iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099517

UUCD1 version

UUC-PoT-01548

Ensembl Protein ID

POPTR_0013s06060.1

UniProt Accession

A9PBR0; A9PBR0_POPTR

Genbank Protein ID

ABK93813.1; ABK95345.1; ABK95717.1; EEE95640.1; ERP53714.1

Protein Name

Ubiquitin-conjugating enzyme E2-17 kDa family protein

Genbank Nucleotide ID

EF145674; EF147327; EF147711; CM000349; CM000349

Gene Name

POPTR_0013s06060g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0013s06060	POPTR_0013s06060.1	POPTR_0013s06060.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.80e-53	181.1	8	143

Active Site

Position(s)	Description	Evidence
88	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeek 91
           Rl++++k+l++dpp+gis  p+d+ +++ w+++i+Gp+dtp++gg+Fkl+++f+edYP kPP+v+f++++fhPn+y++G++Cl+il+  ++
   Q: 8    RLMRDFKRLQQDPPAGISGAPQDN-NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQ 95
           9**********************9.9************************************************************9..** PP
   S: 92   Wspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvre 139
           Wsp ++v+ +l+siqsll++pnp+sp+n+eaa+++++n++ey+++vre
   Q: 96   WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 143
           *********************************************985 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSTPARKRLM RDFKRLQQDP PAGISGAPQD NNIMLWNAVI FGPDDTPWDG GTFKLTLQFT 60
EDYPNKPPTV RFVSRMFHPN IYADGSICLD ILQNQWSPIY DVAAILTSIQ SLLCDPNPNS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGACCTTGT TTCGCGAAGC ACGCAAGTAA AGAACTCAAA ACGCCAGCCC CACAAAAAAG 60
AAAAGAAAAG GCAAGCCCTC CTCCTCCTCC TCCTCCTCGC TCTCATGGAT CTTTGATAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0006281--P:DNA repair
GO:0016574--P:histone ubiquitination
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination

KEGG

pop:POPTR_0013s06060g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001001	Aegilops tauschii	95.39	8.00e-86	308.00
IUUC-Aml-002120	Ailuropoda melanoleuca	76.51	5.00e-70	255.00
IUUC-Atr-002862	Amborella trichopoda	99.34	5.00e-88	315.00
IUUC-Apl-004063	Anas platyrhynchos	70.55	3.00e-59	219.00
IUUC-Aca-005001	Anolis carolinensis	76.51	6.00e-70	255.00
IUUC-Ago-007745	Ashbya gossypii	65.10	7.00e-60	222.00
IUUC-Ame-010844	Astyanax mexicanus	79.19	3.00e-72	263.00
IUUC-Bgr-012039	Blumeria graminis	65.67	1.00e-54	204.00
IUUC-Bta-012840	Bos taurus	76.51	5.00e-70	255.00
IUUC-Bci-013919	Botrytis cinerea	67.79	2.00e-62	230.00
IUUC-Bdi-014308	Brachypodium distachyon	98.03	2.00e-87	313.00
IUUC-Cel-018244	Caenorhabditis elegans	73.83	3.00e-69	253.00
IUUC-Cja-018783	Callithrix jacchus	79.19	4.00e-72	262.00
IUUC-Cfa-020646	Canis familiaris	79.19	7.00e-72	262.00
IUUC-Cpo-021323	Cavia porcellus	78.52	7.00e-72	261.00
IUUC-Csa-023588	Chlorocebus sabaeus	79.19	4.00e-72	262.00
IUUC-Cho-024773	Choloepus hoffmanni	61.07	3.00e-49	186.00
IUUC-Cin-025537	Ciona intestinalis	70.00	2.00e-55	207.00
IUUC-Csv-025846	Ciona savignyi	69.08	5.00e-59	219.00
IUUC-Cgl-026381	Colletotrichum gloeosporioides	67.11	5.00e-62	228.00
IUUC-Cne-026864	Cryptococcus neoformans	69.80	4.00e-62	229.00
IUUC-Cme-027284	Cyanidioschyzon merolae	68.67	1.00e-57	215.00
IUUC-Dre-028774	Danio rerio	79.19	3.00e-72	263.00
IUUC-Dno-029661	Dasypus novemcinctus	76.51	5.00e-70	255.00
IUUC-Dor-030452	Dipodomys ordii	74.63	3.00e-61	226.00
IUUC-Dme-031863	Drosophila melanogaster	77.85	4.00e-71	259.00
IUUC-Ete-032595	Echinops telfairi	75.84	1.00e-69	254.00
IUUC-Eca-033562	Equus caballus	78.81	1.00e-70	258.00
IUUC-Eeu-035191	Erinaceus europaeus	60.93	6.00e-49	185.00
IUUC-Fca-036581	Felis catus	79.19	4.00e-72	262.00
IUUC-Fal-037474	Ficedula albicollis	77.59	6.00e-54	201.00
IUUC-Fox-037808	Fusarium oxysporum	67.11	7.00e-62	228.00
IUUC-Fso-038232	Fusarium solani	67.11	8.00e-62	228.00
IUUC-Gmo-038517	Gadus morhua	79.19	4.00e-72	262.00
IUUC-Gga-040588	Gallus gallus	79.19	4.00e-72	262.00
IUUC-Gac-041504	Gasterosteus aculeatus	78.52	1.00e-71	260.00
IUUC-Gma-043883	Glycine max	100.00	1.00e-88	317.00
IUUC-Ggo-044896	Gorilla gorilla	79.19	4.00e-72	262.00
IUUC-Hsa-046383	Homo sapiens	79.19	4.00e-72	262.00
IUUC-Hvu-047054	Hordeum vulgare	95.39	8.00e-86	308.00
IUUC-Itr-048507	Ictidomys tridecemlineatus	79.19	4.00e-72	262.00
IUUC-Lch-050415	Latimeria chalumnae	79.19	1.00e-72	264.00
IUUC-Lpe-051301	Leersia perrieri	98.03	2.00e-87	313.00
IUUC-Loc-051731	Lepisosteus oculatus	79.19	4.00e-72	262.00
IUUC-Laf-053680	Loxodonta africana	79.19	4.00e-72	262.00
IUUC-Mcc-055546	Macaca mulatta	79.19	2.00e-71	261.00
IUUC-Meu-056231	Macropus eugenii	79.19	4.00e-72	262.00
IUUC-Mtr-058305	Medicago truncatula	100.00	6.00e-89	318.00
IUUC-Mla-058876	Melampsora laricipopulina	69.33	4.00e-54	202.00
IUUC-Mga-059863	Meleagris gallopavo	73.72	5.00e-62	228.00
IUUC-Mvi-060330	Microbotryum violaceum	71.05	1.00e-55	208.00
IUUC-Mmr-060630	Microcebus murinus	76.51	5.00e-70	255.00
IUUC-Mdo-062292	Monodelphis domestica	79.19	4.00e-72	262.00
IUUC-Mmu-063680	Mus musculus	79.19	4.00e-72	262.00
IUUC-Mac-065428	Musa acuminata	98.03	5.00e-88	316.00
IUUC-Mpu-065803	Mustela putorius furo	76.51	5.00e-70	255.00
IUUC-Mlu-067147	Myotis lucifugus	76.51	5.00e-70	255.00
IUUC-Ncr-068913	Neurospora crassa	66.44	1.00e-61	228.00
IUUC-Nle-069121	Nomascus leucogenys	79.19	4.00e-72	262.00
IUUC-Opr-070935	Ochotona princeps	76.51	5.00e-70	255.00
IUUC-Ont-071335	Oreochromis niloticus	78.52	1.00e-71	260.00
IUUC-Oan-072706	Ornithorhynchus anatinus	70.55	5.00e-63	232.00
IUUC-Ocu-074550	Oryctolagus cuniculus	79.19	1.00e-71	262.00
IUUC-Oba-075847	Oryza barthii	98.03	7.00e-87	312.00
IUUC-Obr-076713	Oryza brachyantha	98.03	2.00e-87	313.00
IUUC-Ogl-076956	Oryza glaberrima	98.03	2.00e-87	313.00
IUUC-Ogu-078696	Oryza glumaepatula	98.03	2.00e-87	313.00
IUUC-Oin-080106	Oryza indica	98.03	2.00e-87	313.00
IUUC-Olo-081018	Oryza longistaminata	83.03	7.00e-75	272.00
IUUC-Ome-081285	Oryza meridionalis	98.03	2.00e-87	313.00
IUUC-Oni-082088	Oryza nivara	98.03	2.00e-87	313.00
IUUC-Opu-083310	Oryza punctata	98.03	2.00e-87	313.00
IUUC-Oru-084449	Oryza rufipogon	98.03	2.00e-87	313.00
IUUC-Osa-086191	Oryza sativa	98.03	2.00e-87	313.00
IUUC-Ola-086407	Oryzias latipes	79.19	4.00e-72	262.00
IUUC-Olu-087830	Ostreococcus lucimarinus	77.85	1.00e-62	231.00
IUUC-Oga-088659	Otolemur garnettii	79.19	4.00e-72	262.00
IUUC-Oar-090141	Ovis aries	76.51	5.00e-70	255.00
IUUC-Ptr-091305	Pan troglodytes	79.19	4.00e-72	262.00
IUUC-Pan-092740	Papio anubis	79.19	2.00e-71	261.00
IUUC-Psi-094094	Pelodiscus sinensis	79.19	4.00e-72	262.00
IUUC-Pma-094376	Petromyzon marinus	78.52	1.00e-71	261.00
IUUC-Pfo-096656	Poecilia formosa	78.52	7.00e-72	261.00
IUUC-Pab-097972	Pongo abelii	79.19	4.00e-72	262.00
IUUC-Pca-100906	Procavia capensis	75.84	7.00e-67	245.00
IUUC-Ppe-101949	Prunus persica	100.00	3.00e-88	317.00
IUUC-Pva-102380	Pteropus vampyrus	79.19	9.00e-71	258.00
IUUC-Pgr-103611	Puccinia graminis	69.13	2.00e-54	204.00
IUUC-Ptt-103971	Puccinia triticina	68.97	2.00e-40	156.00
IUUC-Rno-105772	Rattus norvegicus	76.51	2.00e-70	257.00
IUUC-Sce-106283	Saccharomyces cerevisiae	65.10	5.00e-60	222.00
IUUC-Sha-107650	Sarcophilus harrisii	75.84	9.00e-69	251.00
IUUC-Sja-107790	Schizosaccharomyces japonicus	71.52	7.00e-57	211.00
IUUC-Spo-108073	Schizosaccharomyces pombe	71.52	6.00e-57	212.00
IUUC-Ssl-108432	Sclerotinia sclerotiorum	67.79	2.00e-62	230.00
IUUC-Smo-109036	Selaginella moellendorffii	95.39	6.00e-86	308.00
IUUC-Sit-110731	Setaria italica	98.03	2.00e-87	313.00
IUUC-Sly-111506	Solanum lycopersicum	99.34	3.00e-88	316.00
IUUC-Stu-112080	Solanum tuberosum	99.34	3.00e-88	316.00
IUUC-Sar-113429	Sorex araneus	76.51	5.00e-70	255.00
IUUC-Sbi-114870	Sorghum bicolor	98.03	8.00e-88	314.00
IUUC-Sre-115106	Sporisorium reilianum	71.71	5.00e-57	212.00
IUUC-Ssc-116265	Sus scrofa	79.19	4.00e-72	262.00
IUUC-Tgu-117383	Taeniopygia guttata	79.19	4.00e-72	262.00
IUUC-Tru-118576	Takifugu rubripes	78.00	9.00e-71	258.00
IUUC-Tsy-119000	Tarsius syrichta	76.51	5.00e-70	255.00
IUUC-Tni-119745	Tetraodon nigroviridis	78.52	8.00e-71	258.00
IUUC-Tca-121827	Theobroma cacao	99.34	2.00e-88	316.00
IUUC-Tre-122002	Trichoderma reesei	67.11	1.00e-61	227.00
IUUC-Tvi-122331	Trichoderma virens	67.11	1.00e-61	227.00
IUUC-Tae-124461	Triticum aestivum	96.71	2.00e-87	315.00
IUUC-Tur-126866	Triticum urartu	97.37	4.00e-87	312.00
IUUC-Tbe-127921	Tupaia belangeri	74.50	1.00e-65	241.00
IUUC-Ttr-129050	Tursiops truncatus	78.52	3.00e-70	256.00
IUUC-Uma-129561	Ustilago maydis	71.71	3.00e-57	213.00
IUUC-Vda-129711	Verticillium dahliae	67.11	5.00e-62	228.00
IUUC-Vpa-130570	Vicugna pacos	71.64	5.00e-57	212.00
IUUC-Vvi-131547	Vitis vinifera	100.00	4.00e-89	319.00
IUUC-Xtr-132301	Xenopus tropicalis	79.19	4.00e-72	262.00
IUUC-Xma-133937	Xiphophorus maculatus	79.19	4.00e-72	262.00
IUUC-Yli-134660	Yarrowia lipolytica	64.00	6.00e-60	222.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence