe-050810	Leersia perrieri	61.40	8.00e-92	330.00
IUUC-Loc-052196	Lepisosteus oculatus	36.70	2.00e-73	269.00
IUUC-Mcc-055622	Macaca mulatta	35.99	5.00e-64	238.00
IUUC-Mtr-058041	Medicago truncatula	66.17	1.00e-135	475.00
IUUC-Mga-060149	Meleagris gallopavo	40.19	4.00e-56	210.00
IUUC-Mmr-061552	Microcebus murinus	36.62	9.00e-64	237.00
IUUC-Mdo-061969	Monodelphis domestica	36.31	5.00e-68	251.00
IUUC-Mmu-063343	Mus musculus	36.31	2.00e-63	236.00
IUUC-Mac-065079	Musa acuminata	57.33	2.00e-124	438.00
IUUC-Mpu-065949	Mustela putorius furo	34.65	7.00e-45	174.00
IUUC-Mlu-067523	Myotis lucifugus	35.80	2.00e-44	172.00
IUUC-Ont-072361	Oreochromis niloticus	40.06	2.00e-70	259.00
IUUC-Oba-075367	Oryza barthii	58.17	9.00e-119	419.00
IUUC-Obr-076738	Oryza brachyantha	56.38	1.00e-117	416.00
IUUC-Ogu-078590	Oryza glumaepatula	57.89	3.00e-118	417.00
IUUC-Oin-079678	Oryza indica	57.98	4.00e-125	440.00
IUUC-Olo-080453	Oryza longistaminata	61.37	2.00e-106	378.00
IUUC-Ome-081794	Oryza meridionalis	57.47	7.00e-101	359.00
IUUC-Oni-082432	Oryza nivara	57.98	3.00e-125	441.00
IUUC-Opu-083897	Oryza punctata	58.78	1.00e-123	436.00
IUUC-Oru-085068	Oryza rufipogon	56.18	4.00e-115	407.00
IUUC-Osa-085805	Oryza sativa	57.45	1.00e-124	439.00
IUUC-Ola-087567	Oryzias latipes	41.00	3.00e-63	234.00
IUUC-Oga-088168	Otolemur garnettii	37.58	4.00e-65	241.00
IUUC-Oar-090158	Ovis aries	34.39	4.00e-56	211.00
IUUC-Ptr-090913	Pan troglodytes	30.25	3.00e-46	178.00
IUUC-Pan-092157	Papio anubis	36.31	2.00e-64	239.00
IUUC-Psi-093817	Pelodiscus sinensis	39.11	8.00e-64	236.00
IUUC-Pma-094263	Petromyzon marinus	41.01	9.00e-42	162.00
IUUC-Ppa-095302	Physcomitrella patens	47.48	2.00e-105	374.00
IUUC-Pfo-097526	Poecilia formosa	37.11	5.00e-71	261.00
IUUC-Pab-098152	Pongo abelii	34.86	1.00e-52	200.00
IUUC-Pop-099987	Populus trichocarpa	60.90	4.00e-137	480.00
IUUC-Ppe-101575	Prunus persica	54.49	1.00e-137	481.00
IUUC-Pva-102942	Pteropus vampyrus	36.62	1.00e-63	236.00
IUUC-Rno-104857	Rattus norvegicus	36.62	2.00e-63	236.00
IUUC-Sha-106763	Sarcophilus harrisii	36.31	3.00e-69	255.00
IUUC-Sit-110488	Setaria italica	57.45	2.00e-121	428.00
IUUC-Sly-110893	Solanum lycopersicum	62.03	4.00e-130	457.00
IUUC-Stu-112566	Solanum tuberosum	55.38	7.00e-131	459.00
IUUC-Sar-113617	Sorex araneus	38.57	1.00e-27	117.00
IUUC-Sbi-114566	Sorghum bicolor	54.71	6.00e-122	430.00
IUUC-Tgu-117015	Taeniopygia guttata	37.26	1.00e-70	259.00
IUUC-Tca-121587	Theobroma cacao	64.19	4.00e-145	507.00
IUUC-Tae-123717	Triticum aestivum	57.87	5.00e-126	443.00
IUUC-Tur-126075	Triticum urartu	63.89	2.00e-52	198.00
IUUC-Tbe-127502	Tupaia belangeri	30.57	2.00e-41	162.00
IUUC-Ttr-129033	Tursiops truncatus	36.62	4.00e-65	241.00
IUUC-Vvi-131505	Vitis vinifera	65.43	2.00e-150	524.00
IUUC-Xtr-132851	Xenopus tropicalis	40.67	2.00e-55	207.00
IUUC-Xma-133463	Xiphophorus maculatus	37.87	4.00e-70	258.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence