iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pan-092261

Ensembl Protein ID

ENSPANP00000018965.1

UniProt Accession

A0A096P0U0; A0A096P0U0_PAPAN

Genbank Protein ID

ENSPANP00000018965

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AHZZ01004818

Gene Name

PRPF4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPANG00000025776.1	ENSPANT00000027620.1	ENSPANP00000018965.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-38	129.6	406	444
UBD/Beta-Prp	1.40e-92	310.1	231	478

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH  ++++++f ++  ++++Gs+D+t+kvWDlr+ +++ 
   Q: 406  GHLKEIYGIHFsPNgYHIATGSGDNTCKVWDLRQRRCVY 444
           7999********77799*****************99985 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk........ilvtgseDrtikvwdlstgkcvht 89
           ++ +i+  +fsp++++lat++++g  k+w+v + +ll++l gh+  v a+ f+p++          l++++ D+ +k+w+l++ ++v  
   Q: 231  DDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTvsldqkdvNLASCAADGSVKLWSLDSDEPVAD 319
           67899999********************************************99988888888999*********************** PP
   S: 90   lkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgg 178
           ++gh+ +v  + ++psg +l ++  dr  r+wdle ++++   ++gh+  v  +++h+dg+l  +G+lD + r+Wdl+tg+++  l+g 
   Q: 320  IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEIL-HQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG- 406
           *****************************************.********************************************99. PP
   S: 179  htdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs.pnderlvsgssDgsiriW 249
           h + +y + f++ng ++++gs d+t k+wdl++ +cv+t  +h++ v+ v+f   ++++l++g+ D++ +iW
   Q: 407  HLKEIYGIHFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEpIHGNFLLTGAYDNTAKIW 478
           *****************************************************88***************** PP

Organism

Papio anubis

Protein Sequence
(Fasta)

MASSRTSSTQ ATKTKTPDDL VAPVVKKPHI YYGSLEEKER ERLAKGESGI LGKEGLKAGI 60
EAGNINITSG EVFEIEEHIS ERQAEVLAEF ERRKRARQIN VSTDDSEVKA CLRALGEPIT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTCCT CGCGAACCTC CTCCACGGTA CAGAGCCCGG GATCTCAACT CACTCTGGCA 60
GGGAGCGCGA AGGGGGAAGA GGATCTCTGC GGGAAGGGGC CGTTAGGGAG CGAGAGAAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0015030--C:Cajal body
GO:0016607--C:nuclear speck
GO:0071001--C:U4/U6 snRNP

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000771	Aegilops tauschii	44.52	5.00e-99	354.00
IUUC-Aml-001737	Ailuropoda melanoleuca	99.61	0.00e+00	1010.00
IUUC-Atr-002828	Amborella trichopoda	43.23	9.00e-102	363.00
IUUC-Apl-003723	Anas platyrhynchos	89.42	0.00e+00	946.00
IUUC-Aca-004972	Anolis carolinensis	89.14	0.00e+00	888.00
IUUC-Aly-006531	Arabidopsis lyrata	42.04	2.00e-93	336.00
IUUC-Ath-007367	Arabidopsis thaliana	43.71	9.00e-107	380.00
IUUC-Ago-007893	Ashbya gossypii	32.82	2.00e-53	203.00
IUUC-Acl-008236	Aspergillus clavatus	38.37	6.00e-90	324.00
IUUC-Afl-008522	Aspergillus flavus	39.38	1.00e-98	353.00
IUUC-Afu-008904	Aspergillus fumigatus	38.84	5.00e-95	341.00
IUUC-Ani-009198	Aspergillus nidulans	38.75	3.00e-98	352.00
IUUC-Ang-009662	Aspergillus niger	41.85	2.00e-99	355.00
IUUC-Aor-009881	Aspergillus oryzae	39.38	1.00e-98	353.00
IUUC-Ate-010333	Aspergillus terreus	37.19	7.00e-88	317.00
IUUC-Ame-011697	Astyanax mexicanus	80.04	0.00e+00	810.00
IUUC-Bgr-012254	Blumeria graminis	38.68	1.00e-95	343.00
IUUC-Bta-012615	Bos taurus	98.28	0.00e+00	988.00
IUUC-Bci-013720	Botrytis cinerea	38.54	1.00e-96	346.00
IUUC-Bdi-014302	Brachypodium distachyon	45.33	3.00e-107	382.00
IUUC-Bol-015594	Brassica oleracea	43.10	2.00e-98	353.00
IUUC-Bra-017465	Brassica rapa	42.89	1.00e-98	353.00
IUUC-Cel-018632	Caenorhabditis elegans	43.79	6.00e-107	380.00
IUUC-Cja-019747	Callithrix jacchus	99.24	0.00e+00	1039.00
IUUC-Cfa-020288	Canis familiaris	99.61	0.00e+00	1013.00
IUUC-Cpo-021440	Cavia porcellus	97.64	0.00e+00	994.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	47.75	5.00e-86	310.00
IUUC-Csa-023139	Chlorocebus sabaeus	99.70	0.00e+00	706.00
IUUC-Cho-024481	Choloepus hoffmanni	95.36	0.00e+00	859.00
IUUC-Cin-025106	Ciona intestinalis	59.19	2.00e-175	608.00
IUUC-Csv-026087	Ciona savignyi	57.43	1.00e-173	602.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	37.63	1.00e-90	327.00
IUUC-Cne-026793	Cryptococcus neoformans	41.20	5.00e-104	371.00
IUUC-Dre-028723	Danio rerio	79.45	0.00e+00	786.00
IUUC-Dno-029299	Dasypus novemcinctus	99.01	0.00e+00	1008.00
IUUC-Dor-030345	Dipodomys ordii	100.00	4.00e-69	255.00
IUUC-Dse-031562	Dothistroma septosporum	36.62	1.00e-89	323.00
IUUC-Dme-031783	Drosophila melanogaster	55.58	2.00e-140	492.00
IUUC-Ete-032669	Echinops telfairi	97.33	0.00e+00	1018.00
IUUC-Eca-033566	Equus caballus	99.60	0.00e+00	1007.00
IUUC-Eeu-034524	Erinaceus europaeus	99.16	1.00e-146	513.00
IUUC-Fca-036215	Felis catus	99.61	0.00e+00	1012.00
IUUC-Fal-037018	Ficedula albicollis	90.00	0.00e+00	790.00
IUUC-Fox-037936	Fusarium oxysporum	36.44	5.00e-85	308.00
IUUC-Fso-038366	Fusarium solani	38.14	2.00e-89	322.00
IUUC-Gmo-038966	Gadus morhua	66.95	2.00e-140	491.00
IUUC-Ggr-039942	Gaeumannomyces graminis	35.55	4.00e-84	305.00
IUUC-Gga-040797	Gallus gallus	91.04	0.00e+00	932.00
IUUC-Gac-042598	Gasterosteus aculeatus	68.25	0.00e+00	659.00
IUUC-Gma-044220	Glycine max	43.95	3.00e-103	369.00
IUUC-Ggo-044682	Gorilla gorilla	99.01	0.00e+00	999.00
IUUC-Hsa-045804	Homo sapiens	98.85	0.00e+00	1035.00
IUUC-Hvu-047567	Hordeum vulgare	43.26	9.00e-95	340.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	98.47	0.00e+00	1027.00
IUUC-Kpa-049369	Komagataella pastoris	33.24	2.00e-61	229.00
IUUC-Lch-050074	Latimeria chalumnae	80.90	0.00e+00	818.00
IUUC-Lpe-051333	Leersia perrieri	44.16	7.00e-98	350.00
IUUC-Loc-052164	Lepisosteus oculatus	81.42	0.00e+00	835.00
IUUC-Lma-053088	Leptosphaeria maculans	36.36	1.00e-85	310.00
IUUC-Laf-053460	Loxodonta africana	97.90	0.00e+00	1025.00
IUUC-Mcc-055859	Macaca mulatta	99.61	0.00e+00	1012.00
IUUC-Meu-056134	Macropus eugenii	95.31	0.00e+00	988.00
IUUC-Mor-057251	Magnaporthe oryzae	37.15	5.00e-84	305.00
IUUC-Mpo-057375	Magnaporthe poae	40.40	1.00e-53	202.00
IUUC-Mtr-057656	Medicago truncatula	42.89	3.00e-93	335.00
IUUC-Mla-059145	Melampsora laricipopulina	40.44	5.00e-100	357.00
IUUC-Mga-059855	Meleagris gallopavo	87.69	0.00e+00	928.00
IUUC-Mvi-060372	Microbotryum violaceum	41.98	2.00e-93	336.00
IUUC-Mmr-060826	Microcebus murinus	98.82	0.00e+00	1007.00
IUUC-Mdo-062748	Monodelphis domestica	95.65	0.00e+00	979.00
IUUC-Mmu-063351	Mus musculus	99.21	0.00e+00	1008.00
IUUC-Mac-064846	Musa acuminata	44.60	4.00e-94	338.00
IUUC-Mpu-066006	Mustela putorius furo	99.61	0.00e+00	1012.00
IUUC-Mlu-067398	Myotis lucifugus	99.21	0.00e+00	1007.00
IUUC-Nfi-068399	Neosartorya fischeri	38.65	1.00e-100	360.00
IUUC-Ncr-068711	Neurospora crassa	37.63	9.00e-91	327.00
IUUC-Nle-069982	Nomascus leucogenys	99.24	0.00e+00	1039.00
IUUC-Opr-070596	Ochotona princeps	98.47	0.00e+00	1033.00
IUUC-Ont-072374	Oreochromis niloticus	74.24	0.00e+00	758.00
IUUC-Oan-073166	Ornithorhynchus anatinus	94.12	0.00e+00	749.00
IUUC-Ocu-074371	Oryctolagus cuniculus	99.41	0.00e+00	1010.00
IUUC-Oba-075083	Oryza barthii	43.96	5.00e-101	361.00
IUUC-Obr-076405	Oryza brachyantha	43.93	2.00e-97	348.00
IUUC-Ogl-077683	Oryza glaberrima	43.76	8.00e-101	360.00
IUUC-Ogu-078486	Oryza glumaepatula	43.99	1.00e-100	360.00
IUUC-Oin-079679	Oryza indica	43.96	1.00e-103	370.00
IUUC-Olo-080243	Oryza longistaminata	46.22	2.00e-90	325.00
IUUC-Ome-081230	Oryza meridionalis	43.76	2.00e-103	369.00
IUUC-Oni-082961	Oryza nivara	43.76	1.00e-103	370.00
IUUC-Opu-083189	Oryza punctata	42.89	3.00e-100	358.00
IUUC-Oru-084353	Oryza rufipogon	44.06	2.00e-101	362.00
IUUC-Osa-085458	Oryza sativa	43.76	2.00e-103	369.00
IUUC-Ola-086940	Oryzias latipes	74.35	0.00e+00	753.00
IUUC-Olu-087580	Ostreococcus lucimarinus	35.04	1.00e-63	237.00
IUUC-Oga-088703	Otolemur garnettii	93.69	0.00e+00	972.00
IUUC-Oar-089829	Ovis aries	98.85	0.00e+00	992.00
IUUC-Ptr-090838	Pan troglodytes	98.85	0.00e+00	1035.00
IUUC-Psi-093020	Pelodiscus sinensis	90.68	0.00e+00	949.00
IUUC-Pno-094858	Phaeosphaeria nodorum	36.85	3.00e-81	295.00
IUUC-Ppa-095531	Physcomitrella patens	45.04	5.00e-116	411.00
IUUC-Pfo-096812	Poecilia formosa	69.49	0.00e+00	667.00
IUUC-Pab-097805	Pongo abelii	89.08	0.00e+00	889.00
IUUC-Pop-100051	Populus trichocarpa	45.02	3.00e-105	375.00
IUUC-Pca-100152	Procavia capensis	98.83	0.00e+00	1018.00
IUUC-Ppe-101244	Prunus persica	45.54	1.00e-105	376.00
IUUC-Pva-102529	Pteropus vampyrus	95.22	0.00e+00	986.00
IUUC-Pgr-103550	Puccinia graminis	36.81	5.00e-101	361.00
IUUC-Ptt-103951	Puccinia triticina	33.47	2.00e-79	289.00
IUUC-Pte-104151	Pyrenophora teres	36.72	4.00e-81	295.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	37.37	6.00e-83	301.00
IUUC-Rno-105747	Rattus norvegicus	99.21	0.00e+00	1007.00
IUUC-Sce-106418	Saccharomyces cerevisiae	33.55	2.00e-66	246.00
IUUC-Sha-107334	Sarcophilus harrisii	96.05	0.00e+00	981.00
IUUC-Sja-107794	Schizosaccharomyces japonicus	35.18	1.00e-69	257.00
IUUC-Spo-108189	Schizosaccharomyces pombe	38.03	3.00e-80	291.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	37.69	2.00e-94	339.00
IUUC-Smo-108924	Selaginella moellendorffii	46.46	3.00e-109	388.00
IUUC-Sit-110102	Setaria italica	44.24	8.00e-102	363.00
IUUC-Sly-111668	Solanum lycopersicum	46.28	1.00e-107	383.00
IUUC-Stu-111928	Solanum tuberosum	45.82	4.00e-107	381.00
IUUC-Sar-113266	Sorex araneus	86.19	0.00e+00	822.00
IUUC-Sbi-114134	Sorghum bicolor	44.02	3.00e-102	365.00
IUUC-Sre-115114	Sporisorium reilianum	41.34	9.00e-103	367.00
IUUC-Ssc-115443	Sus scrofa	99.61	0.00e+00	1011.00
IUUC-Tgu-117157	Taeniopygia guttata	90.08	0.00e+00	882.00
IUUC-Tru-118587	Takifugu rubripes	74.26	0.00e+00	732.00
IUUC-Tsy-119157	Tarsius syrichta	100.00	0.00e+00	788.00
IUUC-Tni-120427	Tetraodon nigroviridis	74.51	0.00e+00	736.00
IUUC-Tca-121368	Theobroma cacao	43.53	1.00e-106	380.00
IUUC-Tre-122074	Trichoderma reesei	37.37	5.00e-86	311.00
IUUC-Tvi-122349	Trichoderma virens	36.58	8.00e-85	307.00
IUUC-Tae-125651	Triticum aestivum	44.22	2.00e-101	362.00
IUUC-Tur-126532	Triticum urartu	43.75	3.00e-87	315.00
IUUC-Tme-126951	Tuber melanosporum	40.76	4.00e-100	358.00
IUUC-Tbe-128136	Tupaia belangeri	90.63	0.00e+00	928.00
IUUC-Ttr-129169	Tursiops truncatus	99.00	9.00e-166	576.00
IUUC-Uma-129399	Ustilago maydis	41.74	1.00e-102	366.00
IUUC-Vda-129842	Verticillium dahliae	37.69	8.00e-92	330.00
IUUC-Vpa-130440	Vicugna pacos	98.66	0.00e+00	1034.00
IUUC-Vvi-131075	Vitis vinifera	46.26	5.00e-107	382.00
IUUC-Xtr-132713	Xenopus tropicalis	48.72	3.00e-109	388.00
IUUC-Xma-133002	Xiphophorus maculatus	79.94	9.00e-173	599.00
IUUC-Yli-134569	Yarrowia lipolytica	35.96	6.00e-75	274.00
IUUC-Zma-135799	Zea mays	42.31	3.00e-99	355.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence